RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 USP44Q9H0E7 712 aa25.08■■□□□ 1.61
PDZRN3-202ENST00000308537 TAF5LO75529 589 aa25.07■■□□□ 1.6
PDZRN3-202ENST00000308537 DACT2Q5SW24 774 aa25.07■■□□□ 1.6
PDZRN3-202ENST00000308537 SMC4Q9NTJ3 1288 aa25.07■■□□□ 1.6
PDZRN3-202ENST00000308537 THSD7BQ9C0I4 1608 aa25.07■■□□□ 1.6
PDZRN3-202ENST00000308537 USP17L3A6NCW0 530 aa25.06■■□□□ 1.6
PDZRN3-202ENST00000308537 USP17L4A6NCW7 530 aa25.06■■□□□ 1.6
PDZRN3-202ENST00000308537 VEGFBP49765 207 aa25.06■■□□□ 1.6
PDZRN3-202ENST00000308537 DLK2Q6UY11 383 aa25.06■■□□□ 1.6
PDZRN3-202ENST00000308537 C15orf52Q6ZUT6 534 aaKnown RBP25.06■■□□□ 1.6
PDZRN3-202ENST00000308537 USP17L1Q7RTZ2 530 aa25.06■■□□□ 1.6
PDZRN3-202ENST00000308537 HELBQ8NG08 1087 aaPredicted RBP25.06■■□□□ 1.6
PDZRN3-202ENST00000308537 COA1Q9GZY4 146 aa25.06■■□□□ 1.6
PDZRN3-202ENST00000308537 BICC1Q9H694 974 aaKnown RBP25.06■■□□□ 1.6
PDZRN3-202ENST00000308537 CHMP3Q9Y3E7 222 aa25.06■■□□□ 1.6
PDZRN3-202ENST00000308537 MXD3Q9BW11 206 aa25.05■■□□□ 1.6
PDZRN3-202ENST00000308537 ASTN2O75129 1339 aaPredicted RBP25.05■■□□□ 1.6
PDZRN3-202ENST00000308537 G3V3G9 751 aa25.04■■□□□ 1.6
PDZRN3-202ENST00000308537 CCDC57Q2TAC2 916 aa25.04■■□□□ 1.6
PDZRN3-202ENST00000308537 DCAF8Q5TAQ9 597 aa25.04■■□□□ 1.6
PDZRN3-202ENST00000308537 PUS3Q9BZE2 481 aaKnown RBP25.04■■□□□ 1.6
PDZRN3-202ENST00000308537 RARSP54136 660 aaKnown RBP25.03■■□□□ 1.6
PDZRN3-202ENST00000308537 KIF4BQ2VIQ3 1234 aa25.03■■□□□ 1.6
PDZRN3-202ENST00000308537 CDC37L1Q7L3B6 337 aa25.03■■□□□ 1.6
PDZRN3-202ENST00000308537 HSPA1AP0DMV8 641 aaKnown RBP25.02■■□□□ 1.6
PDZRN3-202ENST00000308537 HSPA1BP0DMV9 641 aaKnown RBP25.02■■□□□ 1.6
PDZRN3-202ENST00000308537 STRIP1Q5VSL9 837 aa25.02■■□□□ 1.6
PDZRN3-202ENST00000308537 LDHAL6AQ6ZMR3 332 aa25.02■■□□□ 1.6
PDZRN3-202ENST00000308537 TLL2Q9Y6L7 1015 aa25.02■■□□□ 1.6
PDZRN3-202ENST00000308537 RBM26Q5T8P6 1007 aaKnown RBP25.01■■□□□ 1.59
PDZRN3-202ENST00000308537 USP48Q86UV5 1035 aa25.01■■□□□ 1.59
PDZRN3-202ENST00000308537 CD209Q9NNX6 404 aa25.01■■□□□ 1.59
PDZRN3-202ENST00000308537 NOB1Q9ULX3 412 aaKnown RBP25.01■■□□□ 1.59
PDZRN3-202ENST00000308537 RIPOR2Q9Y4F9 1068 aa25.01■■□□□ 1.59
PDZRN3-202ENST00000308537 USP17L8P0C7I0 530 aa25■■□□□ 1.59
PDZRN3-202ENST00000308537 DEFB115Q30KQ5 88 aa25■■□□□ 1.59
PDZRN3-202ENST00000308537 CELF2O95319 508 aaKnown RBP24.99■■□□□ 1.59
PDZRN3-202ENST00000308537 SAPCD2Q86UD0 394 aa24.99■■□□□ 1.59
PDZRN3-202ENST00000308537 ADM5C9JUS6 153 aa24.98■■□□□ 1.59
PDZRN3-202ENST00000308537 MYOZ2Q9NPC6 264 aa24.98■■□□□ 1.59
PDZRN3-202ENST00000308537 CNNM1Q9NRU3 951 aa24.98■■□□□ 1.59
PDZRN3-202ENST00000308537 GGA3Q9NZ52 723 aa24.98■■□□□ 1.59
PDZRN3-202ENST00000308537 ABT1Q9ULW3 272 aaKnown RBP24.98■■□□□ 1.59
PDZRN3-202ENST00000308537 IL1R1P14778 569 aa24.97■■□□□ 1.59
PDZRN3-202ENST00000308537 KCNJ4P48050 445 aa24.97■■□□□ 1.59
PDZRN3-202ENST00000308537 RFX5P48382 616 aaPredicted RBP24.97■■□□□ 1.59
PDZRN3-202ENST00000308537 KRT26Q7Z3Y9 468 aa24.97■■□□□ 1.59
PDZRN3-202ENST00000308537 CERS5Q8N5B7 392 aa24.97■■□□□ 1.59
PDZRN3-202ENST00000308537 VGLL2Q8N8G2 317 aa24.97■■□□□ 1.59
PDZRN3-202ENST00000308537 MYO3BQ8WXR4 1341 aa24.96■■□□□ 1.59
PDZRN3-202ENST00000308537 WDR33Q9C0J8 1336 aaKnown RBP24.96■■□□□ 1.59
PDZRN3-202ENST00000308537 SCARF1Q14162 830 aa24.96■■□□□ 1.59
PDZRN3-202ENST00000308537 LRRC24Q50LG9 513 aa24.96■■□□□ 1.59
PDZRN3-202ENST00000308537 TAF7LQ5H9L4 462 aa24.96■■□□□ 1.59
PDZRN3-202ENST00000308537 TTLL5Q6EMB2 1281 aa24.96■■□□□ 1.59
PDZRN3-202ENST00000308537 GTF2IP78347 998 aa24.95■■□□□ 1.58
PDZRN3-202ENST00000308537 KLHDC4Q8TBB5 520 aa24.95■■□□□ 1.58
PDZRN3-202ENST00000308537 ZBED3Q96IU2 234 aaPredicted RBP24.95■■□□□ 1.58
PDZRN3-202ENST00000308537 UBE4AQ14139 1066 aa24.94■■□□□ 1.58
PDZRN3-202ENST00000308537 NBPF9Q3BBW0 867 aa24.94■■□□□ 1.58
PDZRN3-202ENST00000308537 ANGEL2Q5VTE6 544 aaKnown RBP24.94■■□□□ 1.58
PDZRN3-202ENST00000308537 PLIN1O60240 522 aa24.93■■□□□ 1.58
PDZRN3-202ENST00000308537 COL13A1Q5TAT6 717 aaPredicted RBP24.93■■□□□ 1.58
PDZRN3-202ENST00000308537 CYP4F22Q6NT55 531 aa24.93■■□□□ 1.58
PDZRN3-202ENST00000308537 ARHGAP45Q92619 1136 aa24.93■■□□□ 1.58
PDZRN3-202ENST00000308537 DCPSQ96C86 337 aaKnown RBP24.93■■□□□ 1.58
PDZRN3-202ENST00000308537 HHIPL1Q96JK4 782 aa24.93■■□□□ 1.58
PDZRN3-202ENST00000308537 CAPNS2Q96L46 248 aa24.93■■□□□ 1.58
PDZRN3-202ENST00000308537 API5Q9BZZ5 524 aaKnown RBP24.93■■□□□ 1.58
PDZRN3-202ENST00000308537 WBP1LQ9NX94 342 aa24.93■■□□□ 1.58
PDZRN3-202ENST00000308537 PITPNM2Q9BZ72 1349 aa24.92■■□□□ 1.58
PDZRN3-202ENST00000308537 WNT10BO00744 389 aa24.92■■□□□ 1.58
PDZRN3-202ENST00000308537 FAM84BQ96KN1 310 aaPredicted RBP24.92■■□□□ 1.58
PDZRN3-202ENST00000308537 TNNQ9UQP3 1299 aa24.92■■□□□ 1.58
PDZRN3-202ENST00000308537 ARAP2Q8WZ64 1704 aa24.92■■□□□ 1.58
PDZRN3-202ENST00000308537 MROH5Q6ZUA9 1318 aa24.91■■□□□ 1.58
PDZRN3-202ENST00000308537 PTPN12Q05209 780 aaKnown RBP24.91■■□□□ 1.58
PDZRN3-202ENST00000308537 KIAA0825Q8IV33 1275 aa24.91■■□□□ 1.58
PDZRN3-202ENST00000308537 FBXW7Q969H0 707 aa24.91■■□□□ 1.58
PDZRN3-202ENST00000308537 ZNF408Q9H9D4 720 aa24.91■■□□□ 1.58
PDZRN3-202ENST00000308537 KIF16BQ96L93 1317 aa24.9■■□□□ 1.58
PDZRN3-202ENST00000308537 FOXN1O15353 648 aa24.9■■□□□ 1.58
PDZRN3-202ENST00000308537 BCAR3O75815 825 aa24.9■■□□□ 1.58
PDZRN3-202ENST00000308537 HNRNPUQ00839 825 aaKnown RBP eCLIP24.9■■□□□ 1.58
PDZRN3-202ENST00000308537 INTS3Q68E01 1043 aaKnown RBP24.9■■□□□ 1.58
PDZRN3-202ENST00000308537 ZNF804AQ7Z570 1209 aa24.9■■□□□ 1.58
PDZRN3-202ENST00000308537 TDRD7Q8NHU6 1098 aaKnown RBP24.9■■□□□ 1.58
PDZRN3-202ENST00000308537 ECM29Q5VYK3 1845 aa24.9■■□□□ 1.58
PDZRN3-202ENST00000308537 FAM205AQ6ZU69 1335 aa24.89■■□□□ 1.58
PDZRN3-202ENST00000308537 GYG1P46976 350 aa24.89■■□□□ 1.58
PDZRN3-202ENST00000308537 CDCA5Q96FF9 252 aa24.89■■□□□ 1.58
PDZRN3-202ENST00000308537 MEIS3Q99687 375 aa24.89■■□□□ 1.58
PDZRN3-202ENST00000308537 SCAF8Q9UPN6 1271 aaKnown RBP24.89■■□□□ 1.58
PDZRN3-202ENST00000308537 TRIM27P14373 513 aa24.88■■□□□ 1.57
PDZRN3-202ENST00000308537 MMP14P50281 582 aa24.88■■□□□ 1.57
PDZRN3-202ENST00000308537 FKBP1AP62942 108 aaKnown RBP24.88■■□□□ 1.57
PDZRN3-202ENST00000308537 FBXO33Q7Z6M2 555 aa24.88■■□□□ 1.57
PDZRN3-202ENST00000308537 SULF1Q8IWU6 871 aa24.88■■□□□ 1.57
PDZRN3-202ENST00000308537 SASH1O94885 1247 aa24.87■■□□□ 1.57
PDZRN3-202ENST00000308537 PDE8BO95263 885 aa24.87■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms