RNA–Protein interactions for RNA: ENST00000288602.10

BRAF-201, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAF, Length 2,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-201ENST00000288602 MTMR6Q9Y217 621 aa22.94■■□□□ 1.26
BRAF-201ENST00000288602 DSCC1Q9BVC3 393 aa22.94■■□□□ 1.26
BRAF-201ENST00000288602 SEC31BQ9NQW1 1179 aa22.94■■□□□ 1.26
BRAF-201ENST00000288602 CAMTA2O94983 1202 aa22.93■■□□□ 1.26
BRAF-201ENST00000288602 SMIM5Q71RC9 77 aa22.93■■□□□ 1.26
BRAF-201ENST00000288602 PDE8BO95263 885 aa22.93■■□□□ 1.26
BRAF-201ENST00000288602 PTF1AQ7RTS3 328 aa22.93■■□□□ 1.26
BRAF-201ENST00000288602 NGLY1Q96IV0 654 aa22.93■■□□□ 1.26
BRAF-201ENST00000288602 ALDH8A1Q9H2A2 487 aaPredicted RBP22.93■■□□□ 1.26
BRAF-201ENST00000288602 HSP90B1P14625 803 aaKnown RBP22.92■■□□□ 1.26
BRAF-201ENST00000288602 PUS7LQ9H0K6 701 aaKnown RBP22.92■■□□□ 1.26
BRAF-201ENST00000288602 SYCE3A1L190 88 aa22.92■■□□□ 1.26
BRAF-201ENST00000288602 ZNF445P59923 1031 aa22.92■■□□□ 1.26
BRAF-201ENST00000288602 LARP1BQ659C4 914 aaKnown RBP22.92■■□□□ 1.26
BRAF-201ENST00000288602 CHST3Q7LGC8 479 aa22.92■■□□□ 1.26
BRAF-201ENST00000288602 BRF1Q92994 677 aa22.92■■□□□ 1.26
BRAF-201ENST00000288602 NIP7Q9Y221 180 aaKnown RBP eCLIP22.92■■□□□ 1.26
BRAF-201ENST00000288602 UTP14AQ9BVJ6 771 aaKnown RBP22.91■■□□□ 1.26
BRAF-201ENST00000288602 FGD1P98174 961 aa22.91■■□□□ 1.26
BRAF-201ENST00000288602 UBAP1LF5GYI3 381 aa22.9■■□□□ 1.26
BRAF-201ENST00000288602 FOXP2O15409 715 aa22.9■■□□□ 1.26
BRAF-201ENST00000288602 FIBPO43427 364 aa22.9■■□□□ 1.26
BRAF-201ENST00000288602 PHKA1P46020 1223 aa22.9■■□□□ 1.26
BRAF-201ENST00000288602 DNM1Q05193 864 aaKnown RBP22.9■■□□□ 1.26
BRAF-201ENST00000288602 FERMT3Q86UX7 667 aa22.9■■□□□ 1.26
BRAF-201ENST00000288602 E7EWF7 191 aa22.9■■□□□ 1.26
BRAF-201ENST00000288602 HAND2P61296 217 aa22.9■■□□□ 1.26
BRAF-201ENST00000288602 JAK2O60674 1132 aa22.89■■□□□ 1.26
BRAF-201ENST00000288602 MBD3O95983 291 aa22.89■■□□□ 1.26
BRAF-201ENST00000288602 CDC37L1Q7L3B6 337 aa22.89■■□□□ 1.26
BRAF-201ENST00000288602 LAMA4Q16363 1823 aa22.89■■□□□ 1.26
BRAF-201ENST00000288602 SPEF2Q9C093 1822 aa22.89■■□□□ 1.26
BRAF-201ENST00000288602 CCDC102BQ68D86 513 aa22.89■■□□□ 1.25
BRAF-201ENST00000288602 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.89■■□□□ 1.25
BRAF-201ENST00000288602 FAM182BQ5T319 152 aa22.88■■□□□ 1.25
BRAF-201ENST00000288602 FAM173BQ6P4H8 233 aa22.88■■□□□ 1.25
BRAF-201ENST00000288602 DHX32Q7L7V1 743 aaKnown RBP22.88■■□□□ 1.25
BRAF-201ENST00000288602 NWD2Q9ULI1 1742 aa22.88■■□□□ 1.25
BRAF-201ENST00000288602 AKAP11Q9UKA4 1901 aa22.87■■□□□ 1.25
BRAF-201ENST00000288602 LINC00116Q8NCU8 138 aa22.87■■□□□ 1.25
BRAF-201ENST00000288602 GTF3C6Q969F1 213 aa22.87■■□□□ 1.25
BRAF-201ENST00000288602 PIH1D3Q9NQM4 214 aaKnown RBP22.87■■□□□ 1.25
BRAF-201ENST00000288602 NASPP49321 788 aaPredicted RBP22.87■■□□□ 1.25
BRAF-201ENST00000288602 APOBRQ0VD83 1088 aa22.87■■□□□ 1.25
BRAF-201ENST00000288602 MPHOSPH8Q99549 860 aa22.87■■□□□ 1.25
BRAF-201ENST00000288602 RBSNQ9H1K0 784 aa22.87■■□□□ 1.25
BRAF-201ENST00000288602 IDH1O75874 414 aaKnown RBP22.86■■□□□ 1.25
BRAF-201ENST00000288602 NTSR2O95665 410 aa22.86■■□□□ 1.25
BRAF-201ENST00000288602 APPBP2Q92624 585 aa22.86■■□□□ 1.25
BRAF-201ENST00000288602 MYO5AQ9Y4I1 1855 aaKnown RBP22.86■■□□□ 1.25
BRAF-201ENST00000288602 PPFIA3O75145 1194 aa22.86■■□□□ 1.25
BRAF-201ENST00000288602 FGAP02671 866 aa22.86■■□□□ 1.25
BRAF-201ENST00000288602 ZFYP08048 801 aaPredicted RBP22.86■■□□□ 1.25
BRAF-201ENST00000288602 SCRN1Q12765 414 aa22.86■■□□□ 1.25
BRAF-201ENST00000288602 LRRFIP1Q32MZ4 808 aaKnown RBP22.86■■□□□ 1.25
BRAF-201ENST00000288602 SLC9C2Q5TAH2 1124 aa22.86■■□□□ 1.25
BRAF-201ENST00000288602 DDX11Q96FC9 970 aa22.86■■□□□ 1.25
BRAF-201ENST00000288602 GPAA1O43292 621 aa22.85■■□□□ 1.25
BRAF-201ENST00000288602 PUM3Q15397 648 aaKnown RBP22.85■■□□□ 1.25
BRAF-201ENST00000288602 TICAM2Q86XR7 235 aa22.85■■□□□ 1.25
BRAF-201ENST00000288602 NAP1L2Q9ULW6 460 aaPredicted RBP22.85■■□□□ 1.25
BRAF-201ENST00000288602 BCL9LQ86UU0 1499 aa22.85■■□□□ 1.25
BRAF-201ENST00000288602 EXOSC10Q01780 885 aaKnown RBP22.85■■□□□ 1.25
BRAF-201ENST00000288602 SMARCC1Q92922 1105 aaPredicted RBP22.85■■□□□ 1.25
BRAF-201ENST00000288602 ATP6V1DQ9Y5K8 247 aa22.85■■□□□ 1.25
BRAF-201ENST00000288602 MROH5Q6ZUA9 1318 aa22.84■■□□□ 1.25
BRAF-201ENST00000288602 PARP10Q53GL7 1025 aa22.84■■□□□ 1.25
BRAF-201ENST00000288602 LPIN2Q92539 896 aa22.84■■□□□ 1.25
BRAF-201ENST00000288602 HMGB1P09429 215 aaKnown RBP22.84■■□□□ 1.25
BRAF-201ENST00000288602 FGFR2P21802 821 aa22.84■■□□□ 1.25
BRAF-201ENST00000288602 CCT2P78371 535 aaKnown RBP22.84■■□□□ 1.25
BRAF-201ENST00000288602 BICDL1Q6ZP65 573 aa22.84■■□□□ 1.25
BRAF-201ENST00000288602 TMEM87AQ8NBN3 555 aa22.84■■□□□ 1.25
BRAF-201ENST00000288602 GPHNQ9NQX3 736 aaPredicted RBP22.83■■□□□ 1.25
BRAF-201ENST00000288602 LRSAM1Q6UWE0 723 aa22.83■■□□□ 1.24
BRAF-201ENST00000288602 AK7Q96M32 723 aa22.83■■□□□ 1.24
BRAF-201ENST00000288602 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.83■■□□□ 1.24
BRAF-201ENST00000288602 ABCC12Q96J65 1359 aa22.82■■□□□ 1.24
BRAF-201ENST00000288602 ADD2P35612 726 aa22.82■■□□□ 1.24
BRAF-201ENST00000288602 CCDC152Q4G0S7 254 aa22.82■■□□□ 1.24
BRAF-201ENST00000288602 WWC3Q9ULE0 1092 aa22.82■■□□□ 1.24
BRAF-201ENST00000288602 MYH7P12883 1935 aa22.82■■□□□ 1.24
BRAF-201ENST00000288602 VPS72Q15906 364 aa22.82■■□□□ 1.24
BRAF-201ENST00000288602 NCOA5Q9HCD5 579 aaKnown RBP22.82■■□□□ 1.24
BRAF-201ENST00000288602 DDX60Q8IY21 1712 aaKnown RBP22.82■■□□□ 1.24
BRAF-201ENST00000288602 ARID4AP29374 1257 aaPredicted RBP22.81■■□□□ 1.24
BRAF-201ENST00000288602 FOSBP53539 338 aa22.81■■□□□ 1.24
BRAF-201ENST00000288602 ZNF512BQ96KM6 892 aaPredicted RBP22.81■■□□□ 1.24
BRAF-201ENST00000288602 ZNF532Q9HCE3 1301 aa22.81■■□□□ 1.24
BRAF-201ENST00000288602 RREB1Q92766 1687 aa22.81■■□□□ 1.24
BRAF-201ENST00000288602 PDCP20941 246 aa22.81■■□□□ 1.24
BRAF-201ENST00000288602 IMMTQ16891 758 aaKnown RBP22.81■■□□□ 1.24
BRAF-201ENST00000288602 C3orf67Q6ZVT6 689 aa22.81■■□□□ 1.24
BRAF-201ENST00000288602 COL4A1P02462 1669 aa22.8■■□□□ 1.24
BRAF-201ENST00000288602 ERFEQ4G0M1 354 aa22.8■■□□□ 1.24
BRAF-201ENST00000288602 SLC5A1P13866 664 aa22.8■■□□□ 1.24
BRAF-201ENST00000288602 BCAMP50895 628 aa22.8■■□□□ 1.24
BRAF-201ENST00000288602 RASGRF1Q13972 1273 aa22.8■■□□□ 1.24
BRAF-201ENST00000288602 WTIPA6NIX2 430 aaPredicted RBP22.79■■□□□ 1.24
BRAF-201ENST00000288602 IGHMBP2P38935 993 aaKnown RBP22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms