RNA–Protein interactions for RNA: ENST00000282841.9

GGPS1-201, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 2,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-201ENST00000282841 PIH1D3Q9NQM4 214 aaKnown RBP13.22□□□□□ -0.29
GGPS1-201ENST00000282841 CNBD1Q8NA66 436 aa13.21□□□□□ -0.29
GGPS1-201ENST00000282841 M0R2C6 588 aa13.21□□□□□ -0.3
GGPS1-201ENST00000282841 CASTP20810 708 aaKnown RBP13.21□□□□□ -0.3
GGPS1-201ENST00000282841 DDR1Q08345 913 aa13.21□□□□□ -0.3
GGPS1-201ENST00000282841 PRR5LQ6MZQ0 368 aa13.21□□□□□ -0.3
GGPS1-201ENST00000282841 COL23A1Q86Y22 540 aaPredicted RBP13.21□□□□□ -0.3
GGPS1-201ENST00000282841 OSBP2Q969R2 916 aa13.21□□□□□ -0.3
GGPS1-201ENST00000282841 SNX21Q969T3 373 aa13.21□□□□□ -0.3
GGPS1-201ENST00000282841 JAKMIP1Q96N16 626 aaKnown RBP13.21□□□□□ -0.3
GGPS1-201ENST00000282841 MINPP1Q9UNW1 487 aa13.21□□□□□ -0.3
GGPS1-201ENST00000282841 RASGRF1Q13972 1273 aa13.2□□□□□ -0.3
GGPS1-201ENST00000282841 LPIN2Q92539 896 aa13.2□□□□□ -0.3
GGPS1-201ENST00000282841 BCORQ6W2J9 1755 aa13.2□□□□□ -0.3
GGPS1-201ENST00000282841 MROH5Q6ZUA9 1318 aa13.2□□□□□ -0.3
GGPS1-201ENST00000282841 SERPINB2P05120 415 aa13.2□□□□□ -0.3
GGPS1-201ENST00000282841 FGFR2P21802 821 aa13.2□□□□□ -0.3
GGPS1-201ENST00000282841 NFKBIBQ15653 356 aa13.2□□□□□ -0.3
GGPS1-201ENST00000282841 SLC27A3Q5K4L6 730 aa13.2□□□□□ -0.3
GGPS1-201ENST00000282841 FOXD4L5Q5VV16 416 aaPredicted RBP13.2□□□□□ -0.3
GGPS1-201ENST00000282841 CREB3L3Q68CJ9 461 aa13.2□□□□□ -0.3
GGPS1-201ENST00000282841 FOXD4L4Q8WXT5 416 aaPredicted RBP13.2□□□□□ -0.3
GGPS1-201ENST00000282841 CDC5LQ99459 802 aaKnown RBP13.2□□□□□ -0.3
GGPS1-201ENST00000282841 PUS7LQ9H0K6 701 aaKnown RBP13.2□□□□□ -0.3
GGPS1-201ENST00000282841 HMG20BQ9P0W2 317 aa13.2□□□□□ -0.3
GGPS1-201ENST00000282841 CARMIL3Q8ND23 1372 aa13.2□□□□□ -0.3
GGPS1-201ENST00000282841 RPS8P62241 208 aaKnown RBP13.19□□□□□ -0.3
GGPS1-201ENST00000282841 SF3B3Q15393 1217 aaKnown RBP13.19□□□□□ -0.3
GGPS1-201ENST00000282841 EZH2Q15910 746 aaKnown RBP13.19□□□□□ -0.3
GGPS1-201ENST00000282841 TTLL5Q6EMB2 1281 aa13.19□□□□□ -0.3
GGPS1-201ENST00000282841 PDGFDQ9GZP0 370 aaPredicted RBP13.19□□□□□ -0.3
GGPS1-201ENST00000282841 NYXQ9GZU5 481 aa13.19□□□□□ -0.3
GGPS1-201ENST00000282841 FBXO3Q9UK99 471 aa13.19□□□□□ -0.3
GGPS1-201ENST00000282841 ST18O60284 1047 aa13.19□□□□□ -0.3
GGPS1-201ENST00000282841 TM4SF1P30408 202 aa13.19□□□□□ -0.3
GGPS1-201ENST00000282841 MCMDC2Q4G0Z9 681 aa13.19□□□□□ -0.3
GGPS1-201ENST00000282841 WWC3Q9ULE0 1092 aa13.19□□□□□ -0.3
GGPS1-201ENST00000282841 C4AP0C0L4 1744 aa13.19□□□□□ -0.3
GGPS1-201ENST00000282841 SLC5A1P13866 664 aa13.18□□□□□ -0.3
GGPS1-201ENST00000282841 PKP1Q13835 747 aa13.18□□□□□ -0.3
GGPS1-201ENST00000282841 NECTIN1Q15223 517 aa13.18□□□□□ -0.3
GGPS1-201ENST00000282841 SLC9C2Q5TAH2 1124 aa13.18□□□□□ -0.3
GGPS1-201ENST00000282841 DEFB132Q7Z7B7 95 aa13.18□□□□□ -0.3
GGPS1-201ENST00000282841 TXNRD3Q86VQ6 643 aa13.18□□□□□ -0.3
GGPS1-201ENST00000282841 MAP4K1Q92918 833 aa13.18□□□□□ -0.3
GGPS1-201ENST00000282841 MAST3O60307 1309 aa13.18□□□□□ -0.3
GGPS1-201ENST00000282841 CICQ96RK0 1608 aaPredicted RBP13.18□□□□□ -0.3
GGPS1-201ENST00000282841 SLC27A2O14975 620 aa13.18□□□□□ -0.3
GGPS1-201ENST00000282841 RNF113AO15541 343 aaKnown RBP13.18□□□□□ -0.3
GGPS1-201ENST00000282841 OLFM4Q6UX06 510 aa13.18□□□□□ -0.3
GGPS1-201ENST00000282841 HIP1O00291 1037 aa13.18□□□□□ -0.3
GGPS1-201ENST00000282841 HAND2P61296 217 aa13.18□□□□□ -0.3
GGPS1-201ENST00000282841 SLC10A5Q5PT55 438 aa13.18□□□□□ -0.3
GGPS1-201ENST00000282841 CHAMP1Q96JM3 812 aa13.18□□□□□ -0.3
GGPS1-201ENST00000282841 LRRC2Q9BYS8 371 aa13.18□□□□□ -0.3
GGPS1-201ENST00000282841 ABCF2Q9UG63 623 aa13.18□□□□□ -0.3
GGPS1-201ENST00000282841 MED23Q9ULK4 1368 aa13.18□□□□□ -0.3
GGPS1-201ENST00000282841 MYO5AQ9Y4I1 1855 aaKnown RBP13.17□□□□□ -0.3
GGPS1-201ENST00000282841 SCN7AQ01118 1682 aa13.17□□□□□ -0.3
GGPS1-201ENST00000282841 TMX3Q96JJ7 454 aa13.17□□□□□ -0.3
GGPS1-201ENST00000282841 PAXIP1Q6ZW49 1069 aaPredicted RBP13.17□□□□□ -0.3
GGPS1-201ENST00000282841 STK11IPQ8N1F8 1099 aa13.17□□□□□ -0.3
GGPS1-201ENST00000282841 SPATA5Q8NB90 893 aa13.17□□□□□ -0.3
GGPS1-201ENST00000282841 BSDC1Q9NW68 430 aaPredicted RBP13.17□□□□□ -0.3
GGPS1-201ENST00000282841 ZNF831Q5JPB2 1677 aa13.17□□□□□ -0.3
GGPS1-201ENST00000282841 SSFA2P28290 1259 aa13.16□□□□□ -0.3
GGPS1-201ENST00000282841 AK2P54819 239 aa13.16□□□□□ -0.3
GGPS1-201ENST00000282841 ZMYM1Q5SVZ6 1142 aa13.16□□□□□ -0.3
GGPS1-201ENST00000282841 CHST3Q7LGC8 479 aa13.16□□□□□ -0.3
GGPS1-201ENST00000282841 LARGE1O95461 756 aa13.16□□□□□ -0.3
GGPS1-201ENST00000282841 HSP90B1P14625 803 aaKnown RBP13.16□□□□□ -0.3
GGPS1-201ENST00000282841 VPS37DQ86XT2 251 aa13.16□□□□□ -0.3
GGPS1-201ENST00000282841 ANKIB1Q9P2G1 1089 aa13.16□□□□□ -0.3
GGPS1-201ENST00000282841 UBR3Q6ZT12 1888 aa13.16□□□□□ -0.3
GGPS1-201ENST00000282841 CYP21A2P08686 494 aa13.15□□□□□ -0.3
GGPS1-201ENST00000282841 TNRC6CQ9HCJ0 1690 aaKnown RBP13.15□□□□□ -0.3
GGPS1-201ENST00000282841 HSPD1P10809 573 aaKnown RBP13.15□□□□□ -0.3
GGPS1-201ENST00000282841 MAGEB6Q8N7X4 407 aa13.15□□□□□ -0.3
GGPS1-201ENST00000282841 MIGA1Q8NAN2 632 aa13.15□□□□□ -0.3
GGPS1-201ENST00000282841 ZNF532Q9HCE3 1301 aa13.15□□□□□ -0.3
GGPS1-201ENST00000282841 POLRMTO00411 1230 aaKnown RBP13.14□□□□□ -0.31
GGPS1-201ENST00000282841 PPFIA3O75145 1194 aa13.14□□□□□ -0.31
GGPS1-201ENST00000282841 CHAF1AQ13111 956 aaPredicted RBP13.14□□□□□ -0.31
GGPS1-201ENST00000282841 FOXD4L6Q3SYB3 417 aaPredicted RBP13.14□□□□□ -0.31
GGPS1-201ENST00000282841 FOXD4L3Q6VB84 417 aaPredicted RBP13.14□□□□□ -0.31
GGPS1-201ENST00000282841 AKT1S1Q96B36 256 aa13.14□□□□□ -0.31
GGPS1-201ENST00000282841 PLSCR1O15162 318 aa13.14□□□□□ -0.31
GGPS1-201ENST00000282841 FOXP2O15409 715 aa13.14□□□□□ -0.31
GGPS1-201ENST00000282841 MMP10P09238 476 aa13.14□□□□□ -0.31
GGPS1-201ENST00000282841 ZKSCAN1P17029 563 aaPredicted RBP13.14□□□□□ -0.31
GGPS1-201ENST00000282841 ADRA2BP18089 450 aa13.14□□□□□ -0.31
GGPS1-201ENST00000282841 ANAPC15P60006 121 aa13.14□□□□□ -0.31
GGPS1-201ENST00000282841 RUFY3Q7L099 469 aa13.14□□□□□ -0.31
GGPS1-201ENST00000282841 RPGRQ92834 1020 aaKnown RBP13.14□□□□□ -0.31
GGPS1-201ENST00000282841 ZNF219Q9P2Y4 722 aaPredicted RBP13.14□□□□□ -0.31
GGPS1-201ENST00000282841 NSFL1CQ9UNZ2 370 aaKnown RBP13.14□□□□□ -0.31
GGPS1-201ENST00000282841 AKAP11Q9UKA4 1901 aa13.14□□□□□ -0.31
GGPS1-201ENST00000282841 APPP05067 770 aa13.14□□□□□ -0.31
GGPS1-201ENST00000282841 STOX1Q6ZVD7 989 aa13.14□□□□□ -0.31
GGPS1-201ENST00000282841 DHX37Q8IY37 1157 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms