RNA–Protein interactions for RNA: ENST00000302206.9

TPM3-202, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-202ENST00000302206 AKT1S1Q96B36 256 aa14.44□□□□□ -0.1
TPM3-202ENST00000302206 SETDB2Q96T68 719 aa14.44□□□□□ -0.1
TPM3-202ENST00000302206 CDC5LQ99459 802 aaKnown RBP14.44□□□□□ -0.1
TPM3-202ENST00000302206 TM6SF1Q9BZW5 370 aa14.44□□□□□ -0.1
TPM3-202ENST00000302206 HELLSQ9NRZ9 838 aa14.44□□□□□ -0.1
TPM3-202ENST00000302206 SNX14Q9Y5W7 946 aa14.44□□□□□ -0.1
TPM3-202ENST00000302206 FAM177BA6PVY3 158 aa14.43□□□□□ -0.1
TPM3-202ENST00000302206 ZFYP08048 801 aaPredicted RBP14.43□□□□□ -0.1
TPM3-202ENST00000302206 SSFA2P28290 1259 aa14.43□□□□□ -0.1
TPM3-202ENST00000302206 ADORA1P30542 326 aa14.43□□□□□ -0.1
TPM3-202ENST00000302206 IGHMBP2P38935 993 aaKnown RBP14.43□□□□□ -0.1
TPM3-202ENST00000302206 NEK4P51957 841 aa14.43□□□□□ -0.1
TPM3-202ENST00000302206 PTH1RQ03431 593 aa14.43□□□□□ -0.1
TPM3-202ENST00000302206 ERFEQ4G0M1 354 aa14.43□□□□□ -0.1
TPM3-202ENST00000302206 TRAPPC3LQ5T215 181 aa14.43□□□□□ -0.1
TPM3-202ENST00000302206 EDC3Q96F86 508 aaKnown RBP14.43□□□□□ -0.1
TPM3-202ENST00000302206 MPHOSPH8Q99549 860 aa14.43□□□□□ -0.1
TPM3-202ENST00000302206 GOLIM4O00461 696 aa14.42□□□□□ -0.1
TPM3-202ENST00000302206 TAF5LO75529 589 aa14.42□□□□□ -0.1
TPM3-202ENST00000302206 UQCRFS1P1P0C7P4 283 aa14.42□□□□□ -0.1
TPM3-202ENST00000302206 YBX3P16989 372 aaKnown RBP eCLIP14.42□□□□□ -0.1
TPM3-202ENST00000302206 MCMDC2Q4G0Z9 681 aa14.42□□□□□ -0.1
TPM3-202ENST00000302206 ZMYM1Q5SVZ6 1142 aa14.42□□□□□ -0.1
TPM3-202ENST00000302206 DDX46Q7L014 1031 aaKnown RBP14.42□□□□□ -0.1
TPM3-202ENST00000302206 TFCP2L1Q9NZI6 479 aa14.42□□□□□ -0.1
TPM3-202ENST00000302206 HMG20BQ9P0W2 317 aa14.42□□□□□ -0.1
TPM3-202ENST00000302206 UBR3Q6ZT12 1888 aa14.42□□□□□ -0.1
TPM3-202ENST00000302206 PNPLA7Q6ZV29 1317 aa14.41□□□□□ -0.1
TPM3-202ENST00000302206 RNF113AO15541 343 aaKnown RBP14.41□□□□□ -0.1
TPM3-202ENST00000302206 HSP90AA1P07900 732 aaKnown RBP14.41□□□□□ -0.1
TPM3-202ENST00000302206 SLC5A1P13866 664 aa14.41□□□□□ -0.1
TPM3-202ENST00000302206 ZKSCAN1P17029 563 aaPredicted RBP14.41□□□□□ -0.1
TPM3-202ENST00000302206 ARID4AP29374 1257 aaPredicted RBP14.41□□□□□ -0.1
TPM3-202ENST00000302206 RFC4P35249 363 aa14.41□□□□□ -0.1
TPM3-202ENST00000302206 NFKBIBQ15653 356 aa14.41□□□□□ -0.1
TPM3-202ENST00000302206 TSGA10IPQ3SY00 556 aa14.41□□□□□ -0.1
TPM3-202ENST00000302206 RNF20Q5VTR2 975 aa14.41□□□□□ -0.1
TPM3-202ENST00000302206 TPTE2Q6XPS3 522 aa14.41□□□□□ -0.1
TPM3-202ENST00000302206 CWC22Q9HCG8 908 aaKnown RBP14.41□□□□□ -0.1
TPM3-202ENST00000302206 SEC31BQ9NQW1 1179 aa14.41□□□□□ -0.1
TPM3-202ENST00000302206 SRP68Q9UHB9 627 aaKnown RBP14.41□□□□□ -0.1
TPM3-202ENST00000302206 RBM8AQ9Y5S9 174 aaKnown RBP14.41□□□□□ -0.1
TPM3-202ENST00000302206 TTF1Q15361 905 aaPredicted RBP14.4□□□□□ -0.1
TPM3-202ENST00000302206 CREB3L3Q68CJ9 461 aa14.4□□□□□ -0.1
TPM3-202ENST00000302206 NBPF5PQ86XG9 351 aaPredicted RBP14.4□□□□□ -0.1
TPM3-202ENST00000302206 RASEFQ8IZ41 740 aa14.4□□□□□ -0.1
TPM3-202ENST00000302206 U3KPZ7 1027 aaPredicted RBP14.4□□□□□ -0.1
TPM3-202ENST00000302206 CARMIL3Q8ND23 1372 aa14.39□□□□□ -0.11
TPM3-202ENST00000302206 SLC27A2O14975 620 aa14.39□□□□□ -0.11
TPM3-202ENST00000302206 PSMA5P28066 241 aa14.39□□□□□ -0.11
TPM3-202ENST00000302206 GTF2E1P29083 439 aaPredicted RBP14.39□□□□□ -0.11
TPM3-202ENST00000302206 CUL4AQ13619 759 aa14.39□□□□□ -0.11
TPM3-202ENST00000302206 NBR1Q14596 966 aa14.39□□□□□ -0.11
TPM3-202ENST00000302206 ZSCAN25Q6NSZ9 544 aa14.39□□□□□ -0.11
TPM3-202ENST00000302206 PRPF40BQ6NWY9 871 aaKnown RBP14.39□□□□□ -0.11
TPM3-202ENST00000302206 ZNF589Q86UQ0 364 aaPredicted RBP14.39□□□□□ -0.11
TPM3-202ENST00000302206 ANKRD18AQ8IVF6 992 aa14.39□□□□□ -0.11
TPM3-202ENST00000302206 SPRYD3Q8NCJ5 442 aa14.39□□□□□ -0.11
TPM3-202ENST00000302206 ZSWIM6Q9HCJ5 1215 aa14.39□□□□□ -0.11
TPM3-202ENST00000302206 BSDC1Q9NW68 430 aaPredicted RBP14.39□□□□□ -0.11
TPM3-202ENST00000302206 AKAP11Q9UKA4 1901 aa14.39□□□□□ -0.11
TPM3-202ENST00000302206 A0A1B0GUL6 1792 aa14.38□□□□□ -0.11
TPM3-202ENST00000302206 KCNJ4P48050 445 aa14.38□□□□□ -0.11
TPM3-202ENST00000302206 KRT32Q14532 448 aa14.38□□□□□ -0.11
TPM3-202ENST00000302206 CCDC102BQ68D86 513 aa14.38□□□□□ -0.11
TPM3-202ENST00000302206 AMIGO3Q86WK7 504 aa14.38□□□□□ -0.11
TPM3-202ENST00000302206 ZNF526Q8TF50 670 aaPredicted RBP14.38□□□□□ -0.11
TPM3-202ENST00000302206 INTS4Q96HW7 963 aaKnown RBP14.38□□□□□ -0.11
TPM3-202ENST00000302206 TTC14Q96N46 770 aa14.38□□□□□ -0.11
TPM3-202ENST00000302206 NLRP3Q96P20 1036 aa14.38□□□□□ -0.11
TPM3-202ENST00000302206 DSCC1Q9BVC3 393 aa14.38□□□□□ -0.11
TPM3-202ENST00000302206 ALDH8A1Q9H2A2 487 aaPredicted RBP14.38□□□□□ -0.11
TPM3-202ENST00000302206 NDUFB9Q9Y6M9 179 aa14.38□□□□□ -0.11
TPM3-202ENST00000302206 RPAP1Q9BWH6 1393 aaPredicted RBP14.37□□□□□ -0.11
TPM3-202ENST00000302206 MCAMP43121 646 aa14.37□□□□□ -0.11
TPM3-202ENST00000302206 ZAP70P43403 619 aa14.37□□□□□ -0.11
TPM3-202ENST00000302206 FKBP4Q02790 459 aaKnown RBP eCLIP14.37□□□□□ -0.11
TPM3-202ENST00000302206 SCARF1Q14162 830 aa14.37□□□□□ -0.11
TPM3-202ENST00000302206 VPS53Q5VIR6 699 aa14.37□□□□□ -0.11
TPM3-202ENST00000302206 BICDL1Q6ZP65 573 aa14.37□□□□□ -0.11
TPM3-202ENST00000302206 TMX3Q96JJ7 454 aa14.37□□□□□ -0.11
TPM3-202ENST00000302206 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.37□□□□□ -0.11
TPM3-202ENST00000302206 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.36□□□□□ -0.11
TPM3-202ENST00000302206 CHRNDQ07001 517 aa14.36□□□□□ -0.11
TPM3-202ENST00000302206 UBE4AQ14139 1066 aa14.36□□□□□ -0.11
TPM3-202ENST00000302206 RAB3GAP1Q15042 981 aa14.36□□□□□ -0.11
TPM3-202ENST00000302206 C3orf67Q6ZVT6 689 aa14.36□□□□□ -0.11
TPM3-202ENST00000302206 SMIM5Q71RC9 77 aa14.36□□□□□ -0.11
TPM3-202ENST00000302206 APPBP2Q92624 585 aa14.36□□□□□ -0.11
TPM3-202ENST00000302206 CYP46A1Q9Y6A2 500 aa14.36□□□□□ -0.11
TPM3-202ENST00000302206 MYH7P12883 1935 aa14.36□□□□□ -0.11
TPM3-202ENST00000302206 PHKA1P46020 1223 aa14.35□□□□□ -0.11
TPM3-202ENST00000302206 NUCB2P80303 420 aa14.35□□□□□ -0.11
TPM3-202ENST00000302206 NFIXQ14938 502 aa14.35□□□□□ -0.11
TPM3-202ENST00000302206 MSL1Q68DK7 614 aa14.35□□□□□ -0.11
TPM3-202ENST00000302206 RUFY3Q7L099 469 aa14.35□□□□□ -0.11
TPM3-202ENST00000302206 HELBQ8NG08 1087 aaPredicted RBP14.35□□□□□ -0.11
TPM3-202ENST00000302206 JAKMIP1Q96N16 626 aaKnown RBP14.35□□□□□ -0.11
TPM3-202ENST00000302206 UPF3BQ9BZI7 483 aaKnown RBP14.35□□□□□ -0.11
TPM3-202ENST00000302206 MAST3O60307 1309 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms