RNA–Protein interactions for RNA: ENST00000297265.4

CHMP4C-201, Transcript of charged multivesicular body protein 4C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4C, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4C-201ENST00000297265 LARGE1O95461 756 aa16.29■□□□□ 0.2
CHMP4C-201ENST00000297265 CYP21A2P08686 494 aa16.29■□□□□ 0.2
CHMP4C-201ENST00000297265 ARID4AP29374 1257 aaPredicted RBP16.29■□□□□ 0.2
CHMP4C-201ENST00000297265 PHKA1P46020 1223 aa16.29■□□□□ 0.2
CHMP4C-201ENST00000297265 KCNJ4P48050 445 aa16.29■□□□□ 0.2
CHMP4C-201ENST00000297265 NUCB2P80303 420 aa16.29■□□□□ 0.2
CHMP4C-201ENST00000297265 PUM3Q15397 648 aaKnown RBP16.29■□□□□ 0.2
CHMP4C-201ENST00000297265 LPIN2Q92539 896 aa16.29■□□□□ 0.2
CHMP4C-201ENST00000297265 LIMCH1Q9UPQ0 1083 aa16.29■□□□□ 0.2
CHMP4C-201ENST00000297265 M0R2C6 588 aa16.29■□□□□ 0.2
CHMP4C-201ENST00000297265 BICDL1Q6ZP65 573 aa16.29■□□□□ 0.2
CHMP4C-201ENST00000297265 PDRG1Q9NUG6 133 aa16.29■□□□□ 0.2
CHMP4C-201ENST00000297265 HMG20BQ9P0W2 317 aa16.29■□□□□ 0.2
CHMP4C-201ENST00000297265 RTCBQ9Y3I0 505 aaKnown RBP16.29■□□□□ 0.2
CHMP4C-201ENST00000297265 CYP46A1Q9Y6A2 500 aa16.29■□□□□ 0.2
CHMP4C-201ENST00000297265 BRWD3Q6RI45 1802 aa16.29■□□□□ 0.2
CHMP4C-201ENST00000297265 C4AP0C0L4 1744 aa16.28■□□□□ 0.2
CHMP4C-201ENST00000297265 HSPD1P10809 573 aaKnown RBP16.28■□□□□ 0.2
CHMP4C-201ENST00000297265 HSP90B1P14625 803 aaKnown RBP16.28■□□□□ 0.2
CHMP4C-201ENST00000297265 GSE1Q14687 1217 aa16.28■□□□□ 0.2
CHMP4C-201ENST00000297265 RNF20Q5VTR2 975 aa16.28■□□□□ 0.2
CHMP4C-201ENST00000297265 MPHOSPH8Q99549 860 aa16.28■□□□□ 0.2
CHMP4C-201ENST00000297265 DSCC1Q9BVC3 393 aa16.28■□□□□ 0.2
CHMP4C-201ENST00000297265 MYH7P12883 1935 aa16.28■□□□□ 0.2
CHMP4C-201ENST00000297265 ST3GAL1Q11201 340 aa16.27■□□□□ 0.2
CHMP4C-201ENST00000297265 ALDH8A1Q9H2A2 487 aaPredicted RBP16.27■□□□□ 0.2
CHMP4C-201ENST00000297265 U3KPZ7 1027 aaPredicted RBP16.27■□□□□ 0.2
CHMP4C-201ENST00000297265 A0A0G2JLW4 131 aa16.27■□□□□ 0.19
CHMP4C-201ENST00000297265 BAG4O95429 457 aaKnown RBP16.27■□□□□ 0.19
CHMP4C-201ENST00000297265 RPS6KB1P23443 525 aa16.26■□□□□ 0.19
CHMP4C-201ENST00000297265 PSMA5P28066 241 aa16.26■□□□□ 0.19
CHMP4C-201ENST00000297265 CHRNDQ07001 517 aa16.26■□□□□ 0.19
CHMP4C-201ENST00000297265 STOX1Q6ZVD7 989 aa16.26■□□□□ 0.19
CHMP4C-201ENST00000297265 PUS7LQ9H0K6 701 aaKnown RBP16.26■□□□□ 0.19
CHMP4C-201ENST00000297265 A0A1B0GUL6 1792 aa16.26■□□□□ 0.19
CHMP4C-201ENST00000297265 WTIPA6NIX2 430 aaPredicted RBP16.25■□□□□ 0.19
CHMP4C-201ENST00000297265 ZPR1O75312 459 aa16.25■□□□□ 0.19
CHMP4C-201ENST00000297265 ZFYP08048 801 aaPredicted RBP16.25■□□□□ 0.19
CHMP4C-201ENST00000297265 IGHMBP2P38935 993 aaKnown RBP16.25■□□□□ 0.19
CHMP4C-201ENST00000297265 TOB2Q14106 344 aaPredicted RBP16.25■□□□□ 0.19
CHMP4C-201ENST00000297265 ME3Q16798 604 aa16.25■□□□□ 0.19
CHMP4C-201ENST00000297265 FAM196AQ6ZSG2 479 aa16.25■□□□□ 0.19
CHMP4C-201ENST00000297265 GBP4Q96PP9 640 aa16.25■□□□□ 0.19
CHMP4C-201ENST00000297265 SETDB2Q96T68 719 aa16.25■□□□□ 0.19
CHMP4C-201ENST00000297265 PIH1D3Q9NQM4 214 aaKnown RBP16.25■□□□□ 0.19
CHMP4C-201ENST00000297265 TPCN1Q9ULQ1 816 aa16.25■□□□□ 0.19
CHMP4C-201ENST00000297265 BRD1O95696 1058 aa16.25■□□□□ 0.19
CHMP4C-201ENST00000297265 TCEANC2Q96MN5 208 aa16.25■□□□□ 0.19
CHMP4C-201ENST00000297265 LAMA4Q16363 1823 aa16.24■□□□□ 0.19
CHMP4C-201ENST00000297265 DDX11L8A8MPP1 907 aa16.24■□□□□ 0.19
CHMP4C-201ENST00000297265 TRAK2O60296 914 aa16.24■□□□□ 0.19
CHMP4C-201ENST00000297265 ADD2P35612 726 aa16.24■□□□□ 0.19
CHMP4C-201ENST00000297265 BLOC1S2Q6QNY1 142 aa16.24■□□□□ 0.19
CHMP4C-201ENST00000297265 APPBP2Q92624 585 aa16.24■□□□□ 0.19
CHMP4C-201ENST00000297265 CELF1Q92879 486 aaKnown RBP16.24■□□□□ 0.19
CHMP4C-201ENST00000297265 UQCRFS1P1P0C7P4 283 aa16.23■□□□□ 0.19
CHMP4C-201ENST00000297265 SLC5A1P13866 664 aa16.23■□□□□ 0.19
CHMP4C-201ENST00000297265 TM4SF1P30408 202 aa16.23■□□□□ 0.19
CHMP4C-201ENST00000297265 RASGRF1Q13972 1273 aa16.23■□□□□ 0.19
CHMP4C-201ENST00000297265 TRAPPC3LQ5T215 181 aa16.23■□□□□ 0.19
CHMP4C-201ENST00000297265 NEK1Q96PY6 1258 aa16.23■□□□□ 0.19
CHMP4C-201ENST00000297265 CDC5LQ99459 802 aaKnown RBP16.23■□□□□ 0.19
CHMP4C-201ENST00000297265 BSDC1Q9NW68 430 aaPredicted RBP16.23■□□□□ 0.19
CHMP4C-201ENST00000297265 UBR3Q6ZT12 1888 aa16.23■□□□□ 0.19
CHMP4C-201ENST00000297265 TCRBV5S4A2TA0A5A2 114 aa16.22■□□□□ 0.19
CHMP4C-201ENST00000297265 BCAMP50895 628 aa16.22■□□□□ 0.19
CHMP4C-201ENST00000297265 KRT32Q14532 448 aa16.22■□□□□ 0.19
CHMP4C-201ENST00000297265 KRT27Q7Z3Y8 459 aa16.22■□□□□ 0.19
CHMP4C-201ENST00000297265 CCDC24Q8N4L8 307 aa16.22■□□□□ 0.19
CHMP4C-201ENST00000297265 CHAMP1Q96JM3 812 aa16.22■□□□□ 0.19
CHMP4C-201ENST00000297265 NYXQ9GZU5 481 aa16.22■□□□□ 0.19
CHMP4C-201ENST00000297265 DOCK2Q92608 1830 aa16.22■□□□□ 0.19
CHMP4C-201ENST00000297265 LRRFIP1Q32MZ4 808 aaKnown RBP16.22■□□□□ 0.19
CHMP4C-201ENST00000297265 TTLL5Q6EMB2 1281 aa16.22■□□□□ 0.19
CHMP4C-201ENST00000297265 NBPF5PQ86XG9 351 aaPredicted RBP16.22■□□□□ 0.19
CHMP4C-201ENST00000297265 PROM2Q8N271 834 aa16.22■□□□□ 0.19
CHMP4C-201ENST00000297265 SPATA5Q8NB90 893 aa16.22■□□□□ 0.19
CHMP4C-201ENST00000297265 ZSCAN31Q96LW9 406 aaPredicted RBP16.22■□□□□ 0.19
CHMP4C-201ENST00000297265 MINPP1Q9UNW1 487 aa16.22■□□□□ 0.19
CHMP4C-201ENST00000297265 DTNBO60941 627 aa16.21■□□□□ 0.19
CHMP4C-201ENST00000297265 PHF14O94880 888 aa16.21■□□□□ 0.19
CHMP4C-201ENST00000297265 TTF1Q15361 905 aaPredicted RBP16.21■□□□□ 0.19
CHMP4C-201ENST00000297265 WASHC4Q2M389 1173 aa16.21■□□□□ 0.19
CHMP4C-201ENST00000297265 SLC9C2Q5TAH2 1124 aa16.21■□□□□ 0.19
CHMP4C-201ENST00000297265 TPTE2Q6XPS3 522 aa16.21■□□□□ 0.19
CHMP4C-201ENST00000297265 ANKRD18AQ8IVF6 992 aa16.21■□□□□ 0.19
CHMP4C-201ENST00000297265 SH2B1Q9NRF2 756 aaPredicted RBP16.21■□□□□ 0.19
CHMP4C-201ENST00000297265 GTF2E1P29083 439 aaPredicted RBP16.2■□□□□ 0.18
CHMP4C-201ENST00000297265 RFC4P35249 363 aa16.2■□□□□ 0.18
CHMP4C-201ENST00000297265 UBE3CQ15386 1083 aa16.2■□□□□ 0.18
CHMP4C-201ENST00000297265 WWC3Q9ULE0 1092 aa16.2■□□□□ 0.18
CHMP4C-201ENST00000297265 GPAA1O43292 621 aa16.2■□□□□ 0.18
CHMP4C-201ENST00000297265 TRIM37O94972 964 aa16.2■□□□□ 0.18
CHMP4C-201ENST00000297265 FGAP02671 866 aa16.2■□□□□ 0.18
CHMP4C-201ENST00000297265 EXOSC10Q01780 885 aaKnown RBP16.2■□□□□ 0.18
CHMP4C-201ENST00000297265 NFIXQ14938 502 aa16.2■□□□□ 0.18
CHMP4C-201ENST00000297265 CCDC83Q8IWF9 413 aa16.2■□□□□ 0.18
CHMP4C-201ENST00000297265 NECAB1Q8N987 351 aa16.2■□□□□ 0.18
CHMP4C-201ENST00000297265 NLRP3Q96P20 1036 aa16.2■□□□□ 0.18
CHMP4C-201ENST00000297265 ZNF804BA4D1E1 1349 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms