RNA–Protein interactions for RNA: ENST00000317402.11

GEN1-201, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GEN1, Length 9,854 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-201ENST00000317402 GNL2Q13823 731 aaKnown RBP4.24□□□□□ -1.73
GEN1-201ENST00000317402 ELMO3Q96BJ8 720 aa4.24□□□□□ -1.73
GEN1-201ENST00000317402 PTPRMP28827 1452 aa4.24□□□□□ -1.73
GEN1-201ENST00000317402 CGNL1Q0VF96 1302 aa4.24□□□□□ -1.73
GEN1-201ENST00000317402 NFATC2IPQ8NCF5 419 aa4.23□□□□□ -1.73
GEN1-201ENST00000317402 RWDD1Q9H446 243 aaPredicted RBP4.23□□□□□ -1.73
GEN1-201ENST00000317402 KCNQ5Q9NR82 932 aa4.23□□□□□ -1.73
GEN1-201ENST00000317402 TTC21BQ7Z4L5 1316 aa4.23□□□□□ -1.73
GEN1-201ENST00000317402 KIF16BQ96L93 1317 aa4.23□□□□□ -1.73
GEN1-201ENST00000317402 A0A0D9SFI3 127 aa4.23□□□□□ -1.73
GEN1-201ENST00000317402 SASS6Q6UVJ0 657 aa4.23□□□□□ -1.73
GEN1-201ENST00000317402 STAMQ92783 540 aa4.23□□□□□ -1.73
GEN1-201ENST00000317402 DPF2Q92785 391 aa4.23□□□□□ -1.73
GEN1-201ENST00000317402 PHKBQ93100 1093 aa4.23□□□□□ -1.73
GEN1-201ENST00000317402 SUCLG2Q96I99 432 aa4.23□□□□□ -1.73
GEN1-201ENST00000317402 ZKSCAN3Q9BRR0 538 aa4.23□□□□□ -1.73
GEN1-201ENST00000317402 NLRP2Q9NX02 1062 aa4.23□□□□□ -1.73
GEN1-201ENST00000317402 TPCN1Q9ULQ1 816 aa4.23□□□□□ -1.73
GEN1-201ENST00000317402 DOCK1Q14185 1865 aa4.23□□□□□ -1.73
GEN1-201ENST00000317402 FMN2Q9NZ56 1722 aa4.23□□□□□ -1.73
GEN1-201ENST00000317402 VPS37CA5D8V6 355 aaPredicted RBP4.23□□□□□ -1.73
GEN1-201ENST00000317402 CCAR2Q8N163 923 aaKnown RBP4.23□□□□□ -1.73
GEN1-201ENST00000317402 DYNC1I1O14576 645 aa4.23□□□□□ -1.73
GEN1-201ENST00000317402 CHMP5Q9NZZ3 219 aa4.23□□□□□ -1.73
GEN1-201ENST00000317402 MYO6Q9UM54 1294 aa4.23□□□□□ -1.73
GEN1-201ENST00000317402 FREM1Q5H8C1 2179 aa4.23□□□□□ -1.73
GEN1-201ENST00000317402 USP54Q70EL1 1684 aa4.23□□□□□ -1.73
GEN1-201ENST00000317402 GRIN1Q05586 938 aa4.23□□□□□ -1.73
GEN1-201ENST00000317402 PHF23Q9BUL5 403 aaPredicted RBP4.23□□□□□ -1.73
GEN1-201ENST00000317402 ISY1Q9ULR0 285 aaKnown RBP4.23□□□□□ -1.73
GEN1-201ENST00000317402 WNT7AO00755 349 aa4.23□□□□□ -1.73
GEN1-201ENST00000317402 TSR1Q2NL82 804 aaKnown RBP4.23□□□□□ -1.73
GEN1-201ENST00000317402 RRP12Q5JTH9 1297 aaKnown RBP4.23□□□□□ -1.73
GEN1-201ENST00000317402 LARP1Q6PKG0 1096 aaKnown RBP4.23□□□□□ -1.73
GEN1-201ENST00000317402 KAZALD1Q96I82 304 aa4.23□□□□□ -1.73
GEN1-201ENST00000317402 TIMM10P62072 90 aa4.23□□□□□ -1.73
GEN1-201ENST00000317402 C11orf57Q6ZUT1 292 aaPredicted RBP4.23□□□□□ -1.73
GEN1-201ENST00000317402 KSR1Q8IVT5 923 aa4.23□□□□□ -1.73
GEN1-201ENST00000317402 RGS12O14924 1447 aa4.23□□□□□ -1.73
GEN1-201ENST00000317402 PLXND1Q9Y4D7 1925 aa4.23□□□□□ -1.73
GEN1-201ENST00000317402 MYOM1P52179 1685 aa4.23□□□□□ -1.73
GEN1-201ENST00000317402 PI4KAP2A4QPH2 592 aa4.23□□□□□ -1.73
GEN1-201ENST00000317402 PI4KAP1Q8N8J0 262 aa4.23□□□□□ -1.73
GEN1-201ENST00000317402 SHPRHQ149N8 1683 aa4.23□□□□□ -1.73
GEN1-201ENST00000317402 ABCC3O15438 1527 aa4.23□□□□□ -1.73
GEN1-201ENST00000317402 TPM1P09493 284 aa4.22□□□□□ -1.73
GEN1-201ENST00000317402 SCARF1Q14162 830 aa4.22□□□□□ -1.73
GEN1-201ENST00000317402 FMNL2Q96PY5 1086 aa4.22□□□□□ -1.73
GEN1-201ENST00000317402 SURF6O75683 361 aaKnown RBP4.22□□□□□ -1.73
GEN1-201ENST00000317402 PTPROQ16827 1216 aa4.22□□□□□ -1.73
GEN1-201ENST00000317402 WDR78Q5VTH9 848 aa4.22□□□□□ -1.73
GEN1-201ENST00000317402 HMMRO75330 724 aa4.22□□□□□ -1.73
GEN1-201ENST00000317402 VEGFAP15692 232 aaPredicted RBP4.22□□□□□ -1.73
GEN1-201ENST00000317402 HOXC9P31274 260 aa4.22□□□□□ -1.73
GEN1-201ENST00000317402 ME3Q16798 604 aa4.22□□□□□ -1.73
GEN1-201ENST00000317402 KRI1Q8N9T8 703 aaKnown RBP4.22□□□□□ -1.73
GEN1-201ENST00000317402 BCAS3Q9H6U6 928 aa4.22□□□□□ -1.73
GEN1-201ENST00000317402 FANCMQ8IYD8 2048 aa4.22□□□□□ -1.73
GEN1-201ENST00000317402 FAM205CA6NFA0 338 aa4.22□□□□□ -1.73
GEN1-201ENST00000317402 TMEM232C9JQI7 657 aa4.22□□□□□ -1.73
GEN1-201ENST00000317402 CDR1P51861 262 aa4.22□□□□□ -1.73
GEN1-201ENST00000317402 LRRC24Q50LG9 513 aa4.22□□□□□ -1.73
GEN1-201ENST00000317402 TTLL7Q6ZT98 887 aa4.22□□□□□ -1.73
GEN1-201ENST00000317402 SMC5Q8IY18 1101 aa4.22□□□□□ -1.73
GEN1-201ENST00000317402 MAP3K2Q9Y2U5 619 aa4.22□□□□□ -1.73
GEN1-201ENST00000317402 GTF2F1P35269 517 aaKnown RBP eCLIP4.22□□□□□ -1.73
GEN1-201ENST00000317402 NFE2L2Q16236 605 aa4.22□□□□□ -1.73
GEN1-201ENST00000317402 STOX1Q6ZVD7 989 aa4.22□□□□□ -1.73
GEN1-201ENST00000317402 RTF1Q92541 710 aaKnown RBP4.22□□□□□ -1.73
GEN1-201ENST00000317402 CEP170BQ9Y4F5 1589 aaPredicted RBP4.22□□□□□ -1.73
GEN1-201ENST00000317402 SLC30A10Q6XR72 485 aa4.22□□□□□ -1.73
GEN1-201ENST00000317402 ZSWIM4Q9H7M6 989 aa4.22□□□□□ -1.73
GEN1-201ENST00000317402 EP300Q09472 2414 aaPredicted RBP4.22□□□□□ -1.73
GEN1-201ENST00000317402 KIAA0754O94854 1291 aa4.22□□□□□ -1.73
GEN1-201ENST00000317402 CLCN1P35523 988 aa4.22□□□□□ -1.73
GEN1-201ENST00000317402 PDE1AP54750 535 aa4.22□□□□□ -1.73
GEN1-201ENST00000317402 PPP1R42Q7Z4L9 355 aa4.22□□□□□ -1.73
GEN1-201ENST00000317402 ZCCHC17Q9NP64 241 aaKnown RBP4.22□□□□□ -1.73
GEN1-201ENST00000317402 YTHDC2Q9H6S0 1430 aaKnown RBP4.22□□□□□ -1.73
GEN1-201ENST00000317402 ADGRB2O60241 1585 aa4.22□□□□□ -1.73
GEN1-201ENST00000317402 MNAT1P51948 309 aa4.21□□□□□ -1.73
GEN1-201ENST00000317402 HLFQ16534 295 aa4.21□□□□□ -1.73
GEN1-201ENST00000317402 NBPF9Q3BBW0 867 aa4.21□□□□□ -1.73
GEN1-201ENST00000317402 DDX46Q7L014 1031 aaKnown RBP4.21□□□□□ -1.73
GEN1-201ENST00000317402 SIGLEC1Q9BZZ2 1709 aa4.21□□□□□ -1.73
GEN1-201ENST00000317402 NMIQ13287 307 aaPredicted RBP4.21□□□□□ -1.74
GEN1-201ENST00000317402 HSP90B2PQ58FF3 399 aa4.21□□□□□ -1.74
GEN1-201ENST00000317402 CREBRFQ8IUR6 639 aa4.21□□□□□ -1.74
GEN1-201ENST00000317402 FEZ1Q99689 392 aa4.21□□□□□ -1.74
GEN1-201ENST00000317402 ACBD3Q9H3P7 528 aa4.21□□□□□ -1.74
GEN1-201ENST00000317402 BAZ2AQ9UIF9 1905 aaKnown RBP4.21□□□□□ -1.74
GEN1-201ENST00000317402 F5P12259 2224 aa4.21□□□□□ -1.74
GEN1-201ENST00000317402 SASH1O94885 1247 aa4.21□□□□□ -1.74
GEN1-201ENST00000317402 ENOX2Q16206 610 aaKnown RBP4.21□□□□□ -1.74
GEN1-201ENST00000317402 WWC2Q6AWC2 1192 aa4.21□□□□□ -1.74
GEN1-201ENST00000317402 DZIP1Q86YF9 867 aaKnown RBP4.21□□□□□ -1.74
GEN1-201ENST00000317402 TXLNBQ8N3L3 684 aa4.21□□□□□ -1.74
GEN1-201ENST00000317402 IRX2Q9BZI1 471 aaPredicted RBP4.21□□□□□ -1.74
GEN1-201ENST00000317402 XIRP2A4UGR9 3374 aa4.21□□□□□ -1.74
GEN1-201ENST00000317402 GOLGA6L19H0YKK7 550 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms