RNA–Protein interactions for RNA: ENST00000301364.9

TSR1-201, Transcript of TSR1, ribosome maturation factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSR1, Length 5,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-201ENST00000301364 TRIM47Q96LD4 638 aa22.1■■□□□ 1.13
TSR1-201ENST00000301364 CCDC94Q9BW85 323 aaPredicted RBP22.1■■□□□ 1.13
TSR1-201ENST00000301364 CEP170Q5SW79 1584 aa22.1■■□□□ 1.13
TSR1-201ENST00000301364 ERVK-7P63135 1459 aa22.1■■□□□ 1.13
TSR1-201ENST00000301364 CRACR2BQ8N4Y2 399 aaPredicted RBP22.1■■□□□ 1.13
TSR1-201ENST00000301364 PLEKHF1Q96S99 279 aa22.1■■□□□ 1.13
TSR1-201ENST00000301364 FAM107BQ9H098 131 aa22.1■■□□□ 1.13
TSR1-201ENST00000301364 IDEP14735 1019 aa22.09■■□□□ 1.13
TSR1-201ENST00000301364 GTF2F1P35269 517 aaKnown RBP eCLIP22.09■■□□□ 1.13
TSR1-201ENST00000301364 NEFHP12036 1026 aa22.09■■□□□ 1.13
TSR1-201ENST00000301364 AFMP43652 599 aa22.09■■□□□ 1.13
TSR1-201ENST00000301364 ARHGEF10O15013 1369 aa22.09■■□□□ 1.13
TSR1-201ENST00000301364 GNAQP50148 359 aa22.09■■□□□ 1.13
TSR1-201ENST00000301364 CHST3Q7LGC8 479 aa22.09■■□□□ 1.13
TSR1-201ENST00000301364 TAX1BP1Q86VP1 789 aa22.09■■□□□ 1.13
TSR1-201ENST00000301364 TUBB4BP68371 445 aa22.08■■□□□ 1.13
TSR1-201ENST00000301364 SEPT7Q16181 437 aaKnown RBP22.08■■□□□ 1.13
TSR1-201ENST00000301364 ZMYND15Q9H091 742 aa22.08■■□□□ 1.13
TSR1-201ENST00000301364 TMOD2Q9NZR1 351 aa22.08■■□□□ 1.13
TSR1-201ENST00000301364 CCDC175P0C221 793 aa22.08■■□□□ 1.13
TSR1-201ENST00000301364 METTL22Q9BUU2 404 aaPredicted RBP22.08■■□□□ 1.13
TSR1-201ENST00000301364 CLSTN2Q9H4D0 955 aa22.08■■□□□ 1.12
TSR1-201ENST00000301364 IFNKQ9P0W0 207 aa22.08■■□□□ 1.12
TSR1-201ENST00000301364 CYLC1P35663 651 aaPredicted RBP22.08■■□□□ 1.12
TSR1-201ENST00000301364 CCDC96Q2M329 555 aa22.08■■□□□ 1.12
TSR1-201ENST00000301364 TNNI3KQ59H18 835 aa22.08■■□□□ 1.12
TSR1-201ENST00000301364 FPGT-TNNI3KV9GXZ4 949 aa22.08■■□□□ 1.12
TSR1-201ENST00000301364 PLEKHG3A1L390 1219 aa22.07■■□□□ 1.12
TSR1-201ENST00000301364 CCDC40Q4G0X9 1142 aa22.07■■□□□ 1.12
TSR1-201ENST00000301364 ZSWIM4Q9H7M6 989 aa22.07■■□□□ 1.12
TSR1-201ENST00000301364 CKAP4Q07065 602 aaKnown RBP22.07■■□□□ 1.12
TSR1-201ENST00000301364 SIRT1Q96EB6 747 aa22.07■■□□□ 1.12
TSR1-201ENST00000301364 CALM1P0DP23 149 aa22.07■■□□□ 1.12
TSR1-201ENST00000301364 CALM2P0DP24 149 aa22.07■■□□□ 1.12
TSR1-201ENST00000301364 CALM3P0DP25 149 aa22.07■■□□□ 1.12
TSR1-201ENST00000301364 TRIM21P19474 475 aaKnown RBP22.07■■□□□ 1.12
TSR1-201ENST00000301364 CTAGE15A4D2H0 777 aa22.07■■□□□ 1.12
TSR1-201ENST00000301364 CTAGE8P0CG41 777 aa22.07■■□□□ 1.12
TSR1-201ENST00000301364 CTAGE6Q86UF2 777 aa22.07■■□□□ 1.12
TSR1-201ENST00000301364 CTAGE4Q8IX94 777 aa22.07■■□□□ 1.12
TSR1-201ENST00000301364 TARBP1Q13395 1621 aaKnown RBP22.06■■□□□ 1.12
TSR1-201ENST00000301364 ZNF790Q6PG37 636 aa22.06■■□□□ 1.12
TSR1-201ENST00000301364 TMEM63CQ9P1W3 806 aa22.06■■□□□ 1.12
TSR1-201ENST00000301364 FEZ1Q99689 392 aa22.06■■□□□ 1.12
TSR1-201ENST00000301364 EXOC1Q9NV70 894 aa22.06■■□□□ 1.12
TSR1-201ENST00000301364 KCNA6P17658 529 aa22.06■■□□□ 1.12
TSR1-201ENST00000301364 TNIP1Q15025 636 aa22.06■■□□□ 1.12
TSR1-201ENST00000301364 STAT6P42226 847 aa22.05■■□□□ 1.12
TSR1-201ENST00000301364 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.05■■□□□ 1.12
TSR1-201ENST00000301364 CEP112Q8N8E3 955 aa22.05■■□□□ 1.12
TSR1-201ENST00000301364 SSH3Q8TE77 659 aa22.05■■□□□ 1.12
TSR1-201ENST00000301364 JADE2Q9NQC1 790 aa22.05■■□□□ 1.12
TSR1-201ENST00000301364 PSMA7O14818 248 aa22.05■■□□□ 1.12
TSR1-201ENST00000301364 CTR9Q6PD62 1173 aa22.05■■□□□ 1.12
TSR1-201ENST00000301364 RTL9Q8NET4 1388 aa22.05■■□□□ 1.12
TSR1-201ENST00000301364 ELP1O95163 1332 aa22.05■■□□□ 1.12
TSR1-201ENST00000301364 EYA2O00167 538 aa22.05■■□□□ 1.12
TSR1-201ENST00000301364 AKR1B10O60218 316 aa22.05■■□□□ 1.12
TSR1-201ENST00000301364 CETN2P41208 172 aa22.05■■□□□ 1.12
TSR1-201ENST00000301364 HSP90AA4PQ58FG1 418 aa22.05■■□□□ 1.12
TSR1-201ENST00000301364 ANKRD18AQ8IVF6 992 aa22.05■■□□□ 1.12
TSR1-201ENST00000301364 ZHX1Q9UKY1 873 aaPredicted RBP22.05■■□□□ 1.12
TSR1-201ENST00000301364 TTC37Q6PGP7 1564 aa22.05■■□□□ 1.12
TSR1-201ENST00000301364 MYL5Q02045 173 aa22.04■■□□□ 1.12
TSR1-201ENST00000301364 PLBD2Q8NHP8 589 aa22.04■■□□□ 1.12
TSR1-201ENST00000301364 FAM227BQ96M60 508 aa22.04■■□□□ 1.12
TSR1-201ENST00000301364 MYOM2P54296 1465 aa22.04■■□□□ 1.12
TSR1-201ENST00000301364 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP22.04■■□□□ 1.122e-34■□□□□ 9.9
TSR1-201ENST00000301364 UBA5Q9GZZ9 404 aa22.04■■□□□ 1.12
TSR1-201ENST00000301364 LEO1Q8WVC0 666 aaPredicted RBP22.04■■□□□ 1.12
TSR1-201ENST00000301364 PPP1R9BQ96SB3 815 aa22.04■■□□□ 1.12
TSR1-201ENST00000301364 GSTO1P78417 241 aa22.03■■□□□ 1.12
TSR1-201ENST00000301364 ENOX2Q16206 610 aaKnown RBP22.03■■□□□ 1.12
TSR1-201ENST00000301364 RPGRQ92834 1020 aaKnown RBP22.03■■□□□ 1.12
TSR1-201ENST00000301364 GADD45BO75293 160 aaPredicted RBP22.03■■□□□ 1.12
TSR1-201ENST00000301364 POTEJP0CG39 1038 aa22.03■■□□□ 1.12
TSR1-201ENST00000301364 CALML3P27482 149 aa22.03■■□□□ 1.12
TSR1-201ENST00000301364 LMAN1P49257 510 aa22.03■■□□□ 1.12
TSR1-201ENST00000301364 KRI1Q8N9T8 703 aaKnown RBP22.03■■□□□ 1.12
TSR1-201ENST00000301364 CUL5Q93034 780 aa22.03■■□□□ 1.12
TSR1-201ENST00000301364 DHX58Q96C10 678 aa22.03■■□□□ 1.12
TSR1-201ENST00000301364 AEBP2Q6ZN18 517 aaPredicted RBP22.03■■□□□ 1.12
TSR1-201ENST00000301364 GTPBP4Q9BZE4 634 aaKnown RBP22.03■■□□□ 1.12
TSR1-201ENST00000301364 A0A1B0GVL5 298 aa22.03■■□□□ 1.12
TSR1-201ENST00000301364 NAA16Q6N069 864 aaPredicted RBP22.03■■□□□ 1.12
TSR1-201ENST00000301364 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.03■■□□□ 1.124e-6■■■■■ 48.9
TSR1-201ENST00000301364 DBNDD2Q9BQY9 259 aa22.02■■□□□ 1.12
TSR1-201ENST00000301364 STX8Q9UNK0 236 aa22.02■■□□□ 1.12
TSR1-201ENST00000301364 ABCA8O94911 1581 aa22.02■■□□□ 1.12
TSR1-201ENST00000301364 MICALCLQ6ZW33 695 aa22.02■■□□□ 1.12
TSR1-201ENST00000301364 KBTBD3Q8NAB2 608 aa22.02■■□□□ 1.12
TSR1-201ENST00000301364 GOLGA1Q92805 767 aa22.02■■□□□ 1.12
TSR1-201ENST00000301364 WWC2Q6AWC2 1192 aa22.02■■□□□ 1.11
TSR1-201ENST00000301364 PRDM15P57071 1507 aaPredicted RBP22.02■■□□□ 1.11
TSR1-201ENST00000301364 IL2RBP14784 551 aa22.01■■□□□ 1.11
TSR1-201ENST00000301364 USP44Q9H0E7 712 aa22.01■■□□□ 1.11
TSR1-201ENST00000301364 C19orf44Q9H6X5 657 aa22.01■■□□□ 1.11
TSR1-201ENST00000301364 CTAGE9A4FU28 777 aa22.01■■□□□ 1.11
TSR1-201ENST00000301364 EIF4A1P60842 406 aaKnown RBP22.01■■□□□ 1.11
TSR1-201ENST00000301364 LGR6Q9HBX8 967 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 161.1 ms