RNA–Protein interactions for RNA: ENST00000288462.4

C9orf43-201, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-201ENST00000288462 TAF6LQ9Y6J9 622 aa12.19□□□□□ -0.46
C9orf43-201ENST00000288462 CPA1P15085 419 aa12.19□□□□□ -0.46
C9orf43-201ENST00000288462 AMIGO3Q86WK7 504 aa12.19□□□□□ -0.46
C9orf43-201ENST00000288462 MPHOSPH8Q99549 860 aa12.19□□□□□ -0.46
C9orf43-201ENST00000288462 ALDH8A1Q9H2A2 487 aaPredicted RBP12.19□□□□□ -0.46
C9orf43-201ENST00000288462 PDRG1Q9NUG6 133 aa12.19□□□□□ -0.46
C9orf43-201ENST00000288462 RTCBQ9Y3I0 505 aaKnown RBP12.19□□□□□ -0.46
C9orf43-201ENST00000288462 UQCRFS1P1P0C7P4 283 aa12.18□□□□□ -0.46
C9orf43-201ENST00000288462 SLC5A1P13866 664 aa12.18□□□□□ -0.46
C9orf43-201ENST00000288462 IGHMBP2P38935 993 aaKnown RBP12.18□□□□□ -0.46
C9orf43-201ENST00000288462 PKP1Q13835 747 aa12.18□□□□□ -0.46
C9orf43-201ENST00000288462 KRT32Q14532 448 aa12.18□□□□□ -0.46
C9orf43-201ENST00000288462 SLFNL1Q499Z3 407 aa12.18□□□□□ -0.46
C9orf43-201ENST00000288462 PI16Q6UXB8 463 aa12.18□□□□□ -0.46
C9orf43-201ENST00000288462 SMIM5Q71RC9 77 aa12.18□□□□□ -0.46
C9orf43-201ENST00000288462 NYXQ9GZU5 481 aa12.18□□□□□ -0.46
C9orf43-201ENST00000288462 QTRT2Q9H974 415 aaKnown RBP12.18□□□□□ -0.46
C9orf43-201ENST00000288462 SRP68Q9UHB9 627 aaKnown RBP12.18□□□□□ -0.46
C9orf43-201ENST00000288462 M0R2C6 588 aa12.17□□□□□ -0.46
C9orf43-201ENST00000288462 PHKA1P46020 1223 aa12.17□□□□□ -0.46
C9orf43-201ENST00000288462 CCDC102BQ68D86 513 aa12.17□□□□□ -0.46
C9orf43-201ENST00000288462 C3orf67Q6ZVT6 689 aa12.17□□□□□ -0.46
C9orf43-201ENST00000288462 CDC5LQ99459 802 aaKnown RBP12.17□□□□□ -0.46
C9orf43-201ENST00000288462 ZPR1O75312 459 aa12.17□□□□□ -0.46
C9orf43-201ENST00000288462 RPS6KB1P23443 525 aa12.17□□□□□ -0.46
C9orf43-201ENST00000288462 GSE1Q14687 1217 aa12.17□□□□□ -0.46
C9orf43-201ENST00000288462 BLOC1S2Q6QNY1 142 aa12.17□□□□□ -0.46
C9orf43-201ENST00000288462 HELBQ8NG08 1087 aaPredicted RBP12.17□□□□□ -0.46
C9orf43-201ENST00000288462 OSBP2Q969R2 916 aa12.17□□□□□ -0.46
C9orf43-201ENST00000288462 ZSCAN31Q96LW9 406 aaPredicted RBP12.17□□□□□ -0.46
C9orf43-201ENST00000288462 ZDHHC9Q9Y397 364 aa12.17□□□□□ -0.46
C9orf43-201ENST00000288462 CYP21A2P08686 494 aa12.16□□□□□ -0.46
C9orf43-201ENST00000288462 PTMSP20962 102 aa12.16□□□□□ -0.46
C9orf43-201ENST00000288462 COL9A3Q14050 684 aaPredicted RBP12.16□□□□□ -0.46
C9orf43-201ENST00000288462 TTF1Q15361 905 aaPredicted RBP12.16□□□□□ -0.46
C9orf43-201ENST00000288462 APPBP2Q92624 585 aa12.16□□□□□ -0.46
C9orf43-201ENST00000288462 ARHGEF1Q92888 912 aaKnown RBP12.16□□□□□ -0.46
C9orf43-201ENST00000288462 SH2B1Q9NRF2 756 aaPredicted RBP12.16□□□□□ -0.46
C9orf43-201ENST00000288462 BAG4O95429 457 aaKnown RBP12.16□□□□□ -0.46
C9orf43-201ENST00000288462 LARGE1O95461 756 aa12.16□□□□□ -0.46
C9orf43-201ENST00000288462 HSPD1P10809 573 aaKnown RBP12.16□□□□□ -0.46
C9orf43-201ENST00000288462 BICDL1Q6ZP65 573 aa12.16□□□□□ -0.46
C9orf43-201ENST00000288462 SETDB2Q96T68 719 aa12.16□□□□□ -0.46
C9orf43-201ENST00000288462 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.16□□□□□ -0.46
C9orf43-201ENST00000288462 BRD1O95696 1058 aa12.15□□□□□ -0.46
C9orf43-201ENST00000288462 ADRA2BP18089 450 aa12.15□□□□□ -0.46
C9orf43-201ENST00000288462 CHRNDQ07001 517 aa12.15□□□□□ -0.46
C9orf43-201ENST00000288462 FAM196AQ6ZSG2 479 aa12.15□□□□□ -0.46
C9orf43-201ENST00000288462 PIH1D3Q9NQM4 214 aaKnown RBP12.15□□□□□ -0.46
C9orf43-201ENST00000288462 LRRC4BQ9NT99 713 aa12.15□□□□□ -0.46
C9orf43-201ENST00000288462 FOXP2O15409 715 aa12.14□□□□□ -0.47
C9orf43-201ENST00000288462 ADD2P35612 726 aa12.14□□□□□ -0.47
C9orf43-201ENST00000288462 ST3GAL1Q11201 340 aa12.14□□□□□ -0.47
C9orf43-201ENST00000288462 ANKRD1Q15327 319 aa12.14□□□□□ -0.47
C9orf43-201ENST00000288462 ZSCAN25Q6NSZ9 544 aa12.14□□□□□ -0.47
C9orf43-201ENST00000288462 ANKRD18AQ8IVF6 992 aa12.14□□□□□ -0.47
C9orf43-201ENST00000288462 CARMIL3Q8ND23 1372 aa12.14□□□□□ -0.47
C9orf43-201ENST00000288462 TRAK2O60296 914 aa12.14□□□□□ -0.47
C9orf43-201ENST00000288462 RASGRF1Q13972 1273 aa12.14□□□□□ -0.47
C9orf43-201ENST00000288462 TOB2Q14106 344 aaPredicted RBP12.14□□□□□ -0.47
C9orf43-201ENST00000288462 STOX1Q6ZVD7 989 aa12.14□□□□□ -0.47
C9orf43-201ENST00000288462 KRT27Q7Z3Y8 459 aa12.14□□□□□ -0.47
C9orf43-201ENST00000288462 NBPF5PQ86XG9 351 aaPredicted RBP12.14□□□□□ -0.47
C9orf43-201ENST00000288462 BSDC1Q9NW68 430 aaPredicted RBP12.14□□□□□ -0.47
C9orf43-201ENST00000288462 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.14□□□□□ -0.47
C9orf43-201ENST00000288462 MYH13Q9UKX3 1938 aa12.14□□□□□ -0.47
C9orf43-201ENST00000288462 ZNF804BA4D1E1 1349 aa12.14□□□□□ -0.47
C9orf43-201ENST00000288462 UBE3CQ15386 1083 aa12.13□□□□□ -0.47
C9orf43-201ENST00000288462 ME3Q16798 604 aa12.13□□□□□ -0.47
C9orf43-201ENST00000288462 WASHC4Q2M389 1173 aa12.13□□□□□ -0.47
C9orf43-201ENST00000288462 SLC27A3Q5K4L6 730 aa12.13□□□□□ -0.47
C9orf43-201ENST00000288462 TRAPPC3LQ5T215 181 aa12.13□□□□□ -0.47
C9orf43-201ENST00000288462 SPATA5Q8NB90 893 aa12.13□□□□□ -0.47
C9orf43-201ENST00000288462 NEK1Q96PY6 1258 aa12.13□□□□□ -0.47
C9orf43-201ENST00000288462 TPCN1Q9ULQ1 816 aa12.13□□□□□ -0.47
C9orf43-201ENST00000288462 SNAP23O00161 211 aa12.13□□□□□ -0.47
C9orf43-201ENST00000288462 RFC4P35249 363 aa12.13□□□□□ -0.47
C9orf43-201ENST00000288462 LARP6Q9BRS8 491 aaKnown RBP12.13□□□□□ -0.47
C9orf43-201ENST00000288462 PUS7LQ9H0K6 701 aaKnown RBP12.13□□□□□ -0.47
C9orf43-201ENST00000288462 TCRBV5S4A2TA0A5A2 114 aa12.12□□□□□ -0.47
C9orf43-201ENST00000288462 GOLGA6L22H0YM25 854 aa12.12□□□□□ -0.47
C9orf43-201ENST00000288462 HMGB1P09429 215 aaKnown RBP12.12□□□□□ -0.47
C9orf43-201ENST00000288462 PDE6AP16499 860 aa12.12□□□□□ -0.47
C9orf43-201ENST00000288462 GTF2E1P29083 439 aaPredicted RBP12.12□□□□□ -0.47
C9orf43-201ENST00000288462 TPTE2Q6XPS3 522 aa12.12□□□□□ -0.47
C9orf43-201ENST00000288462 TIAM2Q8IVF5 1701 aa12.12□□□□□ -0.47
C9orf43-201ENST00000288462 COL1A1P02452 1464 aaPredicted RBP12.12□□□□□ -0.47
C9orf43-201ENST00000288462 MAST2Q6P0Q8 1798 aa12.12□□□□□ -0.47
C9orf43-201ENST00000288462 GPAA1O43292 621 aa12.11□□□□□ -0.47
C9orf43-201ENST00000288462 PHF14O94880 888 aa12.11□□□□□ -0.47
C9orf43-201ENST00000288462 UBE4AQ14139 1066 aa12.11□□□□□ -0.47
C9orf43-201ENST00000288462 SLC9C2Q5TAH2 1124 aa12.11□□□□□ -0.47
C9orf43-201ENST00000288462 CCDC83Q8IWF9 413 aa12.11□□□□□ -0.47
C9orf43-201ENST00000288462 CELF1Q92879 486 aaKnown RBP12.11□□□□□ -0.47
C9orf43-201ENST00000288462 TCEANC2Q96MN5 208 aa12.11□□□□□ -0.47
C9orf43-201ENST00000288462 NLRP3Q96P20 1036 aa12.11□□□□□ -0.47
C9orf43-201ENST00000288462 CHD4Q14839 1912 aa12.11□□□□□ -0.47
C9orf43-201ENST00000288462 SKOR2Q2VWA4 1001 aaPredicted RBP12.11□□□□□ -0.47
C9orf43-201ENST00000288462 CTNNA3Q9UI47 895 aa12.11□□□□□ -0.47
C9orf43-201ENST00000288462 WWC3Q9ULE0 1092 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms