RNA–Protein interactions for RNA: ENST00000302731.4

CLP1-201, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 2 BASIC

Gene CLP1, Length 1,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-201ENST00000302731 SRP68Q9UHB9 627 aaKnown RBP12.7□□□□□ -0.38
CLP1-201ENST00000302731 CASTP20810 708 aaKnown RBP12.69□□□□□ -0.38
CLP1-201ENST00000302731 ZAP70P43403 619 aa12.69□□□□□ -0.38
CLP1-201ENST00000302731 SCARF1Q14162 830 aa12.69□□□□□ -0.38
CLP1-201ENST00000302731 NBPF5PQ86XG9 351 aaPredicted RBP12.69□□□□□ -0.38
CLP1-201ENST00000302731 ANKRD18AQ8IVF6 992 aa12.69□□□□□ -0.38
CLP1-201ENST00000302731 JAKMIP1Q96N16 626 aaKnown RBP12.69□□□□□ -0.38
CLP1-201ENST00000302731 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.69□□□□□ -0.38
CLP1-201ENST00000302731 LRRC4BQ9NT99 713 aa12.69□□□□□ -0.38
CLP1-201ENST00000302731 CARMIL3Q8ND23 1372 aa12.68□□□□□ -0.38
CLP1-201ENST00000302731 MCM4P33991 863 aa12.68□□□□□ -0.38
CLP1-201ENST00000302731 ADCK5Q3MIX3 580 aa12.68□□□□□ -0.38
CLP1-201ENST00000302731 BICDL1Q6ZP65 573 aa12.68□□□□□ -0.38
CLP1-201ENST00000302731 APPBP2Q92624 585 aa12.68□□□□□ -0.38
CLP1-201ENST00000302731 ZSCAN31Q96LW9 406 aaPredicted RBP12.68□□□□□ -0.38
CLP1-201ENST00000302731 GBP4Q96PP9 640 aa12.68□□□□□ -0.38
CLP1-201ENST00000302731 SEC62Q99442 399 aaKnown RBP12.68□□□□□ -0.38
CLP1-201ENST00000302731 LIMCH1Q9UPQ0 1083 aa12.68□□□□□ -0.38
CLP1-201ENST00000302731 MAST3O60307 1309 aa12.68□□□□□ -0.38
CLP1-201ENST00000302731 DDX11L8A8MPP1 907 aa12.67□□□□□ -0.38
CLP1-201ENST00000302731 CYP2E1P05181 493 aaPredicted RBP12.67□□□□□ -0.38
CLP1-201ENST00000302731 PHKA1P46020 1223 aa12.67□□□□□ -0.38
CLP1-201ENST00000302731 AK2P54819 239 aa12.67□□□□□ -0.38
CLP1-201ENST00000302731 CHRNDQ07001 517 aa12.67□□□□□ -0.38
CLP1-201ENST00000302731 UBE4AQ14139 1066 aa12.67□□□□□ -0.38
CLP1-201ENST00000302731 ANKRD1Q15327 319 aa12.67□□□□□ -0.38
CLP1-201ENST00000302731 UBE3CQ15386 1083 aa12.67□□□□□ -0.38
CLP1-201ENST00000302731 UBR3Q6ZT12 1888 aa12.67□□□□□ -0.38
CLP1-201ENST00000302731 AMIGO3Q86WK7 504 aa12.67□□□□□ -0.38
CLP1-201ENST00000302731 TNPO1Q92973 898 aaKnown RBP12.67□□□□□ -0.38
CLP1-201ENST00000302731 FOXD4L1Q9NU39 408 aa12.67□□□□□ -0.38
CLP1-201ENST00000302731 PDRG1Q9NUG6 133 aa12.67□□□□□ -0.38
CLP1-201ENST00000302731 CASZ1Q86V15 1759 aa12.67□□□□□ -0.38
CLP1-201ENST00000302731 MYH7P12883 1935 aa12.66□□□□□ -0.38
CLP1-201ENST00000302731 PTMSP20962 102 aa12.66□□□□□ -0.38
CLP1-201ENST00000302731 BLOC1S2Q6QNY1 142 aa12.66□□□□□ -0.38
CLP1-201ENST00000302731 CCDC129Q6ZRS4 1044 aa12.66□□□□□ -0.38
CLP1-201ENST00000302731 ZGPATQ8N5A5 531 aaKnown RBP12.66□□□□□ -0.38
CLP1-201ENST00000302731 HELBQ8NG08 1087 aaPredicted RBP12.66□□□□□ -0.38
CLP1-201ENST00000302731 SH2B1Q9NRF2 756 aaPredicted RBP12.66□□□□□ -0.38
CLP1-201ENST00000302731 ZBTB22O15209 634 aa12.66□□□□□ -0.38
CLP1-201ENST00000302731 CHGBP05060 677 aa12.66□□□□□ -0.38
CLP1-201ENST00000302731 HSPD1P10809 573 aaKnown RBP12.66□□□□□ -0.38
CLP1-201ENST00000302731 ADD2P35612 726 aa12.66□□□□□ -0.38
CLP1-201ENST00000302731 C3orf67Q6ZVT6 689 aa12.66□□□□□ -0.38
CLP1-201ENST00000302731 SMIM5Q71RC9 77 aa12.66□□□□□ -0.38
CLP1-201ENST00000302731 OSBP2Q969R2 916 aa12.66□□□□□ -0.38
CLP1-201ENST00000302731 A0A1B0GUL6 1792 aa12.65□□□□□ -0.38
CLP1-201ENST00000302731 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.65□□□□□ -0.38
CLP1-201ENST00000302731 PLSCR1O15162 318 aa12.65□□□□□ -0.38
CLP1-201ENST00000302731 TRIM37O94972 964 aa12.65□□□□□ -0.38
CLP1-201ENST00000302731 CYP21A2P08686 494 aa12.65□□□□□ -0.38
CLP1-201ENST00000302731 HMGB1P09429 215 aaKnown RBP12.65□□□□□ -0.38
CLP1-201ENST00000302731 RPS6KB1P23443 525 aa12.65□□□□□ -0.38
CLP1-201ENST00000302731 RPS8P62241 208 aaKnown RBP12.65□□□□□ -0.38
CLP1-201ENST00000302731 SPATA5Q8NB90 893 aa12.65□□□□□ -0.38
CLP1-201ENST00000302731 CTNNA3Q9UI47 895 aa12.65□□□□□ -0.38
CLP1-201ENST00000302731 ZNF804BA4D1E1 1349 aa12.65□□□□□ -0.38
CLP1-201ENST00000302731 M0R2C6 588 aa12.64□□□□□ -0.39
CLP1-201ENST00000302731 NFIXQ14938 502 aa12.64□□□□□ -0.39
CLP1-201ENST00000302731 PI16Q6UXB8 463 aa12.64□□□□□ -0.39
CLP1-201ENST00000302731 NEK1Q96PY6 1258 aa12.64□□□□□ -0.39
CLP1-201ENST00000302731 ANKRD2Q9GZV1 360 aa12.64□□□□□ -0.39
CLP1-201ENST00000302731 MINPP1Q9UNW1 487 aa12.64□□□□□ -0.39
CLP1-201ENST00000302731 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.64□□□□□ -0.39
CLP1-201ENST00000302731 DOCK2Q92608 1830 aa12.64□□□□□ -0.39
CLP1-201ENST00000302731 PHF14O94880 888 aa12.63□□□□□ -0.39
CLP1-201ENST00000302731 RASGRF1Q13972 1273 aa12.63□□□□□ -0.39
CLP1-201ENST00000302731 WASHC4Q2M389 1173 aa12.63□□□□□ -0.39
CLP1-201ENST00000302731 CELF1Q92879 486 aaKnown RBP12.63□□□□□ -0.39
CLP1-201ENST00000302731 PIH1D3Q9NQM4 214 aaKnown RBP12.63□□□□□ -0.39
CLP1-201ENST00000302731 GNL3LQ9NVN8 582 aaKnown RBP12.63□□□□□ -0.39
CLP1-201ENST00000302731 COL4A1P02462 1669 aa12.63□□□□□ -0.39
CLP1-201ENST00000302731 PDIA4P13667 645 aaKnown RBP12.62□□□□□ -0.39
CLP1-201ENST00000302731 GYS1P13807 737 aa12.62□□□□□ -0.39
CLP1-201ENST00000302731 TM4SF1P30408 202 aa12.62□□□□□ -0.39
CLP1-201ENST00000302731 MAP3K12Q12852 859 aa12.62□□□□□ -0.39
CLP1-201ENST00000302731 TXNRD1Q16881 649 aa12.62□□□□□ -0.39
CLP1-201ENST00000302731 SLC9C2Q5TAH2 1124 aa12.62□□□□□ -0.39
CLP1-201ENST00000302731 CNBD1Q8NA66 436 aa12.62□□□□□ -0.39
CLP1-201ENST00000302731 TCRBV5S4A2TA0A5A2 114 aa12.62□□□□□ -0.39
CLP1-201ENST00000302731 SEMA3EO15041 775 aa12.62□□□□□ -0.39
CLP1-201ENST00000302731 GPAA1O43292 621 aa12.62□□□□□ -0.39
CLP1-201ENST00000302731 CPA1P15085 419 aa12.62□□□□□ -0.39
CLP1-201ENST00000302731 PDE6AP16499 860 aa12.62□□□□□ -0.39
CLP1-201ENST00000302731 SLFNL1Q499Z3 407 aa12.62□□□□□ -0.39
CLP1-201ENST00000302731 NOL8Q76FK4 1167 aaKnown RBP12.62□□□□□ -0.39
CLP1-201ENST00000302731 PUS7LQ9H0K6 701 aaKnown RBP12.62□□□□□ -0.39
CLP1-201ENST00000302731 GOLGA6L22H0YM25 854 aa12.61□□□□□ -0.39
CLP1-201ENST00000302731 IDH1O75874 414 aaKnown RBP12.61□□□□□ -0.39
CLP1-201ENST00000302731 BRD1O95696 1058 aa12.61□□□□□ -0.39
CLP1-201ENST00000302731 BCAMP50895 628 aa12.61□□□□□ -0.39
CLP1-201ENST00000302731 CAVIN4Q5BKX8 364 aa12.61□□□□□ -0.39
CLP1-201ENST00000302731 PROM2Q8N271 834 aa12.61□□□□□ -0.39
CLP1-201ENST00000302731 FBXL16Q8N461 479 aa12.61□□□□□ -0.39
CLP1-201ENST00000302731 TAF6LQ9Y6J9 622 aa12.61□□□□□ -0.39
CLP1-201ENST00000302731 ZMYM6O95789 1325 aa12.61□□□□□ -0.39
CLP1-201ENST00000302731 PDS5AQ29RF7 1337 aaKnown RBP12.61□□□□□ -0.39
CLP1-201ENST00000302731 TNRC6CQ9HCJ0 1690 aaKnown RBP12.6□□□□□ -0.39
CLP1-201ENST00000302731 ZNF532Q9HCE3 1301 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms