RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 NUCB2P80303 420 aa9.06□□□□□ -0.96
TRIM55-202ENST00000315962 FNBP4Q8N3X1 1017 aaPredicted RBP9.06□□□□□ -0.96
TRIM55-202ENST00000315962 PUS7LQ9H0K6 701 aaKnown RBP9.06□□□□□ -0.96
TRIM55-202ENST00000315962 TPCN1Q9ULQ1 816 aa9.06□□□□□ -0.96
TRIM55-202ENST00000315962 ISY1Q9ULR0 285 aaKnown RBP9.06□□□□□ -0.96
TRIM55-202ENST00000315962 CYP46A1Q9Y6A2 500 aa9.06□□□□□ -0.96
TRIM55-202ENST00000315962 COL14A1Q05707 1796 aaKnown RBP9.06□□□□□ -0.96
TRIM55-202ENST00000315962 JCADQ9P266 1359 aa9.06□□□□□ -0.96
TRIM55-202ENST00000315962 M0R2C6 588 aa9.06□□□□□ -0.96
TRIM55-202ENST00000315962 KDM4AO75164 1064 aa9.06□□□□□ -0.96
TRIM55-202ENST00000315962 CYP2E1P05181 493 aaPredicted RBP9.06□□□□□ -0.96
TRIM55-202ENST00000315962 FGD1P98174 961 aa9.06□□□□□ -0.96
TRIM55-202ENST00000315962 MCMDC2Q4G0Z9 681 aa9.06□□□□□ -0.96
TRIM55-202ENST00000315962 DNTTIP2Q5QJE6 756 aaKnown RBP9.06□□□□□ -0.96
TRIM55-202ENST00000315962 QTRT2Q9H974 415 aaKnown RBP9.06□□□□□ -0.96
TRIM55-202ENST00000315962 SLIT2O94813 1529 aa9.06□□□□□ -0.96
TRIM55-202ENST00000315962 TRIM37O94972 964 aa9.05□□□□□ -0.96
TRIM55-202ENST00000315962 PDE8BO95263 885 aa9.05□□□□□ -0.96
TRIM55-202ENST00000315962 APPP05067 770 aa9.05□□□□□ -0.96
TRIM55-202ENST00000315962 ANAPC15P60006 121 aa9.05□□□□□ -0.96
TRIM55-202ENST00000315962 ME3Q16798 604 aa9.05□□□□□ -0.96
TRIM55-202ENST00000315962 INCENPQ9NQS7 918 aa9.05□□□□□ -0.96
TRIM55-202ENST00000315962 DENND2AQ9ULE3 1009 aa9.05□□□□□ -0.96
TRIM55-202ENST00000315962 AFDNP55196 1824 aaKnown RBP9.05□□□□□ -0.96
TRIM55-202ENST00000315962 ERVV-1B6SEH8 477 aa9.05□□□□□ -0.96
TRIM55-202ENST00000315962 TPM2P07951 284 aa9.05□□□□□ -0.96
TRIM55-202ENST00000315962 ZNF445P59923 1031 aa9.05□□□□□ -0.96
TRIM55-202ENST00000315962 SLC9C2Q5TAH2 1124 aa9.05□□□□□ -0.96
TRIM55-202ENST00000315962 CCDC102BQ68D86 513 aa9.05□□□□□ -0.96
TRIM55-202ENST00000315962 GPHNQ9NQX3 736 aaPredicted RBP9.05□□□□□ -0.96
TRIM55-202ENST00000315962 LRRC4BQ9NT99 713 aa9.05□□□□□ -0.96
TRIM55-202ENST00000315962 LRP6O75581 1613 aa9.05□□□□□ -0.96
TRIM55-202ENST00000315962 FAM173BQ6P4H8 233 aa9.04□□□□□ -0.96
TRIM55-202ENST00000315962 FERMT3Q86UX7 667 aa9.04□□□□□ -0.96
TRIM55-202ENST00000315962 TTC14Q96N46 770 aa9.04□□□□□ -0.96
TRIM55-202ENST00000315962 LIMCH1Q9UPQ0 1083 aa9.04□□□□□ -0.96
TRIM55-202ENST00000315962 CIAO1O76071 339 aa9.04□□□□□ -0.96
TRIM55-202ENST00000315962 GYG1P46976 350 aa9.04□□□□□ -0.96
TRIM55-202ENST00000315962 BLOC1S2Q6QNY1 142 aa9.04□□□□□ -0.96
TRIM55-202ENST00000315962 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.04□□□□□ -0.96
TRIM55-202ENST00000315962 FAM196AQ6ZSG2 479 aa9.04□□□□□ -0.96
TRIM55-202ENST00000315962 ARHGEF1Q92888 912 aaKnown RBP9.04□□□□□ -0.96
TRIM55-202ENST00000315962 AKAP2Q9Y2D5 859 aa9.04□□□□□ -0.96
TRIM55-202ENST00000315962 ZPR1O75312 459 aa9.04□□□□□ -0.96
TRIM55-202ENST00000315962 NTSR2O95665 410 aa9.04□□□□□ -0.96
TRIM55-202ENST00000315962 HSPD1P10809 573 aaKnown RBP9.04□□□□□ -0.96
TRIM55-202ENST00000315962 HSP90B1P14625 803 aaKnown RBP9.04□□□□□ -0.96
TRIM55-202ENST00000315962 STOX1Q6ZVD7 989 aa9.04□□□□□ -0.96
TRIM55-202ENST00000315962 CELF1Q92879 486 aaKnown RBP9.04□□□□□ -0.96
TRIM55-202ENST00000315962 DDX11Q96FC9 970 aa9.04□□□□□ -0.96
TRIM55-202ENST00000315962 PIH1D3Q9NQM4 214 aaKnown RBP9.04□□□□□ -0.96
TRIM55-202ENST00000315962 ABCF2Q9UG63 623 aa9.04□□□□□ -0.96
TRIM55-202ENST00000315962 USP25Q9UHP3 1055 aa9.04□□□□□ -0.96
TRIM55-202ENST00000315962 ITGB4P16144 1822 aa9.04□□□□□ -0.96
TRIM55-202ENST00000315962 MAST3O60307 1309 aa9.03□□□□□ -0.96
TRIM55-202ENST00000315962 PLEKHG2Q9H7P9 1386 aa9.03□□□□□ -0.96
TRIM55-202ENST00000315962 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.03□□□□□ -0.96
TRIM55-202ENST00000315962 HIP1O00291 1037 aa9.03□□□□□ -0.96
TRIM55-202ENST00000315962 KLRK1P26718 216 aa9.03□□□□□ -0.96
TRIM55-202ENST00000315962 SLC4A8Q2Y0W8 1093 aa9.03□□□□□ -0.96
TRIM55-202ENST00000315962 NBPF5PQ86XG9 351 aaPredicted RBP9.03□□□□□ -0.96
TRIM55-202ENST00000315962 MIGA1Q8NAN2 632 aa9.03□□□□□ -0.96
TRIM55-202ENST00000315962 SMARCC1Q92922 1105 aaPredicted RBP9.03□□□□□ -0.96
TRIM55-202ENST00000315962 TTC12Q9H892 705 aaPredicted RBP9.03□□□□□ -0.96
TRIM55-202ENST00000315962 BCL2L12Q9HB09 334 aa9.03□□□□□ -0.96
TRIM55-202ENST00000315962 ZSWIM6Q9HCJ5 1215 aa9.03□□□□□ -0.96
TRIM55-202ENST00000315962 VPS37CA5D8V6 355 aaPredicted RBP9.03□□□□□ -0.96
TRIM55-202ENST00000315962 RNF113AO15541 343 aaKnown RBP9.03□□□□□ -0.96
TRIM55-202ENST00000315962 CCT2P78371 535 aaKnown RBP9.03□□□□□ -0.96
TRIM55-202ENST00000315962 CHRNDQ07001 517 aa9.03□□□□□ -0.96
TRIM55-202ENST00000315962 LRSAM1Q6UWE0 723 aa9.03□□□□□ -0.96
TRIM55-202ENST00000315962 NKX2-3Q8TAU0 364 aa9.03□□□□□ -0.96
TRIM55-202ENST00000315962 BRF1Q92994 677 aa9.03□□□□□ -0.96
TRIM55-202ENST00000315962 SETDB2Q96T68 719 aa9.03□□□□□ -0.96
TRIM55-202ENST00000315962 WWC3Q9ULE0 1092 aa9.03□□□□□ -0.96
TRIM55-202ENST00000315962 UBR2Q8IWV8 1755 aa9.02□□□□□ -0.96
TRIM55-202ENST00000315962 ST3GAL1Q11201 340 aa9.02□□□□□ -0.96
TRIM55-202ENST00000315962 RASGRF1Q13972 1273 aa9.02□□□□□ -0.96
TRIM55-202ENST00000315962 RNF20Q5VTR2 975 aa9.02□□□□□ -0.96
TRIM55-202ENST00000315962 Q6ZUG5 572 aa9.02□□□□□ -0.96
TRIM55-202ENST00000315962 VGLL2Q8N8G2 317 aa9.02□□□□□ -0.96
TRIM55-202ENST00000315962 PLA2G12BQ9BX93 195 aa9.02□□□□□ -0.96
TRIM55-202ENST00000315962 NCOA5Q9HCD5 579 aaKnown RBP9.02□□□□□ -0.96
TRIM55-202ENST00000315962 TFCP2L1Q9NZI6 479 aa9.02□□□□□ -0.96
TRIM55-202ENST00000315962 NOL7Q9UMY1 257 aaKnown RBP9.02□□□□□ -0.96
TRIM55-202ENST00000315962 ZKSCAN5Q9Y2L8 839 aa9.02□□□□□ -0.96
TRIM55-202ENST00000315962 RTCBQ9Y3I0 505 aaKnown RBP9.02□□□□□ -0.96
TRIM55-202ENST00000315962 DOT1LQ8TEK3 1739 aa9.02□□□□□ -0.97
TRIM55-202ENST00000315962 PTMSP20962 102 aa9.02□□□□□ -0.97
TRIM55-202ENST00000315962 GJB2P29033 226 aa9.02□□□□□ -0.97
TRIM55-202ENST00000315962 RFC4P35249 363 aa9.02□□□□□ -0.97
TRIM55-202ENST00000315962 IGHMBP2P38935 993 aaKnown RBP9.02□□□□□ -0.97
TRIM55-202ENST00000315962 CCDC152Q4G0S7 254 aa9.02□□□□□ -0.97
TRIM55-202ENST00000315962 GPR101Q96P66 508 aaPredicted RBP9.02□□□□□ -0.97
TRIM55-202ENST00000315962 NEK1Q96PY6 1258 aa9.02□□□□□ -0.97
TRIM55-202ENST00000315962 PDCL3Q9H2J4 239 aa9.02□□□□□ -0.97
TRIM55-202ENST00000315962 SMC3Q9UQE7 1217 aa9.02□□□□□ -0.97
TRIM55-202ENST00000315962 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.02□□□□□ -0.97
TRIM55-202ENST00000315962 PLCH1Q4KWH8 1693 aa9.02□□□□□ -0.97
TRIM55-202ENST00000315962 MED23Q9ULK4 1368 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms