RNA–Protein interactions for RNA: ENST00000290541.6

PSMB4-201, Transcript of proteasome subunit beta 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSMB4, Length 964 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB4-201ENST00000290541 SRCIN1Q9C0H9 1055 aa16.82■□□□□ 0.28
PSMB4-201ENST00000290541 NYXQ9GZU5 481 aa16.82■□□□□ 0.28
PSMB4-201ENST00000290541 IBTKQ9P2D0 1353 aaPredicted RBP16.81■□□□□ 0.28
PSMB4-201ENST00000290541 ALDH1L1O75891 902 aa16.81■□□□□ 0.28
PSMB4-201ENST00000290541 HCLS1P14317 486 aaPredicted RBP16.81■□□□□ 0.28
PSMB4-201ENST00000290541 TMEM57Q8N5G2 664 aa16.81■□□□□ 0.28
PSMB4-201ENST00000290541 ADM5C9JUS6 153 aa16.8■□□□□ 0.28
PSMB4-201ENST00000290541 H7C1W4 665 aa16.8■□□□□ 0.28
PSMB4-201ENST00000290541 FKTNO75072 461 aa16.8■□□□□ 0.28
PSMB4-201ENST00000290541 PCCAP05165 728 aaPredicted RBP16.8■□□□□ 0.28
PSMB4-201ENST00000290541 GTF2E1P29083 439 aaPredicted RBP16.8■□□□□ 0.28
PSMB4-201ENST00000290541 CASP7P55210 303 aa16.8■□□□□ 0.28
PSMB4-201ENST00000290541 KRT26Q7Z3Y9 468 aa16.8■□□□□ 0.28
PSMB4-201ENST00000290541 DZIP1LQ8IYY4 767 aaKnown RBP16.8■□□□□ 0.28
PSMB4-201ENST00000290541 ZBTB38Q8NAP3 1195 aaPredicted RBP16.8■□□□□ 0.28
PSMB4-201ENST00000290541 SH3TC1Q8TE82 1336 aa16.79■□□□□ 0.28
PSMB4-201ENST00000290541 SLC10A5Q5PT55 438 aa16.79■□□□□ 0.28
PSMB4-201ENST00000290541 UBE3BQ7Z3V4 1068 aa16.79■□□□□ 0.28
PSMB4-201ENST00000290541 CFHR5Q9BXR6 569 aa16.79■□□□□ 0.28
PSMB4-201ENST00000290541 DDX60Q8IY21 1712 aaKnown RBP16.79■□□□□ 0.28
PSMB4-201ENST00000290541 GRM8O00222 908 aa16.78■□□□□ 0.28
PSMB4-201ENST00000290541 IRS4O14654 1257 aaPredicted RBP16.78■□□□□ 0.28
PSMB4-201ENST00000290541 PPIP5K2O43314 1243 aa16.78■□□□□ 0.28
PSMB4-201ENST00000290541 NBPF7P0C2Y1 421 aaPredicted RBP16.78■□□□□ 0.28
PSMB4-201ENST00000290541 CCT4P50991 539 aaKnown RBP16.78■□□□□ 0.28
PSMB4-201ENST00000290541 RRP1P56182 461 aaKnown RBP16.78■□□□□ 0.28
PSMB4-201ENST00000290541 AOC3Q16853 763 aa16.78■□□□□ 0.28
PSMB4-201ENST00000290541 ARMC5Q96C12 935 aa16.78■□□□□ 0.28
PSMB4-201ENST00000290541 USP44Q9H0E7 712 aa16.78■□□□□ 0.28
PSMB4-201ENST00000290541 R3HDMLQ9H3Y0 253 aa16.78■□□□□ 0.28
PSMB4-201ENST00000290541 SOX1O00570 391 aaPredicted RBP16.77■□□□□ 0.28
PSMB4-201ENST00000290541 CRY2Q49AN0 593 aa16.77■□□□□ 0.28
PSMB4-201ENST00000290541 GRIPAP1Q4V328 841 aa16.77■□□□□ 0.28
PSMB4-201ENST00000290541 ZNRF3Q9ULT6 936 aa16.77■□□□□ 0.28
PSMB4-201ENST00000290541 SUPT16HQ9Y5B9 1047 aaKnown RBP16.77■□□□□ 0.28
PSMB4-201ENST00000290541 RIC1Q4ADV7 1423 aa16.77■□□□□ 0.27
PSMB4-201ENST00000290541 EPHA10Q5JZY3 1008 aa16.76■□□□□ 0.27
PSMB4-201ENST00000290541 OTOP1Q7RTM1 612 aa16.76■□□□□ 0.27
PSMB4-201ENST00000290541 FTSJ3Q8IY81 847 aaKnown RBP16.76■□□□□ 0.27
PSMB4-201ENST00000290541 MEIS3Q99687 375 aa16.76■□□□□ 0.27
PSMB4-201ENST00000290541 PRDM6Q9NQX0 595 aa16.76■□□□□ 0.27
PSMB4-201ENST00000290541 C9orf78Q9NZ63 289 aaPredicted RBP16.76■□□□□ 0.27
PSMB4-201ENST00000290541 CNOT7Q9UIV1 285 aaKnown RBP16.76■□□□□ 0.27
PSMB4-201ENST00000290541 TRIM17Q9Y577 477 aa16.76■□□□□ 0.27
PSMB4-201ENST00000290541 LAMB2P55268 1798 aa16.76■□□□□ 0.27
PSMB4-201ENST00000290541 MUC3AQ02505 3323 aa16.75■□□□□ 0.27
PSMB4-201ENST00000290541 UTYO14607 1347 aa16.75■□□□□ 0.27
PSMB4-201ENST00000290541 TM4SF4P48230 202 aa16.75■□□□□ 0.27
PSMB4-201ENST00000290541 KAZALD1Q96I82 304 aa16.75■□□□□ 0.27
PSMB4-201ENST00000290541 SUCLG2Q96I99 432 aa16.75■□□□□ 0.27
PSMB4-201ENST00000290541 EGFRP00533 1210 aa16.74■□□□□ 0.27
PSMB4-201ENST00000290541 MICALL2Q8IY33 904 aa16.74■□□□□ 0.27
PSMB4-201ENST00000290541 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.74■□□□□ 0.27
PSMB4-201ENST00000290541 LRCH3Q96II8 777 aa16.74■□□□□ 0.27
PSMB4-201ENST00000290541 CCDC85AQ96PX6 553 aaPredicted RBP16.74■□□□□ 0.27
PSMB4-201ENST00000290541 COG6Q9Y2V7 657 aa16.74■□□□□ 0.27
PSMB4-201ENST00000290541 FOXO4P98177 505 aa16.73■□□□□ 0.27
PSMB4-201ENST00000290541 SAMD7Q7Z3H4 446 aa16.73■□□□□ 0.27
PSMB4-201ENST00000290541 ITPRIPQ8IWB1 547 aa16.73■□□□□ 0.27
PSMB4-201ENST00000290541 NLRP3Q96P20 1036 aa16.73■□□□□ 0.27
PSMB4-201ENST00000290541 VPS33BQ9H267 617 aa16.73■□□□□ 0.27
PSMB4-201ENST00000290541 EYSQ5T1H1 3165 aa16.73■□□□□ 0.27
PSMB4-201ENST00000290541 PDE8AO60658 829 aa16.72■□□□□ 0.27
PSMB4-201ENST00000290541 PDE3AQ14432 1141 aa16.72■□□□□ 0.27
PSMB4-201ENST00000290541 PLA2G12BQ9BX93 195 aa16.72■□□□□ 0.27
PSMB4-201ENST00000290541 PTPN22Q9Y2R2 807 aa16.72■□□□□ 0.27
PSMB4-201ENST00000290541 COL4A1P02462 1669 aa16.72■□□□□ 0.27
PSMB4-201ENST00000290541 TAF1P21675 1872 aa16.71■□□□□ 0.27
PSMB4-201ENST00000290541 ZNF609O15014 1411 aa16.71■□□□□ 0.27
PSMB4-201ENST00000290541 H7C1D1 291 aa16.71■□□□□ 0.27
PSMB4-201ENST00000290541 ZBTB7BO15156 539 aaPredicted RBP16.71■□□□□ 0.27
PSMB4-201ENST00000290541 RAD17O75943 681 aa16.71■□□□□ 0.27
PSMB4-201ENST00000290541 MS4A1P11836 297 aa16.71■□□□□ 0.27
PSMB4-201ENST00000290541 MVPQ14764 893 aaKnown RBP16.71■□□□□ 0.27
PSMB4-201ENST00000290541 SF3B3Q15393 1217 aaKnown RBP16.71■□□□□ 0.27
PSMB4-201ENST00000290541 HOXA10P31260 410 aaPredicted RBP16.7■□□□□ 0.26
PSMB4-201ENST00000290541 CTSWP56202 376 aa16.7■□□□□ 0.26
PSMB4-201ENST00000290541 MPNDQ8N594 471 aa16.7■□□□□ 0.26
PSMB4-201ENST00000290541 ANKRD44Q8N8A2 993 aa16.7■□□□□ 0.26
PSMB4-201ENST00000290541 TTLL11Q8NHH1 800 aa16.7■□□□□ 0.26
PSMB4-201ENST00000290541 CDCA5Q96FF9 252 aa16.7■□□□□ 0.26
PSMB4-201ENST00000290541 BICC1Q9H694 974 aaKnown RBP16.7■□□□□ 0.26
PSMB4-201ENST00000290541 SEC31BQ9NQW1 1179 aa16.7■□□□□ 0.26
PSMB4-201ENST00000290541 STXBP5LQ9Y2K9 1186 aa16.7■□□□□ 0.26
PSMB4-201ENST00000290541 LRRFIP2Q9Y608 721 aaKnown RBP16.7■□□□□ 0.26
PSMB4-201ENST00000290541 LAMB1P07942 1786 aa16.69■□□□□ 0.26
PSMB4-201ENST00000290541 MYH3P11055 1940 aa16.69■□□□□ 0.26
PSMB4-201ENST00000290541 CSF1RP07333 972 aa16.69■□□□□ 0.26
PSMB4-201ENST00000290541 UBTFL1P0CB47 393 aaPredicted RBP16.69■□□□□ 0.26
PSMB4-201ENST00000290541 TNIP1Q15025 636 aa16.69■□□□□ 0.26
PSMB4-201ENST00000290541 TBC1D10BQ4KMP7 808 aaPredicted RBP16.69■□□□□ 0.26
PSMB4-201ENST00000290541 DCPSQ96C86 337 aaKnown RBP16.69■□□□□ 0.26
PSMB4-201ENST00000290541 ZNF333Q96JL9 665 aa16.69■□□□□ 0.26
PSMB4-201ENST00000290541 C1orf115Q9H7X2 142 aa16.69■□□□□ 0.26
PSMB4-201ENST00000290541 A0A1W2PPC1 479 aa16.68■□□□□ 0.26
PSMB4-201ENST00000290541 PPEF1O14829 653 aaPredicted RBP16.68■□□□□ 0.26
PSMB4-201ENST00000290541 FKBP1BP68106 108 aa16.68■□□□□ 0.26
PSMB4-201ENST00000290541 LMBR1LQ6UX01 489 aa16.68■□□□□ 0.26
PSMB4-201ENST00000290541 RPGRQ92834 1020 aaKnown RBP16.68■□□□□ 0.26
PSMB4-201ENST00000290541 CRBNQ96SW2 442 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms