RNA–Protein interactions for RNA: ENST00000296046.3

CPA3-201, Transcript of carboxypeptidase A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPA3, Length 1,795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPA3-201ENST00000296046 SYNE3Q6ZMZ3 975 aa6.95□□□□□ -1.3
CPA3-201ENST00000296046 DRC7Q8IY82 874 aa6.95□□□□□ -1.3
CPA3-201ENST00000296046 PMFBP1Q8TBY8 1022 aa6.95□□□□□ -1.3
CPA3-201ENST00000296046 MPP4Q96JB8 637 aa6.95□□□□□ -1.3
CPA3-201ENST00000296046 TRIM7Q9C029 511 aa6.95□□□□□ -1.3
CPA3-201ENST00000296046 KIAA1522Q9P206 1035 aaPredicted RBP6.95□□□□□ -1.3
CPA3-201ENST00000296046 CHPF2Q9P2E5 772 aa6.95□□□□□ -1.3
CPA3-201ENST00000296046 TFIP11Q9UBB9 837 aaKnown RBP6.95□□□□□ -1.3
CPA3-201ENST00000296046 SCINQ9Y6U3 715 aa6.95□□□□□ -1.3
CPA3-201ENST00000296046 KIAA1107Q9UPP5 1409 aa6.94□□□□□ -1.3
CPA3-201ENST00000296046 PABPN1LA6NDY0 278 aaKnown RBP6.94□□□□□ -1.3
CPA3-201ENST00000296046 PPFIA3O75145 1194 aa6.94□□□□□ -1.3
CPA3-201ENST00000296046 GIGYF1O75420 1035 aaPredicted RBP6.94□□□□□ -1.3
CPA3-201ENST00000296046 DCTN1Q14203 1278 aa6.94□□□□□ -1.3
CPA3-201ENST00000296046 FAM98CQ17RN3 349 aaKnown RBP6.94□□□□□ -1.3
CPA3-201ENST00000296046 HHATQ5VTY9 493 aa6.94□□□□□ -1.3
CPA3-201ENST00000296046 CCDC30Q5VVM6 783 aa6.94□□□□□ -1.3
CPA3-201ENST00000296046 KCNV1Q6PIU1 500 aa6.94□□□□□ -1.3
CPA3-201ENST00000296046 NEUROD6Q96NK8 337 aa6.94□□□□□ -1.3
CPA3-201ENST00000296046 DUSP9Q99956 384 aaKnown RBP6.94□□□□□ -1.3
CPA3-201ENST00000296046 TOPBP1Q92547 1522 aa6.94□□□□□ -1.3
CPA3-201ENST00000296046 PARD3Q8TEW0 1356 aa6.93□□□□□ -1.3
CPA3-201ENST00000296046 SPAG9O60271 1321 aaKnown RBP6.93□□□□□ -1.3
CPA3-201ENST00000296046 KDM2BQ8NHM5 1336 aa6.93□□□□□ -1.3
CPA3-201ENST00000296046 KDM6BO15054 1643 aa6.93□□□□□ -1.3
CPA3-201ENST00000296046 ARHGAP33O14559 1287 aa6.93□□□□□ -1.3
CPA3-201ENST00000296046 LMOD1P29536 600 aaPredicted RBP6.93□□□□□ -1.3
CPA3-201ENST00000296046 GJA8P48165 433 aa6.93□□□□□ -1.3
CPA3-201ENST00000296046 RPS6KA3P51812 740 aa6.93□□□□□ -1.3
CPA3-201ENST00000296046 IGBP1P78318 339 aa6.93□□□□□ -1.3
CPA3-201ENST00000296046 PDIA5Q14554 519 aa6.93□□□□□ -1.3
CPA3-201ENST00000296046 TTC19Q6DKK2 380 aaPredicted RBP6.93□□□□□ -1.3
CPA3-201ENST00000296046 CCDC146Q8IYE0 955 aa6.93□□□□□ -1.3
CPA3-201ENST00000296046 BICD1Q96G01 975 aa6.93□□□□□ -1.3
CPA3-201ENST00000296046 CEP63Q96MT8 703 aa6.93□□□□□ -1.3
CPA3-201ENST00000296046 PLEKHG4BQ96PX9 1271 aa6.93□□□□□ -1.3
CPA3-201ENST00000296046 SLC4A5Q9BY07 1137 aa6.93□□□□□ -1.3
CPA3-201ENST00000296046 HOXC10Q9NYD6 342 aa6.93□□□□□ -1.3
CPA3-201ENST00000296046 NOL7Q9UMY1 257 aaKnown RBP6.93□□□□□ -1.3
CPA3-201ENST00000296046 IKBKGQ9Y6K9 419 aa6.93□□□□□ -1.3
CPA3-201ENST00000296046 EPRSP07814 1512 aaKnown RBP6.93□□□□□ -1.3
CPA3-201ENST00000296046 MAGI3Q5TCQ9 1506 aa6.93□□□□□ -1.3
CPA3-201ENST00000296046 BCORL1Q5H9F3 1711 aa6.93□□□□□ -1.3
CPA3-201ENST00000296046 CCDC144AA2RUR9 1427 aa6.93□□□□□ -1.3
CPA3-201ENST00000296046 ZMYM3Q14202 1370 aa6.93□□□□□ -1.3
CPA3-201ENST00000296046 SBNO2Q9Y2G9 1366 aa6.93□□□□□ -1.3
CPA3-201ENST00000296046 F8VZ95 297 aa6.92□□□□□ -1.3
CPA3-201ENST00000296046 KRT38O76015 456 aa6.92□□□□□ -1.3
CPA3-201ENST00000296046 MTA2O94776 668 aa6.92□□□□□ -1.3
CPA3-201ENST00000296046 TPM1P09493 284 aa6.92□□□□□ -1.3
CPA3-201ENST00000296046 MSL3P1P0C860 447 aa6.92□□□□□ -1.3
CPA3-201ENST00000296046 PRPHP41219 470 aa6.92□□□□□ -1.3
CPA3-201ENST00000296046 SLC7A5Q01650 507 aa6.92□□□□□ -1.3
CPA3-201ENST00000296046 PTK7Q13308 1070 aa6.92□□□□□ -1.3
CPA3-201ENST00000296046 NOLC1Q14978 699 aaKnown RBP eCLIP6.92□□□□□ -1.3
CPA3-201ENST00000296046 TBC1D25Q3MII6 688 aa6.92□□□□□ -1.3
CPA3-201ENST00000296046 CCDC174Q6PII3 467 aa6.92□□□□□ -1.3
CPA3-201ENST00000296046 LEKR1Q6ZMV7 388 aa6.92□□□□□ -1.3
CPA3-201ENST00000296046 TRIM42Q8IWZ5 723 aa6.92□□□□□ -1.3
CPA3-201ENST00000296046 GAS2L2Q8NHY3 880 aa6.92□□□□□ -1.3
CPA3-201ENST00000296046 NEK9Q8TD19 979 aa6.92□□□□□ -1.3
CPA3-201ENST00000296046 C8orf37Q96NL8 207 aa6.92□□□□□ -1.3
CPA3-201ENST00000296046 TMEM63CQ9P1W3 806 aa6.92□□□□□ -1.3
CPA3-201ENST00000296046 KLF15Q9UIH9 416 aa6.92□□□□□ -1.3
CPA3-201ENST00000296046 CHD1O14646 1710 aa6.92□□□□□ -1.3
CPA3-201ENST00000296046 ADGRL2O95490 1459 aa6.92□□□□□ -1.3
CPA3-201ENST00000296046 ABCC5O15440 1437 aa6.92□□□□□ -1.3
CPA3-201ENST00000296046 BLMP54132 1417 aaPredicted RBP6.92□□□□□ -1.3
CPA3-201ENST00000296046 EIF3AQ14152 1382 aaKnown RBP6.92□□□□□ -1.3
CPA3-201ENST00000296046 hCG_2014768A0A024R1R8 64 aa6.92□□□□□ -1.3
CPA3-201ENST00000296046 NRG2O14511 850 aaPredicted RBP6.92□□□□□ -1.3
CPA3-201ENST00000296046 SLC27A2O14975 620 aa6.92□□□□□ -1.3
CPA3-201ENST00000296046 C21orf2O43822 256 aa6.92□□□□□ -1.3
CPA3-201ENST00000296046 RBM6P78332 1123 aaKnown RBP6.92□□□□□ -1.3
CPA3-201ENST00000296046 RASSF7Q02833 373 aa6.92□□□□□ -1.3
CPA3-201ENST00000296046 PSME1Q06323 249 aa6.92□□□□□ -1.3
CPA3-201ENST00000296046 WASHC5Q12768 1159 aa6.92□□□□□ -1.3
CPA3-201ENST00000296046 SFSWAPQ12872 951 aaKnown RBP6.92□□□□□ -1.3
CPA3-201ENST00000296046 FXNQ16595 210 aa6.92□□□□□ -1.3
CPA3-201ENST00000296046 ARHGEF25Q86VW2 580 aa6.92□□□□□ -1.3
CPA3-201ENST00000296046 SLF2Q8IX21 1173 aa6.92□□□□□ -1.3
CPA3-201ENST00000296046 MIGA1Q8NAN2 632 aa6.92□□□□□ -1.3
CPA3-201ENST00000296046 CCDC191Q8NCU4 936 aa6.92□□□□□ -1.3
CPA3-201ENST00000296046 MRRFQ96E11 262 aaKnown RBP6.92□□□□□ -1.3
CPA3-201ENST00000296046 THOC1Q96FV9 657 aaKnown RBP6.92□□□□□ -1.3
CPA3-201ENST00000296046 SPATS2LQ9NUQ6 558 aaKnown RBP6.92□□□□□ -1.3
CPA3-201ENST00000296046 VPS9D1Q9Y2B5 631 aa6.92□□□□□ -1.3
CPA3-201ENST00000296046 PZPP20742 1482 aa6.92□□□□□ -1.3
CPA3-201ENST00000296046 E9PCH4 1651 aa6.91□□□□□ -1.3
CPA3-201ENST00000296046 HARSP12081 509 aaKnown RBP6.91□□□□□ -1.3
CPA3-201ENST00000296046 ZNF24P17028 368 aa6.91□□□□□ -1.3
CPA3-201ENST00000296046 RPL17P18621 184 aaKnown RBP6.91□□□□□ -1.3
CPA3-201ENST00000296046 EVA1CP58658 441 aa6.91□□□□□ -1.3
CPA3-201ENST00000296046 MECOMQ03112 1051 aa6.91□□□□□ -1.3
CPA3-201ENST00000296046 KRT72Q14CN4 511 aa6.91□□□□□ -1.3
CPA3-201ENST00000296046 SART3Q15020 963 aaKnown RBP6.91□□□□□ -1.3
CPA3-201ENST00000296046 MSL1Q68DK7 614 aa6.91□□□□□ -1.3
CPA3-201ENST00000296046 NAIF1Q69YI7 327 aaPredicted RBP6.91□□□□□ -1.3
CPA3-201ENST00000296046 TBC1D9Q6ZT07 1266 aa6.91□□□□□ -1.3
CPA3-201ENST00000296046 SMARCC1Q92922 1105 aaPredicted RBP6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms