RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 NCBP1Q09161 790 aaKnown RBP15.51■□□□□ 0.07
RFFL-201ENST00000315249 RNF113AO15541 343 aaKnown RBP15.51■□□□□ 0.07
RFFL-201ENST00000315249 JAKMIP3Q5VZ66 844 aa15.51■□□□□ 0.07
RFFL-201ENST00000315249 CCDC148Q8NFR7 591 aa15.51■□□□□ 0.07
RFFL-201ENST00000315249 TAF4BQ92750 862 aa15.51■□□□□ 0.07
RFFL-201ENST00000315249 GPCPD1Q9NPB8 672 aa15.51■□□□□ 0.07
RFFL-201ENST00000315249 WDR70Q9NW82 654 aa15.51■□□□□ 0.07
RFFL-201ENST00000315249 KLHDC4Q8TBB5 520 aa15.5■□□□□ 0.07
RFFL-201ENST00000315249 AATFQ9NY61 560 aaKnown RBP eCLIP15.5■□□□□ 0.07
RFFL-201ENST00000315249 UGGT1Q9NYU2 1555 aa15.5■□□□□ 0.07
RFFL-201ENST00000315249 PRC1O43663 620 aa15.5■□□□□ 0.07
RFFL-201ENST00000315249 MBD4O95243 580 aa15.5■□□□□ 0.07
RFFL-201ENST00000315249 NUCB1Q02818 461 aa15.5■□□□□ 0.07
RFFL-201ENST00000315249 GDPD2Q9HCC8 539 aa15.5■□□□□ 0.07
RFFL-201ENST00000315249 ZNF335Q9H4Z2 1342 aaPredicted RBP15.5■□□□□ 0.07
RFFL-201ENST00000315249 IL13P35225 146 aa15.5■□□□□ 0.07
RFFL-201ENST00000315249 SPA17Q15506 151 aa15.5■□□□□ 0.07
RFFL-201ENST00000315249 VPS36Q86VN1 386 aa15.5■□□□□ 0.07
RFFL-201ENST00000315249 ERCC4Q92889 916 aaPredicted RBP15.5■□□□□ 0.07
RFFL-201ENST00000315249 PKD2L1Q9P0L9 805 aa15.5■□□□□ 0.07
RFFL-201ENST00000315249 NPHP4O75161 1426 aaPredicted RBP15.5■□□□□ 0.07
RFFL-201ENST00000315249 C2CD5Q86YS7 1000 aa15.5■□□□□ 0.07
RFFL-201ENST00000315249 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.5■□□□□ 0.07
RFFL-201ENST00000315249 DNA2P51530 1060 aa15.5■□□□□ 0.07
RFFL-201ENST00000315249 TDRD12Q587J7 1177 aaKnown RBP15.5■□□□□ 0.07
RFFL-201ENST00000315249 TCIRG1Q13488 830 aa15.49■□□□□ 0.07
RFFL-201ENST00000315249 IVNS1ABPQ9Y6Y0 642 aa15.49■□□□□ 0.07
RFFL-201ENST00000315249 FLAD1Q8NFF5 587 aa15.49■□□□□ 0.07
RFFL-201ENST00000315249 RXRAP19793 462 aa15.49■□□□□ 0.07
RFFL-201ENST00000315249 ZNF496Q96IT1 587 aaPredicted RBP15.49■□□□□ 0.07
RFFL-201ENST00000315249 POLR3AO14802 1390 aaPredicted RBP15.49■□□□□ 0.07
RFFL-201ENST00000315249 BACH1O14867 736 aa15.49■□□□□ 0.07
RFFL-201ENST00000315249 BMP2KLQ5H9B9 411 aa15.49■□□□□ 0.07
RFFL-201ENST00000315249 ZNF771Q7L3S4 317 aaPredicted RBP15.49■□□□□ 0.07
RFFL-201ENST00000315249 ANO10Q9NW15 660 aa15.49■□□□□ 0.07
RFFL-201ENST00000315249 NOD1Q9Y239 953 aa15.49■□□□□ 0.07
RFFL-201ENST00000315249 ARHGEF10LQ9HCE6 1279 aa15.49■□□□□ 0.07
RFFL-201ENST00000315249 KRT27Q7Z3Y8 459 aa15.49■□□□□ 0.07
RFFL-201ENST00000315249 PHACTR2O75167 634 aa15.48■□□□□ 0.07
RFFL-201ENST00000315249 SH2D4AQ9H788 454 aa15.48■□□□□ 0.07
RFFL-201ENST00000315249 RBM25P49756 843 aaKnown RBP15.48■□□□□ 0.07
RFFL-201ENST00000315249 CPLX3Q8WVH0 158 aa15.48■□□□□ 0.07
RFFL-201ENST00000315249 ERVV-2B6SEH9 535 aa15.48■□□□□ 0.07
RFFL-201ENST00000315249 DLGAP5Q15398 846 aa15.48■□□□□ 0.07
RFFL-201ENST00000315249 CTNNBL1Q8WYA6 563 aaPredicted RBP15.48■□□□□ 0.07
RFFL-201ENST00000315249 EXOC1Q9NV70 894 aa15.48■□□□□ 0.07
RFFL-201ENST00000315249 AXDND1Q5T1B0 1012 aaPredicted RBP15.48■□□□□ 0.07
RFFL-201ENST00000315249 WDR66Q8TBY9 1149 aa15.48■□□□□ 0.07
RFFL-201ENST00000315249 CIZ1Q9ULV3 898 aaPredicted RBP15.48■□□□□ 0.07
RFFL-201ENST00000315249 PIK3C2GO75747 1445 aa15.48■□□□□ 0.07
RFFL-201ENST00000315249 STAT6P42226 847 aa15.48■□□□□ 0.07
RFFL-201ENST00000315249 FAM196AQ6ZSG2 479 aa15.48■□□□□ 0.07
RFFL-201ENST00000315249 STX6O43752 255 aa15.47■□□□□ 0.07
RFFL-201ENST00000315249 KCNQ4P56696 695 aa15.47■□□□□ 0.07
RFFL-201ENST00000315249 ARHGAP29Q52LW3 1261 aa15.47■□□□□ 0.07
RFFL-201ENST00000315249 NUP88Q99567 741 aaPredicted RBP15.47■□□□□ 0.07
RFFL-201ENST00000315249 TNNQ9UQP3 1299 aa15.47■□□□□ 0.07
RFFL-201ENST00000315249 AFMP43652 599 aa15.47■□□□□ 0.07
RFFL-201ENST00000315249 ZCCHC11Q5TAX3 1644 aaKnown RBP15.47■□□□□ 0.07
RFFL-201ENST00000315249 CEP85Q6P2H3 762 aa15.47■□□□□ 0.07
RFFL-201ENST00000315249 PCDHB15Q9Y5E8 787 aa15.47■□□□□ 0.07
RFFL-201ENST00000315249 KIAA0232Q92628 1395 aa15.47■□□□□ 0.07
RFFL-201ENST00000315249 GOLGA6L10A6NI86 522 aa15.47■□□□□ 0.07
RFFL-201ENST00000315249 GPHNQ9NQX3 736 aaPredicted RBP15.47■□□□□ 0.07
RFFL-201ENST00000315249 ATF5Q9Y2D1 282 aaPredicted RBP15.47■□□□□ 0.07
RFFL-201ENST00000315249 GTF2IP78347 998 aa15.46■□□□□ 0.07
RFFL-201ENST00000315249 ARMT1Q9H993 441 aa15.46■□□□□ 0.07
RFFL-201ENST00000315249 PARP1P09874 1014 aaKnown RBP15.46■□□□□ 0.07
RFFL-201ENST00000315249 DOK7Q18PE1 504 aa15.46■□□□□ 0.07
RFFL-201ENST00000315249 DPH6Q7L8W6 267 aa15.46■□□□□ 0.07
RFFL-201ENST00000315249 TARBP1Q13395 1621 aaKnown RBP15.46■□□□□ 0.07
RFFL-201ENST00000315249 MAST3O60307 1309 aa15.46■□□□□ 0.07
RFFL-201ENST00000315249 EYA2O00167 538 aa15.46■□□□□ 0.07
RFFL-201ENST00000315249 TAX1BP1Q86VP1 789 aa15.46■□□□□ 0.07
RFFL-201ENST00000315249 XAGE2Q96GT9 111 aa15.46■□□□□ 0.07
RFFL-201ENST00000315249 EFCAB6Q5THR3 1501 aa15.46■□□□□ 0.07
RFFL-201ENST00000315249 SMCR8Q8TEV9 937 aaPredicted RBP15.45■□□□□ 0.06
RFFL-201ENST00000315249 CTNNA2P26232 953 aa15.45■□□□□ 0.06
RFFL-201ENST00000315249 FCHSD1Q86WN1 690 aa15.45■□□□□ 0.06
RFFL-201ENST00000315249 AKNAD1Q5T1N1 836 aa15.45■□□□□ 0.06
RFFL-201ENST00000315249 ESYT1Q9BSJ8 1104 aa15.45■□□□□ 0.06
RFFL-201ENST00000315249 CPXCR1Q8N123 301 aa15.45■□□□□ 0.06
RFFL-201ENST00000315249 SYNCQ9H7C4 482 aa15.45■□□□□ 0.06
RFFL-201ENST00000315249 GBP2P32456 591 aaPredicted RBP15.45■□□□□ 0.06
RFFL-201ENST00000315249 ZNF354CQ86Y25 554 aa15.45■□□□□ 0.06
RFFL-201ENST00000315249 RTL9Q8NET4 1388 aa15.45■□□□□ 0.06
RFFL-201ENST00000315249 LRRC27Q9C0I9 530 aa15.44■□□□□ 0.06
RFFL-201ENST00000315249 PZPP20742 1482 aa15.44■□□□□ 0.06
RFFL-201ENST00000315249 LOC102724428A0A0B4J2F2 783 aa15.44■□□□□ 0.06
RFFL-201ENST00000315249 MCM4P33991 863 aa15.44■□□□□ 0.06
RFFL-201ENST00000315249 SIK1P57059 783 aa15.44■□□□□ 0.06
RFFL-201ENST00000315249 HSP90AA2PQ14568 343 aaPredicted RBP15.44■□□□□ 0.06
RFFL-201ENST00000315249 HOOK2Q96ED9 719 aa15.44■□□□□ 0.06
RFFL-201ENST00000315249 PHKG2P15735 406 aa15.44■□□□□ 0.06
RFFL-201ENST00000315249 GCC2Q8IWJ2 1684 aa15.44■□□□□ 0.06
RFFL-201ENST00000315249 KDM6BO15054 1643 aa15.44■□□□□ 0.06
RFFL-201ENST00000315249 MAPKBP1O60336 1514 aa15.44■□□□□ 0.06
RFFL-201ENST00000315249 PTPDC1A2A3K4 754 aa15.43■□□□□ 0.06
RFFL-201ENST00000315249 HDAC1Q13547 482 aaPredicted RBP15.43■□□□□ 0.06
RFFL-201ENST00000315249 PSMD1Q99460 953 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms