RNA–Protein interactions for RNA: ENST00000288447.8

DMD-201, Transcript of dystrophin, humanhuman

TSL 1 (best) BASIC

Gene DMD, Length 3,856 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-201ENST00000288447 ODR4Q5SWX8 454 aa3.9□□□□□ -1.78
DMD-201ENST00000288447 PPP1R18Q6NYC8 613 aa3.9□□□□□ -1.78
DMD-201ENST00000288447 RUFY3Q7L099 469 aa3.9□□□□□ -1.78
DMD-201ENST00000288447 TMC4Q7Z404 712 aa3.9□□□□□ -1.78
DMD-201ENST00000288447 SPATS2Q86XZ4 545 aaKnown RBP3.9□□□□□ -1.78
DMD-201ENST00000288447 NKAPQ8N5F7 415 aaKnown RBP3.9□□□□□ -1.78
DMD-201ENST00000288447 FBXO22Q8NEZ5 403 aa3.9□□□□□ -1.78
DMD-201ENST00000288447 RASGRP4Q8TDF6 673 aa3.9□□□□□ -1.78
DMD-201ENST00000288447 C17orf50Q8WW18 174 aa3.9□□□□□ -1.78
DMD-201ENST00000288447 THAP11Q96EK4 314 aa3.9□□□□□ -1.78
DMD-201ENST00000288447 NELL2Q99435 816 aa3.9□□□□□ -1.78
DMD-201ENST00000288447 AIPL1Q9NZN9 384 aa3.9□□□□□ -1.78
DMD-201ENST00000288447 STK26Q9P289 416 aa3.9□□□□□ -1.78
DMD-201ENST00000288447 ZNF112Q9UJU3 913 aa3.9□□□□□ -1.78
DMD-201ENST00000288447 GTF2A1LQ9UNN4 478 aa3.9□□□□□ -1.78
DMD-201ENST00000288447 KCNH4Q9UQ05 1017 aa3.9□□□□□ -1.78
DMD-201ENST00000288447 F5H0A9 414 aaPredicted RBP3.9□□□□□ -1.79
DMD-201ENST00000288447 CPLX1O14810 134 aa3.9□□□□□ -1.79
DMD-201ENST00000288447 COL6A2P12110 1019 aa3.9□□□□□ -1.79
DMD-201ENST00000288447 BPIFB3P59826 476 aa3.9□□□□□ -1.79
DMD-201ENST00000288447 PDE3BQ13370 1112 aa3.9□□□□□ -1.79
DMD-201ENST00000288447 LAMC2Q13753 1193 aa3.9□□□□□ -1.79
DMD-201ENST00000288447 TATDN1Q6P1N9 297 aa3.9□□□□□ -1.79
DMD-201ENST00000288447 C1orf122Q6ZSJ8 110 aa3.9□□□□□ -1.79
DMD-201ENST00000288447 NEK9Q8TD19 979 aa3.9□□□□□ -1.79
DMD-201ENST00000288447 RMDN2Q96LZ7 410 aa3.9□□□□□ -1.79
DMD-201ENST00000288447 HERPUD2Q9BSE4 406 aa3.9□□□□□ -1.79
DMD-201ENST00000288447 XPO4Q9C0E2 1151 aaKnown RBP3.9□□□□□ -1.79
DMD-201ENST00000288447 CD248Q9HCU0 757 aa3.9□□□□□ -1.79
DMD-201ENST00000288447 TMEM260Q9NX78 707 aa3.9□□□□□ -1.79
DMD-201ENST00000288447 USP25Q9UHP3 1055 aa3.9□□□□□ -1.79
DMD-201ENST00000288447 ZNF232Q9UNY5 417 aa3.9□□□□□ -1.79
DMD-201ENST00000288447 PHKG2P15735 406 aa3.9□□□□□ -1.79
DMD-201ENST00000288447 CAPN2P17655 700 aa3.9□□□□□ -1.79
DMD-201ENST00000288447 GABREP78334 506 aa3.9□□□□□ -1.79
DMD-201ENST00000288447 TBX2Q13207 712 aaPredicted RBP3.9□□□□□ -1.79
DMD-201ENST00000288447 LAPTM5Q13571 262 aa3.9□□□□□ -1.79
DMD-201ENST00000288447 USP48Q86UV5 1035 aa3.9□□□□□ -1.79
DMD-201ENST00000288447 KIAA0825Q8IV33 1275 aa3.9□□□□□ -1.79
DMD-201ENST00000288447 GIMAP8Q8ND71 665 aaPredicted RBP3.9□□□□□ -1.79
DMD-201ENST00000288447 PPHLN1Q8NEY8 458 aaKnown RBP3.9□□□□□ -1.79
DMD-201ENST00000288447 MFRPQ9BY79 579 aa3.9□□□□□ -1.79
DMD-201ENST00000288447 MRPL9Q9BYD2 267 aaKnown RBP3.9□□□□□ -1.79
DMD-201ENST00000288447 TMX4Q9H1E5 349 aaPredicted RBP3.9□□□□□ -1.79
DMD-201ENST00000288447 EPB41L4AQ9HCS5 686 aaPredicted RBP3.9□□□□□ -1.79
DMD-201ENST00000288447 ARHGAP28Q9P2N2 729 aa3.9□□□□□ -1.79
DMD-201ENST00000288447 MAFBQ9Y5Q3 323 aaPredicted RBP3.9□□□□□ -1.79
DMD-201ENST00000288447 MRPL42Q9Y6G3 142 aaKnown RBP3.9□□□□□ -1.79
DMD-201ENST00000288447 IKBKGQ9Y6K9 419 aa3.9□□□□□ -1.79
DMD-201ENST00000288447 POTECB2RU33 542 aa3.89□□□□□ -1.79
DMD-201ENST00000288447 M0QX08 132 aa3.89□□□□□ -1.79
DMD-201ENST00000288447 SGTAO43765 313 aa3.89□□□□□ -1.79
DMD-201ENST00000288447 APBB3O95704 486 aa3.89□□□□□ -1.79
DMD-201ENST00000288447 KRT1P04264 644 aa3.89□□□□□ -1.79
DMD-201ENST00000288447 UBA7P41226 1012 aa3.89□□□□□ -1.79
DMD-201ENST00000288447 CCDC15Q0P6D6 951 aa3.89□□□□□ -1.79
DMD-201ENST00000288447 CBLBQ13191 982 aa3.89□□□□□ -1.79
DMD-201ENST00000288447 EIF4A2Q14240 407 aaKnown RBP3.89□□□□□ -1.79
DMD-201ENST00000288447 MYBPC3Q14896 1274 aa3.89□□□□□ -1.79
DMD-201ENST00000288447 RASSF3Q86WH2 238 aa3.89□□□□□ -1.79
DMD-201ENST00000288447 SYNPOQ8N3V7 929 aa3.89□□□□□ -1.79
DMD-201ENST00000288447 CHCHD4Q8N4Q1 142 aa3.89□□□□□ -1.79
DMD-201ENST00000288447 SPATA18Q8TC71 538 aa3.89□□□□□ -1.79
DMD-201ENST00000288447 REPIN1Q9BWE0 567 aaKnown RBP3.89□□□□□ -1.79
DMD-201ENST00000288447 MAK16Q9BXY0 300 aaKnown RBP3.89□□□□□ -1.79
DMD-201ENST00000288447 EFR3BQ9Y2G0 817 aa3.89□□□□□ -1.79
DMD-201ENST00000288447 CCDC61Q9Y6R9 512 aa3.89□□□□□ -1.79
DMD-201ENST00000288447 PPP1R3GB7ZBB8 358 aa3.89□□□□□ -1.79
DMD-201ENST00000288447 BOLA2-SMG1P6H3BVE0 249 aa3.89□□□□□ -1.79
DMD-201ENST00000288447 TRIM27P14373 513 aa3.89□□□□□ -1.79
DMD-201ENST00000288447 PTGER2P43116 358 aa3.89□□□□□ -1.79
DMD-201ENST00000288447 MASP1P48740 699 aa3.89□□□□□ -1.79
DMD-201ENST00000288447 USP11P51784 963 aa3.89□□□□□ -1.79
DMD-201ENST00000288447 ZNF131P52739 623 aa3.89□□□□□ -1.79
DMD-201ENST00000288447 CYB5RLQ6IPT4 315 aa3.89□□□□□ -1.79
DMD-201ENST00000288447 IGF2-ASQ6U949 168 aa3.89□□□□□ -1.79
DMD-201ENST00000288447 PIP4P2Q8N4L2 257 aa3.89□□□□□ -1.79
DMD-201ENST00000288447 ZBTB8BQ8NAP8 495 aaPredicted RBP3.89□□□□□ -1.79
DMD-201ENST00000288447 MRFAP1L1Q96HT8 127 aa3.89□□□□□ -1.79
DMD-201ENST00000288447 TSGA13Q96PP4 275 aa3.89□□□□□ -1.79
DMD-201ENST00000288447 ZSWIM4Q9H7M6 989 aa3.89□□□□□ -1.79
DMD-201ENST00000288447 KCNQ5Q9NR82 932 aa3.89□□□□□ -1.79
DMD-201ENST00000288447 CLIP2Q9UDT6 1046 aa3.89□□□□□ -1.79
DMD-201ENST00000288447 NPHP1O15259 732 aa3.89□□□□□ -1.79
DMD-201ENST00000288447 RNF113AO15541 343 aaKnown RBP3.89□□□□□ -1.79
DMD-201ENST00000288447 RPS6KB1P23443 525 aa3.89□□□□□ -1.79
DMD-201ENST00000288447 ADD2P35612 726 aa3.89□□□□□ -1.79
DMD-201ENST00000288447 SARNPP82979 210 aaKnown RBP3.89□□□□□ -1.79
DMD-201ENST00000288447 DAB2P98082 770 aa3.89□□□□□ -1.79
DMD-201ENST00000288447 SEPT2Q15019 361 aa3.89□□□□□ -1.79
DMD-201ENST00000288447 BRDTQ58F21 947 aaPredicted RBP3.89□□□□□ -1.79
DMD-201ENST00000288447 CCDC122Q5T0U0 273 aa3.89□□□□□ -1.79
DMD-201ENST00000288447 FCRLBQ6BAA4 426 aa3.89□□□□□ -1.79
DMD-201ENST00000288447 ACRBPQ8NEB7 543 aa3.89□□□□□ -1.79
DMD-201ENST00000288447 TDRD7Q8NHU6 1098 aaKnown RBP3.89□□□□□ -1.79
DMD-201ENST00000288447 ARGLU1Q9NWB6 273 aaPredicted RBP3.89□□□□□ -1.79
DMD-201ENST00000288447 PSD3Q9NYI0 1048 aa3.89□□□□□ -1.79
DMD-201ENST00000288447 LUZP4Q9P127 313 aa3.89□□□□□ -1.79
DMD-201ENST00000288447 CTNNA3Q9UI47 895 aa3.89□□□□□ -1.79
DMD-201ENST00000288447 DDX10Q13206 875 aaKnown RBP3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms