RNA–Protein interactions for RNA: ENST00000299440.5

RAG1-201, Transcript of recombination activating 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAG1, Length 6,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAG1-201ENST00000299440 DDX39AO00148 427 aaKnown RBP8.18□□□□□ -1.1
RAG1-201ENST00000299440 MBD4O95243 580 aa8.18□□□□□ -1.1
RAG1-201ENST00000299440 FGFR1OPO95684 399 aaKnown RBP8.18□□□□□ -1.1
RAG1-201ENST00000299440 ZRSR2Q15696 482 aaKnown RBP8.18□□□□□ -1.1
RAG1-201ENST00000299440 ERFEQ4G0M1 354 aa8.18□□□□□ -1.1
RAG1-201ENST00000299440 MAPKAPK5Q8IW41 473 aa8.18□□□□□ -1.1
RAG1-201ENST00000299440 IMPG2Q9BZV3 1241 aa8.18□□□□□ -1.1
RAG1-201ENST00000299440 HSP90B2PQ58FF3 399 aa8.18□□□□□ -1.1
RAG1-201ENST00000299440 PROCA1Q8NCQ7 364 aaPredicted RBP8.18□□□□□ -1.1
RAG1-201ENST00000299440 CNNM3Q8NE01 707 aa8.18□□□□□ -1.1
RAG1-201ENST00000299440 BICC1Q9H694 974 aaKnown RBP8.18□□□□□ -1.1
RAG1-201ENST00000299440 AS3MTQ9HBK9 375 aa8.18□□□□□ -1.1
RAG1-201ENST00000299440 USP40Q9NVE5 1235 aa8.18□□□□□ -1.1
RAG1-201ENST00000299440 CLRN2A0PK11 232 aa8.18□□□□□ -1.1
RAG1-201ENST00000299440 PARP1P09874 1014 aaKnown RBP8.18□□□□□ -1.1
RAG1-201ENST00000299440 CFAP100Q494V2 611 aa8.18□□□□□ -1.1
RAG1-201ENST00000299440 DCAF15Q66K64 600 aa8.18□□□□□ -1.1
RAG1-201ENST00000299440 RGS22Q8NE09 1264 aa8.18□□□□□ -1.1
RAG1-201ENST00000299440 PLBD2Q8NHP8 589 aa8.18□□□□□ -1.1
RAG1-201ENST00000299440 LOC102724428A0A0B4J2F2 783 aa8.17□□□□□ -1.1
RAG1-201ENST00000299440 CBFA2T2O43439 604 aa8.17□□□□□ -1.1
RAG1-201ENST00000299440 SIK1P57059 783 aa8.17□□□□□ -1.1
RAG1-201ENST00000299440 R3HDM1Q15032 1099 aaKnown RBP8.17□□□□□ -1.1
RAG1-201ENST00000299440 USH1GQ495M9 461 aa8.17□□□□□ -1.1
RAG1-201ENST00000299440 MFSD14BQ5SR56 506 aa8.17□□□□□ -1.1
RAG1-201ENST00000299440 NCAPG2Q86XI2 1143 aa8.17□□□□□ -1.1
RAG1-201ENST00000299440 WDR66Q8TBY9 1149 aa8.17□□□□□ -1.1
RAG1-201ENST00000299440 KIFC2Q96AC6 838 aa8.17□□□□□ -1.1
RAG1-201ENST00000299440 SSX2IPQ9Y2D8 614 aa8.17□□□□□ -1.1
RAG1-201ENST00000299440 GBP2P32456 591 aaPredicted RBP8.17□□□□□ -1.1
RAG1-201ENST00000299440 CCDC112Q8NEF3 446 aa8.17□□□□□ -1.1
RAG1-201ENST00000299440 ACBD3Q9H3P7 528 aa8.17□□□□□ -1.1
RAG1-201ENST00000299440 RBM6P78332 1123 aaKnown RBP8.17□□□□□ -1.1
RAG1-201ENST00000299440 PUM3Q15397 648 aaKnown RBP8.17□□□□□ -1.1
RAG1-201ENST00000299440 TCEANC2Q96MN5 208 aa8.17□□□□□ -1.1
RAG1-201ENST00000299440 NUP62CLQ9H1M0 184 aa8.17□□□□□ -1.1
RAG1-201ENST00000299440 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.17□□□□□ -1.1
RAG1-201ENST00000299440 GNAT2P19087 354 aa8.17□□□□□ -1.1
RAG1-201ENST00000299440 AZI2Q9H6S1 392 aa8.17□□□□□ -1.1
RAG1-201ENST00000299440 RAD17O75943 681 aa8.17□□□□□ -1.1
RAG1-201ENST00000299440 HMGN5P82970 282 aaKnown RBP8.17□□□□□ -1.1
RAG1-201ENST00000299440 PABPC4Q13310 644 aaKnown RBP eCLIP8.17□□□□□ -1.1
RAG1-201ENST00000299440 ARMC9Q7Z3E5 817 aa8.17□□□□□ -1.1
RAG1-201ENST00000299440 TEKT1Q969V4 418 aa8.17□□□□□ -1.1
RAG1-201ENST00000299440 NACA2Q9H009 215 aa8.17□□□□□ -1.1
RAG1-201ENST00000299440 TSPOAP1O95153 1857 aa8.16□□□□□ -1.1
RAG1-201ENST00000299440 RPS8P62241 208 aaKnown RBP8.16□□□□□ -1.1
RAG1-201ENST00000299440 RNF181Q9P0P0 153 aa8.16□□□□□ -1.1
RAG1-201ENST00000299440 KIAA0232Q92628 1395 aa8.16□□□□□ -1.1
RAG1-201ENST00000299440 KRT13P13646 458 aa8.16□□□□□ -1.1
RAG1-201ENST00000299440 LMAN1P49257 510 aa8.16□□□□□ -1.1
RAG1-201ENST00000299440 DPP9Q86TI2 863 aa8.16□□□□□ -1.1
RAG1-201ENST00000299440 TGFBRAP1Q8WUH2 860 aa8.16□□□□□ -1.1
RAG1-201ENST00000299440 BRF1Q92994 677 aa8.16□□□□□ -1.1
RAG1-201ENST00000299440 GOPCQ9HD26 462 aa8.16□□□□□ -1.1
RAG1-201ENST00000299440 DDX21Q9NR30 783 aaKnown RBP eCLIP8.16□□□□□ -1.1
RAG1-201ENST00000299440 KIF21AQ7Z4S6 1674 aa8.16□□□□□ -1.1
RAG1-201ENST00000299440 PPEF1O14829 653 aaPredicted RBP8.16□□□□□ -1.1
RAG1-201ENST00000299440 FAM13AO94988 1023 aa8.16□□□□□ -1.1
RAG1-201ENST00000299440 SERPINB2P05120 415 aa8.16□□□□□ -1.1
RAG1-201ENST00000299440 SETQ01105 290 aaPredicted RBP8.16□□□□□ -1.1
RAG1-201ENST00000299440 APBB1IPQ7Z5R6 666 aaPredicted RBP8.16□□□□□ -1.1
RAG1-201ENST00000299440 USP37Q86T82 979 aa8.16□□□□□ -1.1
RAG1-201ENST00000299440 TMTC2Q8N394 836 aa8.16□□□□□ -1.1
RAG1-201ENST00000299440 UIMC1Q96RL1 719 aa8.16□□□□□ -1.1
RAG1-201ENST00000299440 ARGLU1Q9NWB6 273 aaPredicted RBP8.16□□□□□ -1.1
RAG1-201ENST00000299440 PRDM1O75626 825 aa8.16□□□□□ -1.1
RAG1-201ENST00000299440 HSPA1LP34931 641 aa8.16□□□□□ -1.1
RAG1-201ENST00000299440 SLC1A4P43007 532 aa8.16□□□□□ -1.1
RAG1-201ENST00000299440 SKIV2LQ15477 1246 aaKnown RBP8.16□□□□□ -1.1
RAG1-201ENST00000299440 SPA17Q15506 151 aa8.16□□□□□ -1.1
RAG1-201ENST00000299440 ARMT1Q9H993 441 aa8.16□□□□□ -1.1
RAG1-201ENST00000299440 EXOC1Q9NV70 894 aa8.16□□□□□ -1.1
RAG1-201ENST00000299440 MRVI1Q9Y6F6 885 aa8.16□□□□□ -1.1
RAG1-201ENST00000299440 TIMM10P62072 90 aa8.15□□□□□ -1.1
RAG1-201ENST00000299440 MCMDC2Q4G0Z9 681 aa8.15□□□□□ -1.1
RAG1-201ENST00000299440 OTUD6BQ8N6M0 293 aa8.15□□□□□ -1.1
RAG1-201ENST00000299440 SPON1Q9HCB6 807 aa8.15□□□□□ -1.1
RAG1-201ENST00000299440 RXRAP19793 462 aa8.15□□□□□ -1.1
RAG1-201ENST00000299440 TAF3Q5VWG9 929 aa8.15□□□□□ -1.1
RAG1-201ENST00000299440 TNPO1Q92973 898 aaKnown RBP8.15□□□□□ -1.1
RAG1-201ENST00000299440 ZNF496Q96IT1 587 aaPredicted RBP8.15□□□□□ -1.1
RAG1-201ENST00000299440 DBNDD1Q9H9R9 158 aa8.15□□□□□ -1.1
RAG1-201ENST00000299440 STK25O00506 426 aa8.15□□□□□ -1.1
RAG1-201ENST00000299440 CRKLP46109 303 aaKnown RBP8.15□□□□□ -1.1
RAG1-201ENST00000299440 BMS1Q14692 1282 aaKnown RBP8.15□□□□□ -1.1
RAG1-201ENST00000299440 FILIP1Q7Z7B0 1213 aa8.15□□□□□ -1.1
RAG1-201ENST00000299440 A0A1W2PP64 1363 aa8.15□□□□□ -1.1
RAG1-201ENST00000299440 GSTTP1A0A1W2PQM5 241 aa8.15□□□□□ -1.11
RAG1-201ENST00000299440 RNF113AO15541 343 aaKnown RBP8.15□□□□□ -1.11
RAG1-201ENST00000299440 KCNA4P22459 653 aa8.15□□□□□ -1.11
RAG1-201ENST00000299440 FMNL1O95466 1100 aaPredicted RBP8.15□□□□□ -1.11
RAG1-201ENST00000299440 ARL1P40616 181 aaPredicted RBP8.15□□□□□ -1.11
RAG1-201ENST00000299440 KLHDC4Q8TBB5 520 aa8.15□□□□□ -1.11
RAG1-201ENST00000299440 CPLX3Q8WVH0 158 aa8.15□□□□□ -1.11
RAG1-201ENST00000299440 FERMT1Q9BQL6 677 aa8.15□□□□□ -1.11
RAG1-201ENST00000299440 SMTNL1A8MU46 457 aa8.14□□□□□ -1.11
RAG1-201ENST00000299440 UQCRHP07919 91 aa8.14□□□□□ -1.11
RAG1-201ENST00000299440 MMP10P09238 476 aa8.14□□□□□ -1.11
RAG1-201ENST00000299440 CALML3P27482 149 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms