RNA–Protein interactions for RNA: ENST00000309263.7

SCUBE2-201, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 5 BASIC

Gene SCUBE2, Length 3,727 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-201ENST00000309263 COPS6Q7L5N1 327 aa16.75■□□□□ 0.27
SCUBE2-201ENST00000309263 DHX40Q8IX18 779 aaKnown RBP16.75■□□□□ 0.27
SCUBE2-201ENST00000309263 ZSWIM4Q9H7M6 989 aa16.75■□□□□ 0.27
SCUBE2-201ENST00000309263 CTAGE5O15320 804 aa16.74■□□□□ 0.27
SCUBE2-201ENST00000309263 ALDH1L1O75891 902 aa16.74■□□□□ 0.27
SCUBE2-201ENST00000309263 CFAP100Q494V2 611 aa16.74■□□□□ 0.27
SCUBE2-201ENST00000309263 SYNE3Q6ZMZ3 975 aa16.74■□□□□ 0.27
SCUBE2-201ENST00000309263 KAZALD1Q96I82 304 aa16.74■□□□□ 0.27
SCUBE2-201ENST00000309263 CHMP4AQ9BY43 222 aa16.74■□□□□ 0.27
SCUBE2-201ENST00000309263 NDUFA8P51970 172 aa16.74■□□□□ 0.27
SCUBE2-201ENST00000309263 RBM6P78332 1123 aaKnown RBP16.74■□□□□ 0.27
SCUBE2-201ENST00000309263 XAGE3Q8WTP9 111 aa16.74■□□□□ 0.27
SCUBE2-201ENST00000309263 CHMP4CQ96CF2 233 aa16.74■□□□□ 0.27
SCUBE2-201ENST00000309263 SNRKQ9NRH2 765 aa16.74■□□□□ 0.27
SCUBE2-201ENST00000309263 PHF8Q9UPP1 1060 aa16.74■□□□□ 0.27
SCUBE2-201ENST00000309263 MORC2Q9Y6X9 1032 aaPredicted RBP16.74■□□□□ 0.27
SCUBE2-201ENST00000309263 USP31Q70CQ4 1352 aa16.74■□□□□ 0.27
SCUBE2-201ENST00000309263 GIGYF1O75420 1035 aaPredicted RBP16.74■□□□□ 0.27
SCUBE2-201ENST00000309263 PDIA4P13667 645 aaKnown RBP16.74■□□□□ 0.27
SCUBE2-201ENST00000309263 MRPS27Q92552 414 aaKnown RBP16.74■□□□□ 0.27
SCUBE2-201ENST00000309263 PCDHA7Q9UN72 937 aa16.74■□□□□ 0.27
SCUBE2-201ENST00000309263 WASHC4Q2M389 1173 aa16.73■□□□□ 0.27
SCUBE2-201ENST00000309263 MCMDC2Q4G0Z9 681 aa16.73■□□□□ 0.27
SCUBE2-201ENST00000309263 TTLL5Q6EMB2 1281 aa16.73■□□□□ 0.27
SCUBE2-201ENST00000309263 NSUN7Q8NE18 718 aaKnown RBP16.73■□□□□ 0.27
SCUBE2-201ENST00000309263 TIMM10P62072 90 aa16.73■□□□□ 0.27
SCUBE2-201ENST00000309263 FKBP4Q02790 459 aaKnown RBP eCLIP16.73■□□□□ 0.27
SCUBE2-201ENST00000309263 CCDC34Q96HJ3 373 aa16.73■□□□□ 0.27
SCUBE2-201ENST00000309263 U3KPZ7 1027 aaPredicted RBP16.73■□□□□ 0.27
SCUBE2-201ENST00000309263 CAVIN2O95810 425 aa16.73■□□□□ 0.27
SCUBE2-201ENST00000309263 SLC3A2P08195 630 aaKnown RBP16.73■□□□□ 0.27
SCUBE2-201ENST00000309263 STOX1Q6ZVD7 989 aa16.73■□□□□ 0.27
SCUBE2-201ENST00000309263 PEAK1Q9H792 1746 aa16.73■□□□□ 0.27
SCUBE2-201ENST00000309263 SEC31AO94979 1220 aaKnown RBP16.72■□□□□ 0.27
SCUBE2-201ENST00000309263 USP42Q9H9J4 1324 aaKnown RBP16.72■□□□□ 0.27
SCUBE2-201ENST00000309263 PPP1R13BQ96KQ4 1090 aa16.72■□□□□ 0.27
SCUBE2-201ENST00000309263 UTP14AQ9BVJ6 771 aaKnown RBP16.72■□□□□ 0.27
SCUBE2-201ENST00000309263 ATP1A3P13637 1013 aa16.72■□□□□ 0.27
SCUBE2-201ENST00000309263 RBM43Q6ZSC3 357 aaKnown RBP16.72■□□□□ 0.27
SCUBE2-201ENST00000309263 CLIC4Q9Y696 253 aa16.72■□□□□ 0.27
SCUBE2-201ENST00000309263 NWD1Q149M9 1564 aa16.72■□□□□ 0.27
SCUBE2-201ENST00000309263 GSDMDP57764 484 aa16.71■□□□□ 0.27
SCUBE2-201ENST00000309263 E4F1Q66K89 784 aaPredicted RBP16.71■□□□□ 0.27
SCUBE2-201ENST00000309263 TMCO3Q6UWJ1 677 aa16.71■□□□□ 0.27
SCUBE2-201ENST00000309263 NYAP1Q6ZVC0 841 aa16.71■□□□□ 0.27
SCUBE2-201ENST00000309263 DHX32Q7L7V1 743 aaKnown RBP16.71■□□□□ 0.27
SCUBE2-201ENST00000309263 CADPS2Q86UW7 1296 aa16.71■□□□□ 0.27
SCUBE2-201ENST00000309263 KCNB2Q92953 911 aa16.71■□□□□ 0.27
SCUBE2-201ENST00000309263 NRKQ7Z2Y5 1582 aa16.71■□□□□ 0.27
SCUBE2-201ENST00000309263 BMS1Q14692 1282 aaKnown RBP16.71■□□□□ 0.27
SCUBE2-201ENST00000309263 TNNI3KQ59H18 835 aa16.71■□□□□ 0.27
SCUBE2-201ENST00000309263 C8orf76Q96K31 380 aa16.71■□□□□ 0.27
SCUBE2-201ENST00000309263 TIGD1Q96MW7 591 aa16.71■□□□□ 0.27
SCUBE2-201ENST00000309263 ORAI2Q96SN7 254 aa16.71■□□□□ 0.27
SCUBE2-201ENST00000309263 FPGT-TNNI3KV9GXZ4 949 aa16.71■□□□□ 0.27
SCUBE2-201ENST00000309263 RXRAP19793 462 aa16.71■□□□□ 0.27
SCUBE2-201ENST00000309263 CLCN6P51797 869 aa16.71■□□□□ 0.27
SCUBE2-201ENST00000309263 MTX1Q13505 466 aa16.71■□□□□ 0.27
SCUBE2-201ENST00000309263 TEX35Q5T0J7 233 aa16.71■□□□□ 0.27
SCUBE2-201ENST00000309263 IGKV5-2P06315 115 aa16.7■□□□□ 0.26
SCUBE2-201ENST00000309263 SYCP1Q15431 976 aa16.7■□□□□ 0.26
SCUBE2-201ENST00000309263 NEK11Q8NG66 645 aa16.7■□□□□ 0.26
SCUBE2-201ENST00000309263 RCOR1Q9UKL0 485 aa16.7■□□□□ 0.26
SCUBE2-201ENST00000309263 ANKARQ7Z5J8 1434 aa16.7■□□□□ 0.26
SCUBE2-201ENST00000309263 A0A087WZG4 1122 aa16.7■□□□□ 0.26
SCUBE2-201ENST00000309263 RNMTO43148 476 aaKnown RBP16.7■□□□□ 0.26
SCUBE2-201ENST00000309263 CARD6Q9BX69 1037 aa16.7■□□□□ 0.26
SCUBE2-201ENST00000309263 ARMCX5Q6P1M9 558 aa16.7■□□□□ 0.26
SCUBE2-201ENST00000309263 ZCCHC17Q9NP64 241 aaKnown RBP16.7■□□□□ 0.26
SCUBE2-201ENST00000309263 ATP2B1P20020 1258 aa16.69■□□□□ 0.26
SCUBE2-201ENST00000309263 CDC25BP30305 580 aa16.69■□□□□ 0.26
SCUBE2-201ENST00000309263 AKAP4Q5JQC9 854 aa16.69■□□□□ 0.26
SCUBE2-201ENST00000309263 DDX17Q92841 729 aaKnown RBP16.69■□□□□ 0.26
SCUBE2-201ENST00000309263 ARGLU1Q9NWB6 273 aaPredicted RBP16.69■□□□□ 0.26
SCUBE2-201ENST00000309263 ZNF446Q9NWS9 450 aa16.69■□□□□ 0.26
SCUBE2-201ENST00000309263 TAF3Q5VWG9 929 aa16.69■□□□□ 0.26
SCUBE2-201ENST00000309263 SARM1Q6SZW1 724 aa16.69■□□□□ 0.26
SCUBE2-201ENST00000309263 PLCD3Q8N3E9 789 aa16.69■□□□□ 0.26
SCUBE2-201ENST00000309263 CTDNEP1O95476 244 aa16.69■□□□□ 0.26
SCUBE2-201ENST00000309263 KIAA1468Q9P260 1216 aa16.68■□□□□ 0.26
SCUBE2-201ENST00000309263 ORC3Q9UBD5 711 aaPredicted RBP16.68■□□□□ 0.26
SCUBE2-201ENST00000309263 ITSN1Q15811 1721 aa16.68■□□□□ 0.26
SCUBE2-201ENST00000309263 NALCNQ8IZF0 1738 aa16.68■□□□□ 0.26
SCUBE2-201ENST00000309263 UBASH3AP57075 661 aa16.68■□□□□ 0.26
SCUBE2-201ENST00000309263 CREBRFQ8IUR6 639 aa16.68■□□□□ 0.26
SCUBE2-201ENST00000309263 BABAM1Q9NWV8 329 aa16.68■□□□□ 0.26
SCUBE2-201ENST00000309263 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.68■□□□□ 0.26
SCUBE2-201ENST00000309263 ADD1P35611 737 aaKnown RBP16.68■□□□□ 0.26
SCUBE2-201ENST00000309263 LMBR1LQ6UX01 489 aa16.68■□□□□ 0.26
SCUBE2-201ENST00000309263 NLRP2Q9NX02 1062 aa16.68■□□□□ 0.26
SCUBE2-201ENST00000309263 COL15A1P39059 1388 aa16.68■□□□□ 0.26
SCUBE2-201ENST00000309263 GOLGA8BA8MQT2 603 aa16.67■□□□□ 0.26
SCUBE2-201ENST00000309263 SPTLC2O15270 562 aa16.67■□□□□ 0.26
SCUBE2-201ENST00000309263 NBPF11Q86T75 865 aa16.67■□□□□ 0.26
SCUBE2-201ENST00000309263 PFKFB2O60825 505 aa16.67■□□□□ 0.26
SCUBE2-201ENST00000309263 GYS2P54840 703 aa16.67■□□□□ 0.26
SCUBE2-201ENST00000309263 GCKRQ14397 625 aa16.67■□□□□ 0.26
SCUBE2-201ENST00000309263 SPECC1Q5M775 1068 aa16.67■□□□□ 0.26
SCUBE2-201ENST00000309263 NEURL1BA8MQ27 555 aa16.67■□□□□ 0.26
SCUBE2-201ENST00000309263 ZNF202O95125 648 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms