RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 PHACTR3Q96KR7 559 aa15.88■□□□□ 0.13
PRKCB-201ENST00000303531 ASIC1P78348 528 aa15.88■□□□□ 0.13
PRKCB-201ENST00000303531 TRIM75PA6NK02 468 aa15.88■□□□□ 0.13
PRKCB-201ENST00000303531 LRRC59Q96AG4 307 aaKnown RBP15.88■□□□□ 0.13
PRKCB-201ENST00000303531 FLT4P35916 1363 aa15.88■□□□□ 0.13
PRKCB-201ENST00000303531 USP26Q9BXU7 913 aa15.88■□□□□ 0.13
PRKCB-201ENST00000303531 KIAA0753Q2KHM9 967 aa15.87■□□□□ 0.13
PRKCB-201ENST00000303531 PTPDC1A2A3K4 754 aa15.87■□□□□ 0.13
PRKCB-201ENST00000303531 CCDC174Q6PII3 467 aa15.87■□□□□ 0.13
PRKCB-201ENST00000303531 SOS1Q07889 1333 aaPredicted RBP15.87■□□□□ 0.13
PRKCB-201ENST00000303531 CCDC172P0C7W6 258 aa15.87■□□□□ 0.13
PRKCB-201ENST00000303531 GNAQP50148 359 aa15.87■□□□□ 0.13
PRKCB-201ENST00000303531 INTS4Q96HW7 963 aaKnown RBP15.87■□□□□ 0.13
PRKCB-201ENST00000303531 FSD2A1L4K1 749 aa15.87■□□□□ 0.13
PRKCB-201ENST00000303531 NAPAP54920 295 aa15.87■□□□□ 0.13
PRKCB-201ENST00000303531 TFCP2Q12800 502 aa15.87■□□□□ 0.13
PRKCB-201ENST00000303531 TBC1D5Q92609 795 aa15.87■□□□□ 0.13
PRKCB-201ENST00000303531 CARD14Q9BXL6 1004 aa15.87■□□□□ 0.13
PRKCB-201ENST00000303531 TTLL12Q14166 644 aaPredicted RBP15.86■□□□□ 0.13
PRKCB-201ENST00000303531 ZFP91Q96JP5 570 aaPredicted RBP15.86■□□□□ 0.13
PRKCB-201ENST00000303531 PLCH2O75038 1416 aa15.86■□□□□ 0.13
PRKCB-201ENST00000303531 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.86■□□□□ 0.13
PRKCB-201ENST00000303531 V9GYY5 206 aaPredicted RBP15.86■□□□□ 0.13
PRKCB-201ENST00000303531 NPHP3Q7Z494 1330 aa15.86■□□□□ 0.13
PRKCB-201ENST00000303531 MSH6P52701 1360 aa15.86■□□□□ 0.13
PRKCB-201ENST00000303531 ST5P78524 1137 aa15.86■□□□□ 0.13
PRKCB-201ENST00000303531 MCM6Q14566 821 aa15.86■□□□□ 0.13
PRKCB-201ENST00000303531 BICD1Q96G01 975 aa15.86■□□□□ 0.13
PRKCB-201ENST00000303531 ATP6V1AP38606 617 aa15.86■□□□□ 0.13
PRKCB-201ENST00000303531 DNAJC5BQ9UF47 199 aa15.86■□□□□ 0.13
PRKCB-201ENST00000303531 MAP3K5Q99683 1374 aa15.86■□□□□ 0.13
PRKCB-201ENST00000303531 MAGEB6P1A0A0J9YX57 407 aa15.86■□□□□ 0.13
PRKCB-201ENST00000303531 GIGYF2Q6Y7W6 1299 aaKnown RBP15.86■□□□□ 0.13
PRKCB-201ENST00000303531 SLU7O95391 586 aaKnown RBP15.86■□□□□ 0.13
PRKCB-201ENST00000303531 SPECC1LQ69YQ0 1117 aa15.86■□□□□ 0.13
PRKCB-201ENST00000303531 NFATC2IPQ8NCF5 419 aa15.86■□□□□ 0.13
PRKCB-201ENST00000303531 ZNF622Q969S3 477 aaKnown RBP eCLIP15.86■□□□□ 0.131e-8■□□□□ 8.3
PRKCB-201ENST00000303531 DHX32Q7L7V1 743 aaKnown RBP15.85■□□□□ 0.13
PRKCB-201ENST00000303531 RIMS2Q9UQ26 1411 aa15.85■□□□□ 0.13
PRKCB-201ENST00000303531 BICRAQ9NZM4 1560 aa15.85■□□□□ 0.13
PRKCB-201ENST00000303531 UHRF1BP1LA0JNW5 1464 aa15.85■□□□□ 0.13
PRKCB-201ENST00000303531 ATP10BO94823 1461 aa15.85■□□□□ 0.13
PRKCB-201ENST00000303531 A2MP01023 1474 aa15.85■□□□□ 0.13
PRKCB-201ENST00000303531 CTAGE9A4FU28 777 aa15.85■□□□□ 0.13
PRKCB-201ENST00000303531 NPATQ14207 1427 aa15.85■□□□□ 0.13
PRKCB-201ENST00000303531 SETDB2Q96T68 719 aa15.85■□□□□ 0.13
PRKCB-201ENST00000303531 NIP7Q9Y221 180 aaKnown RBP eCLIP15.84■□□□□ 0.13
PRKCB-201ENST00000303531 ABCC1P33527 1531 aa15.84■□□□□ 0.13
PRKCB-201ENST00000303531 RTL9Q8NET4 1388 aa15.84■□□□□ 0.13
PRKCB-201ENST00000303531 ACSBG1Q96GR2 724 aa15.84■□□□□ 0.13
PRKCB-201ENST00000303531 F8W031 263 aaPredicted RBP15.84■□□□□ 0.13
PRKCB-201ENST00000303531 BBXQ8WY36 941 aaPredicted RBP15.84■□□□□ 0.13
PRKCB-201ENST00000303531 ZFYVE9O95405 1425 aa15.84■□□□□ 0.13
PRKCB-201ENST00000303531 TACC1O75410 805 aa15.84■□□□□ 0.13
PRKCB-201ENST00000303531 KRT2P35908 639 aa15.84■□□□□ 0.13
PRKCB-201ENST00000303531 TICAM2Q86XR7 235 aa15.84■□□□□ 0.13
PRKCB-201ENST00000303531 GNAT2P19087 354 aa15.84■□□□□ 0.13
PRKCB-201ENST00000303531 NF2P35240 595 aa15.84■□□□□ 0.13
PRKCB-201ENST00000303531 STX17P56962 302 aa15.84■□□□□ 0.13
PRKCB-201ENST00000303531 SRRTQ9BXP5 876 aaKnown RBP15.84■□□□□ 0.13
PRKCB-201ENST00000303531 BICC1Q9H694 974 aaKnown RBP15.84■□□□□ 0.13
PRKCB-201ENST00000303531 IFNKQ9P0W0 207 aa15.84■□□□□ 0.13
PRKCB-201ENST00000303531 RAD50Q92878 1312 aa15.84■□□□□ 0.13
PRKCB-201ENST00000303531 A0A1W2PP64 1363 aa15.84■□□□□ 0.13
PRKCB-201ENST00000303531 STAMBPO95630 424 aa15.84■□□□□ 0.13
PRKCB-201ENST00000303531 PICALMQ13492 652 aa15.84■□□□□ 0.13
PRKCB-201ENST00000303531 MAGEB6Q8N7X4 407 aa15.84■□□□□ 0.13
PRKCB-201ENST00000303531 CALM1P0DP23 149 aa15.83■□□□□ 0.13
PRKCB-201ENST00000303531 CALM2P0DP24 149 aa15.83■□□□□ 0.13
PRKCB-201ENST00000303531 CALM3P0DP25 149 aa15.83■□□□□ 0.13
PRKCB-201ENST00000303531 NLRP3Q96P20 1036 aa15.83■□□□□ 0.13
PRKCB-201ENST00000303531 UTP14AQ9BVJ6 771 aaKnown RBP15.83■□□□□ 0.13
PRKCB-201ENST00000303531 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.83■□□□□ 0.135e-7■□□□□ 8.9
PRKCB-201ENST00000303531 MIGA1Q8NAN2 632 aa15.83■□□□□ 0.13
PRKCB-201ENST00000303531 CCDC97Q96F63 343 aaPredicted RBP15.83■□□□□ 0.13
PRKCB-201ENST00000303531 RXRAP19793 462 aa15.83■□□□□ 0.12
PRKCB-201ENST00000303531 KAT6BQ8WYB5 2073 aa15.83■□□□□ 0.12
PRKCB-201ENST00000303531 TUBB4AP04350 444 aa15.83■□□□□ 0.12
PRKCB-201ENST00000303531 HS1BP3Q53T59 392 aa15.83■□□□□ 0.12
PRKCB-201ENST00000303531 BRAPQ7Z569 592 aa15.83■□□□□ 0.12
PRKCB-201ENST00000303531 ZBTB7BO15156 539 aaPredicted RBP15.83■□□□□ 0.12
PRKCB-201ENST00000303531 CPA1P15085 419 aa15.83■□□□□ 0.12
PRKCB-201ENST00000303531 SELENOOQ9BVL4 669 aa15.83■□□□□ 0.12
PRKCB-201ENST00000303531 GOLGA1Q92805 767 aa15.83■□□□□ 0.12
PRKCB-201ENST00000303531 EYA1Q99502 592 aa15.83■□□□□ 0.12
PRKCB-201ENST00000303531 CCDC155Q8N6L0 562 aa15.82■□□□□ 0.12
PRKCB-201ENST00000303531 PLVAPQ9BX97 442 aa15.82■□□□□ 0.12
PRKCB-201ENST00000303531 HOMER2Q9NSB8 354 aa15.82■□□□□ 0.12
PRKCB-201ENST00000303531 HELBQ8NG08 1087 aaPredicted RBP15.82■□□□□ 0.12
PRKCB-201ENST00000303531 PUS7Q96PZ0 661 aaKnown RBP15.82■□□□□ 0.12
PRKCB-201ENST00000303531 C6orf50Q9HD87 102 aa15.82■□□□□ 0.12
PRKCB-201ENST00000303531 KRT13P13646 458 aa15.82■□□□□ 0.12
PRKCB-201ENST00000303531 CALML3P27482 149 aa15.82■□□□□ 0.12
PRKCB-201ENST00000303531 KRT83P78385 493 aa15.82■□□□□ 0.12
PRKCB-201ENST00000303531 ARID5AQ03989 594 aa15.82■□□□□ 0.12
PRKCB-201ENST00000303531 NUP153P49790 1475 aaKnown RBP15.82■□□□□ 0.12
PRKCB-201ENST00000303531 KARSQ15046 597 aaKnown RBP15.82■□□□□ 0.12
PRKCB-201ENST00000303531 ACTN2P35609 894 aa15.82■□□□□ 0.12
PRKCB-201ENST00000303531 UBXN1Q04323 297 aa15.81■□□□□ 0.12
PRKCB-201ENST00000303531 KRT86O43790 486 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms