RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 FEZ1Q99689 392 aa14.61□□□□□ -0.07
PTCD1-201ENST00000292478 FBXO3Q9UK99 471 aa14.61□□□□□ -0.07
PTCD1-201ENST00000292478 NIP7Q9Y221 180 aaKnown RBP eCLIP14.61□□□□□ -0.07
PTCD1-201ENST00000292478 BLMP54132 1417 aaPredicted RBP14.61□□□□□ -0.07
PTCD1-201ENST00000292478 BMS1Q14692 1282 aaKnown RBP14.61□□□□□ -0.07
PTCD1-201ENST00000292478 MYO1BO43795 1136 aa14.61□□□□□ -0.07
PTCD1-201ENST00000292478 CLCN1P35523 988 aa14.61□□□□□ -0.07
PTCD1-201ENST00000292478 IFFO1Q0D2I5 559 aa14.61□□□□□ -0.07
PTCD1-201ENST00000292478 DDB1Q16531 1140 aa14.61□□□□□ -0.07
PTCD1-201ENST00000292478 RAB11FIP4Q86YS3 637 aa14.61□□□□□ -0.07
PTCD1-201ENST00000292478 RTL1A6NKG5 1358 aa14.61□□□□□ -0.07
PTCD1-201ENST00000292478 PBRM1Q86U86 1689 aa14.61□□□□□ -0.07
PTCD1-201ENST00000292478 ATP10AO60312 1499 aa14.61□□□□□ -0.07
PTCD1-201ENST00000292478 CALRP27797 417 aaKnown RBP14.61□□□□□ -0.07
PTCD1-201ENST00000292478 LRRC2Q9BYS8 371 aa14.61□□□□□ -0.07
PTCD1-201ENST00000292478 SAMD9Q5K651 1589 aa14.61□□□□□ -0.07
PTCD1-201ENST00000292478 PSMA7O14818 248 aa14.6□□□□□ -0.07
PTCD1-201ENST00000292478 TFCP2Q12800 502 aa14.6□□□□□ -0.07
PTCD1-201ENST00000292478 MICALCLQ6ZW33 695 aa14.6□□□□□ -0.07
PTCD1-201ENST00000292478 MPHOSPH6Q99547 160 aaKnown RBP14.6□□□□□ -0.07
PTCD1-201ENST00000292478 C6orf50Q9HD87 102 aa14.6□□□□□ -0.07
PTCD1-201ENST00000292478 TUBB4BP68371 445 aa14.6□□□□□ -0.07
PTCD1-201ENST00000292478 TCERG1LQ5VWI1 586 aa14.6□□□□□ -0.07
PTCD1-201ENST00000292478 ABCA5Q8WWZ7 1642 aa14.6□□□□□ -0.07
PTCD1-201ENST00000292478 CHL1O00533 1208 aa14.6□□□□□ -0.07
PTCD1-201ENST00000292478 GNG11P61952 73 aa14.6□□□□□ -0.07
PTCD1-201ENST00000292478 USP37Q86T82 979 aa14.6□□□□□ -0.07
PTCD1-201ENST00000292478 DYDC1Q8WWB3 177 aa14.6□□□□□ -0.07
PTCD1-201ENST00000292478 SCLT1Q96NL6 688 aa14.6□□□□□ -0.07
PTCD1-201ENST00000292478 SRRTQ9BXP5 876 aaKnown RBP14.6□□□□□ -0.07
PTCD1-201ENST00000292478 IRS4O14654 1257 aaPredicted RBP14.6□□□□□ -0.07
PTCD1-201ENST00000292478 CWF19L2Q2TBE0 894 aaKnown RBP14.6□□□□□ -0.07
PTCD1-201ENST00000292478 SIRT1Q96EB6 747 aa14.6□□□□□ -0.07
PTCD1-201ENST00000292478 XRCC6P12956 609 aaKnown RBP eCLIP14.6□□□□□ -0.07
PTCD1-201ENST00000292478 RBM28Q9NW13 759 aaKnown RBP14.6□□□□□ -0.07
PTCD1-201ENST00000292478 TPTE2Q6XPS3 522 aa14.59□□□□□ -0.07
PTCD1-201ENST00000292478 SYCP3Q8IZU3 236 aa14.59□□□□□ -0.07
PTCD1-201ENST00000292478 PLBD2Q8NHP8 589 aa14.59□□□□□ -0.07
PTCD1-201ENST00000292478 BICC1Q9H694 974 aaKnown RBP14.59□□□□□ -0.07
PTCD1-201ENST00000292478 NOLC1Q14978 699 aaKnown RBP eCLIP14.59□□□□□ -0.07
PTCD1-201ENST00000292478 TCEANC2Q96MN5 208 aa14.59□□□□□ -0.07
PTCD1-201ENST00000292478 SKILP12757 684 aa14.59□□□□□ -0.07
PTCD1-201ENST00000292478 KRT2P35908 639 aa14.59□□□□□ -0.07
PTCD1-201ENST00000292478 TYRO3Q06418 890 aa14.59□□□□□ -0.07
PTCD1-201ENST00000292478 CDCA7Q9BWT1 371 aaPredicted RBP14.59□□□□□ -0.07
PTCD1-201ENST00000292478 HDAC9Q9UKV0 1011 aa14.59□□□□□ -0.07
PTCD1-201ENST00000292478 ZKSCAN5Q9Y2L8 839 aa14.58□□□□□ -0.07
PTCD1-201ENST00000292478 MAP2K1Q02750 393 aaPredicted RBP14.58□□□□□ -0.08
PTCD1-201ENST00000292478 METTL22Q9BUU2 404 aaPredicted RBP14.58□□□□□ -0.08
PTCD1-201ENST00000292478 ADGBQ8N7X0 1667 aa14.58□□□□□ -0.08
PTCD1-201ENST00000292478 PTPDC1A2A3K4 754 aa14.58□□□□□ -0.08
PTCD1-201ENST00000292478 TOM1O60784 492 aa14.58□□□□□ -0.08
PTCD1-201ENST00000292478 DDX12PQ92771 950 aa14.58□□□□□ -0.08
PTCD1-201ENST00000292478 AKR1B10O60218 316 aa14.58□□□□□ -0.08
PTCD1-201ENST00000292478 ISM2Q6H9L7 571 aa14.58□□□□□ -0.08
PTCD1-201ENST00000292478 GSTTP1A0A1W2PQM5 241 aa14.58□□□□□ -0.08
PTCD1-201ENST00000292478 TBC1D5Q92609 795 aa14.58□□□□□ -0.08
PTCD1-201ENST00000292478 LLPHQ9BRT6 129 aaKnown RBP14.58□□□□□ -0.08
PTCD1-201ENST00000292478 KDM2BQ8NHM5 1336 aa14.57□□□□□ -0.08
PTCD1-201ENST00000292478 TMCO5BA8MYB1 307 aa14.57□□□□□ -0.08
PTCD1-201ENST00000292478 HEATR3Q7Z4Q2 680 aa14.57□□□□□ -0.08
PTCD1-201ENST00000292478 NAP1L4Q99733 375 aaKnown RBP14.57□□□□□ -0.08
PTCD1-201ENST00000292478 GCC2Q8IWJ2 1684 aa14.57□□□□□ -0.08
PTCD1-201ENST00000292478 ARHGEF10O15013 1369 aa14.57□□□□□ -0.08
PTCD1-201ENST00000292478 KIAA0232Q92628 1395 aa14.57□□□□□ -0.08
PTCD1-201ENST00000292478 AFMP43652 599 aa14.57□□□□□ -0.08
PTCD1-201ENST00000292478 NAPAP54920 295 aa14.57□□□□□ -0.08
PTCD1-201ENST00000292478 SMC1AQ14683 1233 aaKnown RBP14.57□□□□□ -0.08
PTCD1-201ENST00000292478 KRT24Q2M2I5 525 aa14.57□□□□□ -0.08
PTCD1-201ENST00000292478 CCDC186Q7Z3E2 898 aa14.57□□□□□ -0.08
PTCD1-201ENST00000292478 AOPEPQ8N6M6 819 aa14.57□□□□□ -0.08
PTCD1-201ENST00000292478 CALCOCO1Q9P1Z2 691 aa14.57□□□□□ -0.08
PTCD1-201ENST00000292478 BICDL2A1A5D9 508 aa14.57□□□□□ -0.08
PTCD1-201ENST00000292478 HOOK3Q86VS8 718 aa14.57□□□□□ -0.08
PTCD1-201ENST00000292478 PLVAPQ9BX97 442 aa14.57□□□□□ -0.08
PTCD1-201ENST00000292478 INCENPQ9NQS7 918 aa14.57□□□□□ -0.08
PTCD1-201ENST00000292478 ARHGEF5Q12774 1597 aa14.57□□□□□ -0.08
PTCD1-201ENST00000292478 ZNF622Q969S3 477 aaKnown RBP eCLIP14.57□□□□□ -0.082e-6■□□□□ 8.4
PTCD1-201ENST00000292478 DNAJC25Q9H1X3 360 aa14.57□□□□□ -0.08
PTCD1-201ENST00000292478 RRP36Q96EU6 259 aaKnown RBP14.56□□□□□ -0.08
PTCD1-201ENST00000292478 TRIM35Q9UPQ4 493 aa14.56□□□□□ -0.08
PTCD1-201ENST00000292478 NOP2P46087 812 aaKnown RBP14.56□□□□□ -0.08
PTCD1-201ENST00000292478 CBX1P83916 185 aa14.56□□□□□ -0.08
PTCD1-201ENST00000292478 PARP10Q53GL7 1025 aa14.56□□□□□ -0.08
PTCD1-201ENST00000292478 ERICH4A6NGS2 130 aa14.56□□□□□ -0.08
PTCD1-201ENST00000292478 EYA2O00167 538 aa14.56□□□□□ -0.08
PTCD1-201ENST00000292478 KCNA6P17658 529 aa14.56□□□□□ -0.08
PTCD1-201ENST00000292478 GNA11P29992 359 aa14.56□□□□□ -0.08
PTCD1-201ENST00000292478 APOBRQ0VD83 1088 aa14.56□□□□□ -0.08
PTCD1-201ENST00000292478 CCDC174Q6PII3 467 aa14.56□□□□□ -0.08
PTCD1-201ENST00000292478 JADE2Q9NQC1 790 aa14.56□□□□□ -0.08
PTCD1-201ENST00000292478 RNF123Q5XPI4 1314 aa14.56□□□□□ -0.08
PTCD1-201ENST00000292478 PTPRTO14522 1441 aa14.56□□□□□ -0.08
PTCD1-201ENST00000292478 RPS6KB1P23443 525 aa14.56□□□□□ -0.08
PTCD1-201ENST00000292478 PRPHP41219 470 aa14.56□□□□□ -0.08
PTCD1-201ENST00000292478 KRT83P78385 493 aa14.55□□□□□ -0.08
PTCD1-201ENST00000292478 ZNF790Q6PG37 636 aa14.55□□□□□ -0.08
PTCD1-201ENST00000292478 MAGEB6Q8N7X4 407 aa14.55□□□□□ -0.08
PTCD1-201ENST00000292478 TMEM87BQ96K49 555 aa14.55□□□□□ -0.08
PTCD1-201ENST00000292478 DENND2AQ9ULE3 1009 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms