RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 CCDC61Q9Y6R9 512 aa17.47■□□□□ 0.39
HCFC1-201ENST00000310441 ACTN4O43707 911 aaKnown RBP17.47■□□□□ 0.39
HCFC1-201ENST00000310441 SEL1L2Q5TEA6 688 aa17.47■□□□□ 0.39
HCFC1-201ENST00000310441 SLC12A5Q9H2X9 1139 aa17.47■□□□□ 0.39
HCFC1-201ENST00000310441 IRX4P78413 519 aa17.47■□□□□ 0.39
HCFC1-201ENST00000310441 TAOK1Q7L7X3 1001 aa17.47■□□□□ 0.39
HCFC1-201ENST00000310441 ORC3Q9UBD5 711 aaPredicted RBP17.47■□□□□ 0.39
HCFC1-201ENST00000310441 UQCRFS1P1P0C7P4 283 aa17.47■□□□□ 0.39
HCFC1-201ENST00000310441 SEC62Q99442 399 aaKnown RBP17.47■□□□□ 0.39
HCFC1-201ENST00000310441 CCT2P78371 535 aaKnown RBP17.47■□□□□ 0.39
HCFC1-201ENST00000310441 VWA3BQ502W6 1294 aa17.47■□□□□ 0.39
HCFC1-201ENST00000310441 CACYBPQ9HB71 228 aaKnown RBP17.47■□□□□ 0.39
HCFC1-201ENST00000310441 GIPC1O14908 333 aa17.47■□□□□ 0.39
HCFC1-201ENST00000310441 EEF2P13639 858 aaKnown RBP17.47■□□□□ 0.39
HCFC1-201ENST00000310441 TRIM14Q14142 442 aa17.47■□□□□ 0.39
HCFC1-201ENST00000310441 PPP1R42Q7Z4L9 355 aa17.47■□□□□ 0.39
HCFC1-201ENST00000310441 CCDC62Q6P9F0 684 aa17.47■□□□□ 0.39
HCFC1-201ENST00000310441 STK24Q9Y6E0 443 aa17.47■□□□□ 0.39
HCFC1-201ENST00000310441 IQGAP2Q13576 1575 aa17.46■□□□□ 0.39
HCFC1-201ENST00000310441 TSPY3P0CV98 308 aa17.46■□□□□ 0.39
HCFC1-201ENST00000310441 TSPY8P0CW00 308 aa17.46■□□□□ 0.39
HCFC1-201ENST00000310441 GNAT2P19087 354 aa17.46■□□□□ 0.39
HCFC1-201ENST00000310441 HS2ST1Q7LGA3 356 aa17.46■□□□□ 0.39
HCFC1-201ENST00000310441 SELENOSQ9BQE4 189 aa17.46■□□□□ 0.39
HCFC1-201ENST00000310441 RPL13P26373 211 aaKnown RBP17.46■□□□□ 0.39
HCFC1-201ENST00000310441 SLC8A3P57103 927 aa17.46■□□□□ 0.39
HCFC1-201ENST00000310441 RRAGBQ5VZM2 374 aa17.46■□□□□ 0.39
HCFC1-201ENST00000310441 SLC26A6Q9BXS9 759 aa17.46■□□□□ 0.39
HCFC1-201ENST00000310441 MRVI1Q9Y6F6 885 aa17.46■□□□□ 0.39
HCFC1-201ENST00000310441 MRPS27Q92552 414 aaKnown RBP17.46■□□□□ 0.39
HCFC1-201ENST00000310441 GBP7Q8N8V2 638 aaPredicted RBP17.46■□□□□ 0.39
HCFC1-201ENST00000310441 SATB1Q01826 763 aa17.45■□□□□ 0.38
HCFC1-201ENST00000310441 SPDYE3A6NKU9 549 aa17.45■□□□□ 0.38
HCFC1-201ENST00000310441 RTL1A6NKG5 1358 aa17.45■□□□□ 0.38
HCFC1-201ENST00000310441 ANO6Q4KMQ2 910 aa17.45■□□□□ 0.38
HCFC1-201ENST00000310441 FRMD4BQ9Y2L6 1034 aa17.45■□□□□ 0.38
HCFC1-201ENST00000310441 CTTNBP2Q8WZ74 1663 aa17.45■□□□□ 0.38
HCFC1-201ENST00000310441 ZNF853P0CG23 659 aa17.45■□□□□ 0.38
HCFC1-201ENST00000310441 NEDD9Q14511 834 aa17.45■□□□□ 0.38
HCFC1-201ENST00000310441 UTP11Q9Y3A2 253 aaKnown RBP17.45■□□□□ 0.38
HCFC1-201ENST00000310441 RASSF2P50749 326 aa17.45■□□□□ 0.38
HCFC1-201ENST00000310441 ZBTB43O43298 467 aa17.45■□□□□ 0.38
HCFC1-201ENST00000310441 TRMT112Q9UI30 125 aaKnown RBP17.45■□□□□ 0.38
HCFC1-201ENST00000310441 ARHGAP25P42331 645 aa17.45■□□□□ 0.38
HCFC1-201ENST00000310441 RTN1Q16799 776 aa17.44■□□□□ 0.38
HCFC1-201ENST00000310441 RILPL1Q5EBL4 403 aa17.44■□□□□ 0.38
HCFC1-201ENST00000310441 UBL4BQ8N7F7 174 aa17.44■□□□□ 0.38
HCFC1-201ENST00000310441 FAM13AO94988 1023 aa17.44■□□□□ 0.38
HCFC1-201ENST00000310441 ST5P78524 1137 aa17.44■□□□□ 0.38
HCFC1-201ENST00000310441 VCX3AQ9NNX9 186 aa17.44■□□□□ 0.38
HCFC1-201ENST00000310441 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.44■□□□□ 0.381e-6■■□□□ 12.6
HCFC1-201ENST00000310441 PLCB3Q01970 1234 aa17.44■□□□□ 0.38
HCFC1-201ENST00000310441 GUCY1B3Q02153 619 aa17.44■□□□□ 0.38
HCFC1-201ENST00000310441 MAP3K21Q5TCX8 1036 aa17.44■□□□□ 0.38
HCFC1-201ENST00000310441 NOLC1Q14978 699 aaKnown RBP eCLIP17.44■□□□□ 0.38
HCFC1-201ENST00000310441 NAP1L4Q99733 375 aaKnown RBP17.44■□□□□ 0.38
HCFC1-201ENST00000310441 PLCB1Q9NQ66 1216 aa17.44■□□□□ 0.38
HCFC1-201ENST00000310441 RABGAP1Q9Y3P9 1069 aa17.44■□□□□ 0.38
HCFC1-201ENST00000310441 DNAI1Q9UI46 699 aa17.43■□□□□ 0.38
HCFC1-201ENST00000310441 PLCG2P16885 1265 aa17.43■□□□□ 0.38
HCFC1-201ENST00000310441 RAB11FIP4Q86YS3 637 aa17.43■□□□□ 0.38
HCFC1-201ENST00000310441 RASSF4Q9H2L5 321 aa17.43■□□□□ 0.38
HCFC1-201ENST00000310441 TROQ12816 1431 aaPredicted RBP17.43■□□□□ 0.38
HCFC1-201ENST00000310441 IL16Q14005 1332 aa17.43■□□□□ 0.38
HCFC1-201ENST00000310441 GNA11P29992 359 aa17.43■□□□□ 0.38
HCFC1-201ENST00000310441 MYD88Q99836 296 aa17.43■□□□□ 0.38
HCFC1-201ENST00000310441 TACC3Q9Y6A5 838 aa17.43■□□□□ 0.38
HCFC1-201ENST00000310441 ATP2C2O75185 946 aa17.43■□□□□ 0.38
HCFC1-201ENST00000310441 RARSP54136 660 aaKnown RBP17.43■□□□□ 0.38
HCFC1-201ENST00000310441 CEP85LQ5SZL2 805 aa17.43■□□□□ 0.38
HCFC1-201ENST00000310441 CETN3O15182 167 aa17.43■□□□□ 0.38
HCFC1-201ENST00000310441 GEN1Q17RS7 908 aa17.43■□□□□ 0.38
HCFC1-201ENST00000310441 TBC1D9Q6ZT07 1266 aa17.43■□□□□ 0.38
HCFC1-201ENST00000310441 TBC1D2Q9BYX2 928 aa17.43■□□□□ 0.38
HCFC1-201ENST00000310441 TMX1Q9H3N1 280 aa17.43■□□□□ 0.38
HCFC1-201ENST00000310441 A0A1B0GUL7 405 aa17.42■□□□□ 0.38
HCFC1-201ENST00000310441 BRAPQ7Z569 592 aa17.42■□□□□ 0.38
HCFC1-201ENST00000310441 SSFA2P28290 1259 aa17.42■□□□□ 0.38
HCFC1-201ENST00000310441 ASIC1P78348 528 aa17.42■□□□□ 0.38
HCFC1-201ENST00000310441 RRS1Q15050 365 aaKnown RBP17.42■□□□□ 0.38
HCFC1-201ENST00000310441 CCDC152Q4G0S7 254 aa17.42■□□□□ 0.38
HCFC1-201ENST00000310441 PFDN4Q9NQP4 134 aa17.42■□□□□ 0.38
HCFC1-201ENST00000310441 UBXN1Q04323 297 aa17.42■□□□□ 0.38
HCFC1-201ENST00000310441 PPFIA1Q13136 1202 aa17.42■□□□□ 0.38
HCFC1-201ENST00000310441 HVCN1Q96D96 273 aa17.42■□□□□ 0.38
HCFC1-201ENST00000310441 SNAPC4Q5SXM2 1469 aa17.42■□□□□ 0.38
HCFC1-201ENST00000310441 CLCN1P35523 988 aa17.42■□□□□ 0.38
HCFC1-201ENST00000310441 UBE2Q2Q8WVN8 375 aa17.42■□□□□ 0.38
HCFC1-201ENST00000310441 RUSC2Q8N2Y8 1516 aa17.42■□□□□ 0.38
HCFC1-201ENST00000310441 ZEB2O60315 1214 aa17.41■□□□□ 0.38
HCFC1-201ENST00000310441 ZSWIM4Q9H7M6 989 aa17.41■□□□□ 0.38
HCFC1-201ENST00000310441 NAA25Q14CX7 972 aa17.41■□□□□ 0.38
HCFC1-201ENST00000310441 ZHX1Q9UKY1 873 aaPredicted RBP17.41■□□□□ 0.38
HCFC1-201ENST00000310441 VPS18Q9P253 973 aa17.41■□□□□ 0.38
HCFC1-201ENST00000310441 I3L4J1 428 aa17.41■□□□□ 0.38
HCFC1-201ENST00000310441 SSH1Q8WYL5 1049 aa17.41■□□□□ 0.38
HCFC1-201ENST00000310441 PCK1P35558 622 aa17.4■□□□□ 0.38
HCFC1-201ENST00000310441 TTC22Q5TAA0 569 aa17.4■□□□□ 0.38
HCFC1-201ENST00000310441 ZNF710Q8N1W2 664 aa17.4■□□□□ 0.38
HCFC1-201ENST00000310441 TTC36A6NLP5 189 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms