RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 AXIN2Q9Y2T1 843 aa15.72■□□□□ 0.11
SKA3-202ENST00000314759 PHRF1Q9P1Y6 1649 aaKnown RBP15.72■□□□□ 0.11
SKA3-202ENST00000314759 FBXO38Q6PIJ6 1188 aa15.72■□□□□ 0.11
SKA3-202ENST00000314759 NPHP1O15259 732 aa15.71■□□□□ 0.11
SKA3-202ENST00000314759 ME1P48163 572 aa15.71■□□□□ 0.11
SKA3-202ENST00000314759 EXOSC10Q01780 885 aaKnown RBP15.71■□□□□ 0.11
SKA3-202ENST00000314759 GUCY1B3Q02153 619 aa15.71■□□□□ 0.11
SKA3-202ENST00000314759 ANKRD13DQ6ZTN6 518 aa15.71■□□□□ 0.11
SKA3-202ENST00000314759 UBE3BQ7Z3V4 1068 aa15.71■□□□□ 0.11
SKA3-202ENST00000314759 KRT222Q8N1A0 295 aa15.71■□□□□ 0.11
SKA3-202ENST00000314759 FSIP1Q8NA03 581 aa15.71■□□□□ 0.11
SKA3-202ENST00000314759 CCDC9Q9Y3X0 531 aaKnown RBP15.71■□□□□ 0.11
SKA3-202ENST00000314759 SIPA1L3O60292 1781 aaPredicted RBP15.71■□□□□ 0.11
SKA3-202ENST00000314759 A0A0G2JLW4 131 aa15.71■□□□□ 0.11
SKA3-202ENST00000314759 ELF2Q15723 593 aa15.71■□□□□ 0.11
SKA3-202ENST00000314759 RABL6Q3YEC7 729 aaPredicted RBP15.71■□□□□ 0.11
SKA3-202ENST00000314759 CCAR2Q8N163 923 aaKnown RBP15.71■□□□□ 0.11
SKA3-202ENST00000314759 AOPEPQ8N6M6 819 aa15.71■□□□□ 0.11
SKA3-202ENST00000314759 KBTBD3Q8NAB2 608 aa15.71■□□□□ 0.11
SKA3-202ENST00000314759 ZNF397Q8NF99 534 aaPredicted RBP15.71■□□□□ 0.11
SKA3-202ENST00000314759 AGXT2Q9BYV1 514 aa15.71■□□□□ 0.11
SKA3-202ENST00000314759 SALL1Q9NSC2 1324 aa15.71■□□□□ 0.11
SKA3-202ENST00000314759 PIP4K2AP48426 406 aaPredicted RBP15.71■□□□□ 0.1
SKA3-202ENST00000314759 ATL3Q6DD88 541 aa15.71■□□□□ 0.1
SKA3-202ENST00000314759 FBXW7Q969H0 707 aa15.71■□□□□ 0.1
SKA3-202ENST00000314759 ZNF396Q96N95 335 aaPredicted RBP15.71■□□□□ 0.1
SKA3-202ENST00000314759 SH3TC1Q8TE82 1336 aa15.7■□□□□ 0.1
SKA3-202ENST00000314759 LRP10Q7Z4F1 713 aa15.7■□□□□ 0.1
SKA3-202ENST00000314759 CEP57L1Q8IYX8 460 aa15.7■□□□□ 0.1
SKA3-202ENST00000314759 ERICH4A6NGS2 130 aa15.7■□□□□ 0.1
SKA3-202ENST00000314759 NBPF11Q86T75 865 aa15.7■□□□□ 0.1
SKA3-202ENST00000314759 FMR1NBQ8N0W7 255 aaPredicted RBP15.7■□□□□ 0.1
SKA3-202ENST00000314759 PCDHA7Q9UN72 937 aa15.69■□□□□ 0.1
SKA3-202ENST00000314759 ERBB3P21860 1342 aa15.69■□□□□ 0.1
SKA3-202ENST00000314759 MYH15Q9Y2K3 1946 aa15.69■□□□□ 0.1
SKA3-202ENST00000314759 PDIA3P30101 505 aaKnown RBP15.69■□□□□ 0.1
SKA3-202ENST00000314759 NFATC2IPQ8NCF5 419 aa15.69■□□□□ 0.1
SKA3-202ENST00000314759 SLC52A2Q9HAB3 445 aa15.69■□□□□ 0.1
SKA3-202ENST00000314759 KCND1Q9NSA2 647 aa15.69■□□□□ 0.1
SKA3-202ENST00000314759 ZNF446Q9NWS9 450 aa15.69■□□□□ 0.1
SKA3-202ENST00000314759 FAM53CQ9NYF3 392 aa15.69■□□□□ 0.1
SKA3-202ENST00000314759 NAP1L2Q9ULW6 460 aaPredicted RBP15.69■□□□□ 0.1
SKA3-202ENST00000314759 CHST3Q7LGC8 479 aa15.68■□□□□ 0.1
SKA3-202ENST00000314759 ZNF496Q96IT1 587 aaPredicted RBP15.68■□□□□ 0.1
SKA3-202ENST00000314759 VGLL3A8MV65 326 aa15.68■□□□□ 0.1
SKA3-202ENST00000314759 E7EWF7 191 aa15.68■□□□□ 0.1
SKA3-202ENST00000314759 ATP5J2-PTCD1G3V325 749 aa15.68■□□□□ 0.1
SKA3-202ENST00000314759 GOLIM4O00461 696 aa15.68■□□□□ 0.1
SKA3-202ENST00000314759 PTCD1O75127 700 aaKnown RBP15.68■□□□□ 0.1
SKA3-202ENST00000314759 DSCC1Q9BVC3 393 aa15.68■□□□□ 0.1
SKA3-202ENST00000314759 LAMA4Q16363 1823 aa15.68■□□□□ 0.1
SKA3-202ENST00000314759 A0A1B0GVL5 298 aa15.67■□□□□ 0.1
SKA3-202ENST00000314759 MRPS27Q92552 414 aaKnown RBP15.67■□□□□ 0.1
SKA3-202ENST00000314759 SYTL4Q96C24 671 aaPredicted RBP15.67■□□□□ 0.1
SKA3-202ENST00000314759 SDF4Q9BRK5 362 aa15.67■□□□□ 0.1
SKA3-202ENST00000314759 NAT10Q9H0A0 1025 aaKnown RBP15.67■□□□□ 0.1
SKA3-202ENST00000314759 OSBPL5Q9H0X9 879 aaPredicted RBP15.67■□□□□ 0.1
SKA3-202ENST00000314759 HELLSQ9NRZ9 838 aa15.67■□□□□ 0.1
SKA3-202ENST00000314759 C5P01031 1676 aa15.67■□□□□ 0.1
SKA3-202ENST00000314759 A0A087WZG4 1122 aa15.67■□□□□ 0.1
SKA3-202ENST00000314759 FDPSP14324 419 aaKnown RBP15.67■□□□□ 0.1
SKA3-202ENST00000314759 CARMIL3Q8ND23 1372 aa15.67■□□□□ 0.1
SKA3-202ENST00000314759 HSPD1P10809 573 aaKnown RBP15.67■□□□□ 0.1
SKA3-202ENST00000314759 NDUFA8P51970 172 aa15.67■□□□□ 0.1
SKA3-202ENST00000314759 GSDMDP57764 484 aa15.67■□□□□ 0.1
SKA3-202ENST00000314759 IRX5P78411 483 aaPredicted RBP15.67■□□□□ 0.1
SKA3-202ENST00000314759 ADALQ6DHV7 355 aa15.67■□□□□ 0.1
SKA3-202ENST00000314759 LMOD2Q6P5Q4 547 aa15.67■□□□□ 0.1
SKA3-202ENST00000314759 ZNF274Q96GC6 653 aaPredicted RBP15.67■□□□□ 0.1
SKA3-202ENST00000314759 ERO1AQ96HE7 468 aa15.67■□□□□ 0.1
SKA3-202ENST00000314759 PAG1Q9NWQ8 432 aa15.67■□□□□ 0.1
SKA3-202ENST00000314759 PALLDQ8WX93 1383 aa15.66■□□□□ 0.1
SKA3-202ENST00000314759 DPCR1Q3MIW9 517 aa15.66■□□□□ 0.1
SKA3-202ENST00000314759 LRRN4CLQ8ND94 238 aa15.66■□□□□ 0.1
SKA3-202ENST00000314759 RTEL1Q9NZ71 1219 aa15.66■□□□□ 0.1
SKA3-202ENST00000314759 ADAMTS7Q9UKP4 1686 aa15.66■□□□□ 0.1
SKA3-202ENST00000314759 CASP7P55210 303 aa15.66■□□□□ 0.1
SKA3-202ENST00000314759 ZMYM1Q5SVZ6 1142 aa15.66■□□□□ 0.1
SKA3-202ENST00000314759 E4F1Q66K89 784 aaPredicted RBP15.66■□□□□ 0.1
SKA3-202ENST00000314759 LMBR1LQ6UX01 489 aa15.66■□□□□ 0.1
SKA3-202ENST00000314759 NEUROD6Q96NK8 337 aa15.66■□□□□ 0.1
SKA3-202ENST00000314759 OTUD7BQ6GQQ9 843 aa15.65■□□□□ 0.1
SKA3-202ENST00000314759 ORAI2Q96SN7 254 aa15.65■□□□□ 0.1
SKA3-202ENST00000314759 KIAA1468Q9P260 1216 aa15.65■□□□□ 0.1
SKA3-202ENST00000314759 KDM6AO15550 1401 aaPredicted RBP15.65■□□□□ 0.1
SKA3-202ENST00000314759 TIMM10P62072 90 aa15.65■□□□□ 0.1
SKA3-202ENST00000314759 LINC00301Q8NCQ3 95 aa15.65■□□□□ 0.1
SKA3-202ENST00000314759 IMPACTQ9P2X3 320 aa15.65■□□□□ 0.1
SKA3-202ENST00000314759 NEDD4P46934 1319 aa15.65■□□□□ 0.1
SKA3-202ENST00000314759 A0A1W2PQ27 194 aa15.64■□□□□ 0.09
SKA3-202ENST00000314759 A0A1W2PQ64 194 aa15.64■□□□□ 0.09
SKA3-202ENST00000314759 A0A1W2PQD8 194 aa15.64■□□□□ 0.09
SKA3-202ENST00000314759 SLU7O95391 586 aaKnown RBP15.64■□□□□ 0.09
SKA3-202ENST00000314759 XPO4Q9C0E2 1151 aaKnown RBP15.64■□□□□ 0.09
SKA3-202ENST00000314759 GPHNQ9NQX3 736 aaPredicted RBP15.64■□□□□ 0.09
SKA3-202ENST00000314759 CLIC4Q9Y696 253 aa15.64■□□□□ 0.09
SKA3-202ENST00000314759 TTLL5Q6EMB2 1281 aa15.64■□□□□ 0.09
SKA3-202ENST00000314759 ARMCX5Q6P1M9 558 aa15.64■□□□□ 0.09
SKA3-202ENST00000314759 ATG9AQ7Z3C6 839 aa15.64■□□□□ 0.09
SKA3-202ENST00000314759 LMTK3Q96Q04 1460 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 123.8 ms