RNA–Protein interactions for RNA: ENST00000316105.6

PCDHB9-201, Transcript of protocadherin beta 9, humanhuman

APPRIS P1 BASIC

Gene PCDHB9, Length 4,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9-201ENST00000316105 CUL4AQ13619 759 aa15.6■□□□□ 0.09
PCDHB9-201ENST00000316105 CDC37L1Q7L3B6 337 aa15.6■□□□□ 0.09
PCDHB9-201ENST00000316105 SLC26A6Q9BXS9 759 aa15.6■□□□□ 0.09
PCDHB9-201ENST00000316105 ZKSCAN5Q9Y2L8 839 aa15.6■□□□□ 0.09
PCDHB9-201ENST00000316105 NCOA5Q9HCD5 579 aaKnown RBP15.59■□□□□ 0.09
PCDHB9-201ENST00000316105 ZBTB43O43298 467 aa15.59■□□□□ 0.09
PCDHB9-201ENST00000316105 TCIRG1Q13488 830 aa15.59■□□□□ 0.09
PCDHB9-201ENST00000316105 STX1AQ16623 288 aa15.59■□□□□ 0.09
PCDHB9-201ENST00000316105 UTP14AQ9BVJ6 771 aaKnown RBP15.59■□□□□ 0.09
PCDHB9-201ENST00000316105 TPCN1Q9ULQ1 816 aa15.59■□□□□ 0.09
PCDHB9-201ENST00000316105 JAK2O60674 1132 aa15.59■□□□□ 0.09
PCDHB9-201ENST00000316105 TYRO3Q06418 890 aa15.59■□□□□ 0.09
PCDHB9-201ENST00000316105 IQCA1Q86XH1 822 aa15.59■□□□□ 0.09
PCDHB9-201ENST00000316105 TXLNAP40222 546 aa15.59■□□□□ 0.09
PCDHB9-201ENST00000316105 LRRC24Q50LG9 513 aa15.59■□□□□ 0.09
PCDHB9-201ENST00000316105 ALG1Q9BT22 464 aa15.59■□□□□ 0.09
PCDHB9-201ENST00000316105 CYP27B1O15528 508 aa15.58■□□□□ 0.09
PCDHB9-201ENST00000316105 IGKV5-2P06315 115 aa15.58■□□□□ 0.09
PCDHB9-201ENST00000316105 MAP4K1Q92918 833 aa15.58■□□□□ 0.09
PCDHB9-201ENST00000316105 NCAPD2Q15021 1401 aa15.58■□□□□ 0.08
PCDHB9-201ENST00000316105 SMTNL1A8MU46 457 aa15.58■□□□□ 0.08
PCDHB9-201ENST00000316105 MAP7D2Q96T17 732 aa15.58■□□□□ 0.08
PCDHB9-201ENST00000316105 DNAJC25Q9H1X3 360 aa15.58■□□□□ 0.08
PCDHB9-201ENST00000316105 TTC12Q9H892 705 aaPredicted RBP15.58■□□□□ 0.08
PCDHB9-201ENST00000316105 ERBB4Q15303 1308 aa15.58■□□□□ 0.08
PCDHB9-201ENST00000316105 SLC4A4Q9Y6R1 1079 aa15.57■□□□□ 0.08
PCDHB9-201ENST00000316105 CYP7A1P22680 504 aa15.57■□□□□ 0.08
PCDHB9-201ENST00000316105 DZIP1Q86YF9 867 aaKnown RBP15.57■□□□□ 0.08
PCDHB9-201ENST00000316105 HAUS7Q99871 368 aa15.57■□□□□ 0.08
PCDHB9-201ENST00000316105 ANKIB1Q9P2G1 1089 aa15.57■□□□□ 0.08
PCDHB9-201ENST00000316105 ADCY9O60503 1353 aa15.57■□□□□ 0.08
PCDHB9-201ENST00000316105 RXRAP19793 462 aa15.57■□□□□ 0.08
PCDHB9-201ENST00000316105 CFAP100Q494V2 611 aa15.57■□□□□ 0.08
PCDHB9-201ENST00000316105 ANKRD18AQ8IVF6 992 aa15.57■□□□□ 0.08
PCDHB9-201ENST00000316105 MNS1Q8NEH6 495 aa15.57■□□□□ 0.08
PCDHB9-201ENST00000316105 APPBP2Q92624 585 aa15.57■□□□□ 0.08
PCDHB9-201ENST00000316105 MTX1Q13505 466 aa15.57■□□□□ 0.08
PCDHB9-201ENST00000316105 MTERF4Q7Z6M4 381 aaKnown RBP15.57■□□□□ 0.08
PCDHB9-201ENST00000316105 MAGEB6Q8N7X4 407 aa15.57■□□□□ 0.08
PCDHB9-201ENST00000316105 CCDC112Q8NEF3 446 aa15.57■□□□□ 0.08
PCDHB9-201ENST00000316105 DACH1Q9UI36 760 aa15.57■□□□□ 0.08
PCDHB9-201ENST00000316105 ZAP70P43403 619 aa15.56■□□□□ 0.08
PCDHB9-201ENST00000316105 ISM2Q6H9L7 571 aa15.56■□□□□ 0.08
PCDHB9-201ENST00000316105 ZNF589Q86UQ0 364 aaPredicted RBP15.56■□□□□ 0.08
PCDHB9-201ENST00000316105 MRPS27Q92552 414 aaKnown RBP15.56■□□□□ 0.08
PCDHB9-201ENST00000316105 GPAA1O43292 621 aa15.56■□□□□ 0.08
PCDHB9-201ENST00000316105 USP5P45974 858 aa15.56■□□□□ 0.08
PCDHB9-201ENST00000316105 WTAPQ15007 396 aa15.56■□□□□ 0.08
PCDHB9-201ENST00000316105 EPHA10Q5JZY3 1008 aa15.56■□□□□ 0.08
PCDHB9-201ENST00000316105 MTMR6Q9Y217 621 aa15.56■□□□□ 0.08
PCDHB9-201ENST00000316105 CEP170BQ9Y4F5 1589 aaPredicted RBP15.56■□□□□ 0.08
PCDHB9-201ENST00000316105 WDR17Q8IZU2 1322 aa15.56■□□□□ 0.08
PCDHB9-201ENST00000316105 TAF5LO75529 589 aa15.56■□□□□ 0.08
PCDHB9-201ENST00000316105 IPO7O95373 1038 aaKnown RBP15.56■□□□□ 0.08
PCDHB9-201ENST00000316105 CTCFLQ8NI51 663 aaPredicted RBP15.56■□□□□ 0.08
PCDHB9-201ENST00000316105 CEP131Q9UPN4 1083 aa15.56■□□□□ 0.08
PCDHB9-201ENST00000316105 PTPN12Q05209 780 aaKnown RBP15.55■□□□□ 0.08
PCDHB9-201ENST00000316105 HS1BP3Q53T59 392 aa15.55■□□□□ 0.08
PCDHB9-201ENST00000316105 SH3TC1Q8TE82 1336 aa15.55■□□□□ 0.08
PCDHB9-201ENST00000316105 CAVIN2O95810 425 aa15.55■□□□□ 0.08
PCDHB9-201ENST00000316105 MIGA1Q8NAN2 632 aa15.55■□□□□ 0.08
PCDHB9-201ENST00000316105 CNNM3Q8NE01 707 aa15.55■□□□□ 0.08
PCDHB9-201ENST00000316105 KCNG4Q8TDN1 519 aa15.55■□□□□ 0.08
PCDHB9-201ENST00000316105 FILIP1LQ4L180 1135 aa15.55■□□□□ 0.08
PCDHB9-201ENST00000316105 CBFA2T2O43439 604 aa15.54■□□□□ 0.08
PCDHB9-201ENST00000316105 MARCKSP29966 332 aaPredicted RBP15.54■□□□□ 0.08
PCDHB9-201ENST00000316105 AEBP2Q6ZN18 517 aaPredicted RBP15.54■□□□□ 0.08
PCDHB9-201ENST00000316105 KRT23Q9C075 422 aa15.54■□□□□ 0.08
PCDHB9-201ENST00000316105 PDE8AO60658 829 aa15.54■□□□□ 0.08
PCDHB9-201ENST00000316105 CATIPQ7Z7H3 387 aa15.54■□□□□ 0.08
PCDHB9-201ENST00000316105 PUS3Q9BZE2 481 aaKnown RBP15.54■□□□□ 0.08
PCDHB9-201ENST00000316105 ASAP1Q9ULH1 1129 aa15.54■□□□□ 0.08
PCDHB9-201ENST00000316105 NBPF5PQ86XG9 351 aaPredicted RBP15.54■□□□□ 0.08
PCDHB9-201ENST00000316105 ATP2B2Q01814 1243 aa15.54■□□□□ 0.08
PCDHB9-201ENST00000316105 LUZP1Q86V48 1076 aa15.54■□□□□ 0.08
PCDHB9-201ENST00000316105 MKNK2Q9HBH9 465 aa15.54■□□□□ 0.08
PCDHB9-201ENST00000316105 E7EWF7 191 aa15.53■□□□□ 0.08
PCDHB9-201ENST00000316105 SFPQP23246 707 aaKnown RBP eCLIP15.53■□□□□ 0.08
PCDHB9-201ENST00000316105 SLC4A8Q2Y0W8 1093 aa15.53■□□□□ 0.08
PCDHB9-201ENST00000316105 LEO1Q8WVC0 666 aaPredicted RBP15.53■□□□□ 0.08
PCDHB9-201ENST00000316105 GTF3C6Q969F1 213 aa15.53■□□□□ 0.08
PCDHB9-201ENST00000316105 DSCC1Q9BVC3 393 aa15.53■□□□□ 0.08
PCDHB9-201ENST00000316105 CARD10Q9BWT7 1032 aa15.53■□□□□ 0.08
PCDHB9-201ENST00000316105 CNNM2Q9H8M5 875 aa15.53■□□□□ 0.08
PCDHB9-201ENST00000316105 MBD4O95243 580 aa15.53■□□□□ 0.08
PCDHB9-201ENST00000316105 C16orf45Q96MC5 204 aaPredicted RBP15.53■□□□□ 0.08
PCDHB9-201ENST00000316105 LLPHQ9BRT6 129 aaKnown RBP15.53■□□□□ 0.08
PCDHB9-201ENST00000316105 SPTLC2O15270 562 aa15.53■□□□□ 0.08
PCDHB9-201ENST00000316105 LARGE1O95461 756 aa15.53■□□□□ 0.08
PCDHB9-201ENST00000316105 ZNF771Q7L3S4 317 aaPredicted RBP15.53■□□□□ 0.08
PCDHB9-201ENST00000316105 SMARCC1Q92922 1105 aaPredicted RBP15.53■□□□□ 0.08
PCDHB9-201ENST00000316105 B4E1Z4 1266 aa15.52■□□□□ 0.08
PCDHB9-201ENST00000316105 CLSTN1O94985 981 aa15.52■□□□□ 0.08
PCDHB9-201ENST00000316105 RTN1Q16799 776 aa15.52■□□□□ 0.08
PCDHB9-201ENST00000316105 CCDC186Q7Z3E2 898 aa15.52■□□□□ 0.08
PCDHB9-201ENST00000316105 SYKP43405 635 aa15.52■□□□□ 0.08
PCDHB9-201ENST00000316105 PUM3Q15397 648 aaKnown RBP15.52■□□□□ 0.08
PCDHB9-201ENST00000316105 TTLL5Q6EMB2 1281 aa15.52■□□□□ 0.08
PCDHB9-201ENST00000316105 OTUD7BQ6GQQ9 843 aa15.52■□□□□ 0.08
PCDHB9-201ENST00000316105 HEG1Q9ULI3 1381 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms