RNA–Protein interactions for RNA: ENST00000309862.10

PGAP3-202, Transcript of post-GPI attachment to proteins 3, humanhuman

TSL 2

Gene PGAP3, Length 3,028 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP3-202ENST00000309862 TMC6Q7Z403 805 aa18.05■□□□□ 0.48
PGAP3-202ENST00000309862 GOLIM4O00461 696 aa18.05■□□□□ 0.48
PGAP3-202ENST00000309862 GORABQ5T7V8 394 aa18.05■□□□□ 0.48
PGAP3-202ENST00000309862 SYT10Q6XYQ8 523 aa18.05■□□□□ 0.48
PGAP3-202ENST00000309862 GJB4Q9NTQ9 266 aa18.05■□□□□ 0.48
PGAP3-202ENST00000309862 IFNKQ9P0W0 207 aa18.05■□□□□ 0.48
PGAP3-202ENST00000309862 JCADQ9P266 1359 aa18.04■□□□□ 0.48
PGAP3-202ENST00000309862 SLU7O95391 586 aaKnown RBP18.04■□□□□ 0.48
PGAP3-202ENST00000309862 NDUFA8P51970 172 aa18.04■□□□□ 0.48
PGAP3-202ENST00000309862 GABPB1Q06547 395 aaPredicted RBP18.04■□□□□ 0.48
PGAP3-202ENST00000309862 XPO4Q9C0E2 1151 aaKnown RBP18.04■□□□□ 0.48
PGAP3-202ENST00000309862 TERF2Q15554 542 aa18.04■□□□□ 0.48
PGAP3-202ENST00000309862 ESCO1Q5FWF5 840 aa18.04■□□□□ 0.48
PGAP3-202ENST00000309862 NAA16Q6N069 864 aaPredicted RBP18.04■□□□□ 0.48
PGAP3-202ENST00000309862 ERO1AQ96HE7 468 aa18.04■□□□□ 0.48
PGAP3-202ENST00000309862 ZNF396Q96N95 335 aaPredicted RBP18.04■□□□□ 0.48
PGAP3-202ENST00000309862 ERBB3P21860 1342 aa18.04■□□□□ 0.48
PGAP3-202ENST00000309862 SF3A1Q15459 793 aaKnown RBP18.04■□□□□ 0.48
PGAP3-202ENST00000309862 ZRSR1Q15695 479 aaKnown RBP18.04■□□□□ 0.48
PGAP3-202ENST00000309862 E4F1Q66K89 784 aaPredicted RBP18.04■□□□□ 0.48
PGAP3-202ENST00000309862 ZBTB22O15209 634 aa18.03■□□□□ 0.48
PGAP3-202ENST00000309862 PTPN21Q16825 1174 aa18.03■□□□□ 0.48
PGAP3-202ENST00000309862 AMOTQ4VCS5 1084 aa18.03■□□□□ 0.48
PGAP3-202ENST00000309862 MED1Q15648 1581 aaPredicted RBP18.03■□□□□ 0.48
PGAP3-202ENST00000309862 TTLL5Q6EMB2 1281 aa18.03■□□□□ 0.48
PGAP3-202ENST00000309862 ZNF446Q9NWS9 450 aa18.03■□□□□ 0.48
PGAP3-202ENST00000309862 KDM3BQ7LBC6 1761 aa18.03■□□□□ 0.48
PGAP3-202ENST00000309862 CLIC4Q9Y696 253 aa18.02■□□□□ 0.48
PGAP3-202ENST00000309862 TIMM10P62072 90 aa18.02■□□□□ 0.48
PGAP3-202ENST00000309862 ARMCX5Q6P1M9 558 aa18.02■□□□□ 0.48
PGAP3-202ENST00000309862 FMR1NBQ8N0W7 255 aaPredicted RBP18.02■□□□□ 0.48
PGAP3-202ENST00000309862 MRPS27Q92552 414 aaKnown RBP18.02■□□□□ 0.48
PGAP3-202ENST00000309862 LLPHQ9BRT6 129 aaKnown RBP18.02■□□□□ 0.48
PGAP3-202ENST00000309862 NAT10Q9H0A0 1025 aaKnown RBP18.02■□□□□ 0.48
PGAP3-202ENST00000309862 RFX5P48382 616 aaPredicted RBP18.01■□□□□ 0.47
PGAP3-202ENST00000309862 COPRSQ9NQ92 184 aa18.01■□□□□ 0.47
PGAP3-202ENST00000309862 PDIA3P30101 505 aaKnown RBP18.01■□□□□ 0.47
PGAP3-202ENST00000309862 ANKRD24Q8TF21 1146 aa18.01■□□□□ 0.47
PGAP3-202ENST00000309862 PPP1R13BQ96KQ4 1090 aa18.01■□□□□ 0.47
PGAP3-202ENST00000309862 HAUS7Q99871 368 aa18.01■□□□□ 0.47
PGAP3-202ENST00000309862 MARF1Q9Y4F3 1742 aaKnown RBP18.01■□□□□ 0.47
PGAP3-202ENST00000309862 RGPD2P0DJD1 1756 aa18.01■□□□□ 0.47
PGAP3-202ENST00000309862 E7EWF7 191 aa18.01■□□□□ 0.47
PGAP3-202ENST00000309862 LMOD1P29536 600 aaPredicted RBP18.01■□□□□ 0.47
PGAP3-202ENST00000309862 STK38Q15208 465 aa18.01■□□□□ 0.47
PGAP3-202ENST00000309862 HAND2P61296 217 aa18■□□□□ 0.47
PGAP3-202ENST00000309862 ANKRD13DQ6ZTN6 518 aa18■□□□□ 0.47
PGAP3-202ENST00000309862 HOMER1Q86YM7 354 aa18■□□□□ 0.47
PGAP3-202ENST00000309862 NFATC2IPQ8NCF5 419 aa18■□□□□ 0.47
PGAP3-202ENST00000309862 METTL22Q9BUU2 404 aaPredicted RBP18■□□□□ 0.47
PGAP3-202ENST00000309862 HEG1Q9ULI3 1381 aa18■□□□□ 0.47
PGAP3-202ENST00000309862 FDPSP14324 419 aaKnown RBP18■□□□□ 0.47
PGAP3-202ENST00000309862 ZNF790Q6PG37 636 aa18■□□□□ 0.47
PGAP3-202ENST00000309862 KBTBD3Q8NAB2 608 aa18■□□□□ 0.47
PGAP3-202ENST00000309862 AXIN2Q9Y2T1 843 aa18■□□□□ 0.47
PGAP3-202ENST00000309862 A0A087WZG4 1122 aa17.99■□□□□ 0.47
PGAP3-202ENST00000309862 SFPQP23246 707 aaKnown RBP eCLIP17.99■□□□□ 0.47
PGAP3-202ENST00000309862 GSDMDP57764 484 aa17.99■□□□□ 0.47
PGAP3-202ENST00000309862 KIAA1468Q9P260 1216 aa17.99■□□□□ 0.47
PGAP3-202ENST00000309862 EXOSC10Q01780 885 aaKnown RBP17.99■□□□□ 0.47
PGAP3-202ENST00000309862 LTN1O94822 1766 aa17.99■□□□□ 0.47
PGAP3-202ENST00000309862 GCP02774 474 aa17.98■□□□□ 0.47
PGAP3-202ENST00000309862 GOLGA8FQ08AF8 430 aa17.98■□□□□ 0.47
PGAP3-202ENST00000309862 GOLGA8DPQ0D2H9 430 aa17.98■□□□□ 0.47
PGAP3-202ENST00000309862 LMBR1LQ6UX01 489 aa17.98■□□□□ 0.47
PGAP3-202ENST00000309862 CARMIL3Q8ND23 1372 aa17.98■□□□□ 0.47
PGAP3-202ENST00000309862 HMGB1P09429 215 aaKnown RBP17.98■□□□□ 0.47
PGAP3-202ENST00000309862 HSPD1P10809 573 aaKnown RBP17.98■□□□□ 0.47
PGAP3-202ENST00000309862 ATP1A3P13637 1013 aa17.98■□□□□ 0.47
PGAP3-202ENST00000309862 ZNF496Q96IT1 587 aaPredicted RBP17.98■□□□□ 0.47
PGAP3-202ENST00000309862 OSBPL5Q9H0X9 879 aaPredicted RBP17.98■□□□□ 0.47
PGAP3-202ENST00000309862 PAG1Q9NWQ8 432 aa17.98■□□□□ 0.47
PGAP3-202ENST00000309862 ADALQ6DHV7 355 aa17.97■□□□□ 0.47
PGAP3-202ENST00000309862 KCNH5Q8NCM2 988 aa17.97■□□□□ 0.47
PGAP3-202ENST00000309862 LINC00301Q8NCQ3 95 aa17.97■□□□□ 0.47
PGAP3-202ENST00000309862 DNAI1Q9UI46 699 aa17.97■□□□□ 0.47
PGAP3-202ENST00000309862 SLC3A2P08195 630 aaKnown RBP17.96■□□□□ 0.47
PGAP3-202ENST00000309862 MARCKSP29966 332 aaPredicted RBP17.96■□□□□ 0.47
PGAP3-202ENST00000309862 ARHGAP29Q52LW3 1261 aa17.96■□□□□ 0.47
PGAP3-202ENST00000309862 FAM177A1Q8N128 213 aaPredicted RBP17.96■□□□□ 0.47
PGAP3-202ENST00000309862 ANKARQ7Z5J8 1434 aa17.96■□□□□ 0.47
PGAP3-202ENST00000309862 HSP90AB3PQ58FF7 597 aa17.96■□□□□ 0.47
PGAP3-202ENST00000309862 CLCN6P51797 869 aa17.96■□□□□ 0.46
PGAP3-202ENST00000309862 RTEL1Q9NZ71 1219 aa17.96■□□□□ 0.46
PGAP3-202ENST00000309862 SALL1Q9NSC2 1324 aa17.96■□□□□ 0.46
PGAP3-202ENST00000309862 ZNF202O95125 648 aa17.95■□□□□ 0.46
PGAP3-202ENST00000309862 C8orf76Q96K31 380 aa17.95■□□□□ 0.46
PGAP3-202ENST00000309862 TMX1Q9H3N1 280 aa17.95■□□□□ 0.46
PGAP3-202ENST00000309862 SLIT1O75093 1534 aa17.95■□□□□ 0.46
PGAP3-202ENST00000309862 SPTLC2O15270 562 aa17.95■□□□□ 0.46
PGAP3-202ENST00000309862 HSP90AA4PQ58FG1 418 aa17.95■□□□□ 0.46
PGAP3-202ENST00000309862 THEMISQ8N1K5 641 aaPredicted RBP17.95■□□□□ 0.46
PGAP3-202ENST00000309862 ZNF594Q96JF6 807 aaPredicted RBP17.94■□□□□ 0.46
PGAP3-202ENST00000309862 EPC1Q9H2F5 836 aa17.94■□□□□ 0.46
PGAP3-202ENST00000309862 IMPACTQ9P2X3 320 aa17.94■□□□□ 0.46
PGAP3-202ENST00000309862 NCAPD2Q15021 1401 aa17.94■□□□□ 0.46
PGAP3-202ENST00000309862 ARHGEF25Q86VW2 580 aa17.94■□□□□ 0.46
PGAP3-202ENST00000309862 DPF2Q92785 391 aa17.94■□□□□ 0.46
PGAP3-202ENST00000309862 L2HGDHQ9H9P8 463 aa17.94■□□□□ 0.46
PGAP3-202ENST00000309862 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms