RNA–Protein interactions for RNA: ENST00000281142.9

SCLT1-201, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SCLT1, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-201ENST00000281142 TOB2Q14106 344 aaPredicted RBP13.35□□□□□ -0.27
SCLT1-201ENST00000281142 FTOQ9C0B1 505 aaKnown RBP eCLIP13.35□□□□□ -0.273e-8■□□□□ 9.8
SCLT1-201ENST00000281142 ECHDC1Q9NTX5 307 aa13.35□□□□□ -0.27
SCLT1-201ENST00000281142 BTAF1O14981 1849 aa13.35□□□□□ -0.27
SCLT1-201ENST00000281142 RBM43Q6ZSC3 357 aaKnown RBP13.35□□□□□ -0.27
SCLT1-201ENST00000281142 CLASRPQ8N2M8 674 aaKnown RBP13.35□□□□□ -0.27
SCLT1-201ENST00000281142 CCDC8Q9H0W5 538 aaPredicted RBP13.35□□□□□ -0.27
SCLT1-201ENST00000281142 TLR7Q9NYK1 1049 aaKnown RBP13.35□□□□□ -0.27
SCLT1-201ENST00000281142 PXDNLA1KZ92 1463 aa13.34□□□□□ -0.27
SCLT1-201ENST00000281142 N4BP2Q86UW6 1770 aaPredicted RBP13.34□□□□□ -0.27
SCLT1-201ENST00000281142 GABPB1Q06547 395 aaPredicted RBP13.34□□□□□ -0.27
SCLT1-201ENST00000281142 FILIP1Q7Z7B0 1213 aa13.34□□□□□ -0.27
SCLT1-201ENST00000281142 AACSQ86V21 672 aa13.34□□□□□ -0.27
SCLT1-201ENST00000281142 LRRC8AQ8IWT6 810 aa13.34□□□□□ -0.27
SCLT1-201ENST00000281142 BABAM1Q9NWV8 329 aa13.34□□□□□ -0.27
SCLT1-201ENST00000281142 TTC41PQ6P2S7 1318 aa13.34□□□□□ -0.27
SCLT1-201ENST00000281142 PPFIA3O75145 1194 aa13.34□□□□□ -0.27
SCLT1-201ENST00000281142 ELF2Q15723 593 aa13.34□□□□□ -0.27
SCLT1-201ENST00000281142 ZNF790Q6PG37 636 aa13.34□□□□□ -0.27
SCLT1-201ENST00000281142 DNAAF4Q8WXU2 420 aa13.34□□□□□ -0.27
SCLT1-201ENST00000281142 DDX19AQ9NUU7 478 aaKnown RBP13.34□□□□□ -0.27
SCLT1-201ENST00000281142 USP42Q9H9J4 1324 aaKnown RBP13.34□□□□□ -0.27
SCLT1-201ENST00000281142 CHGBP05060 677 aa13.33□□□□□ -0.27
SCLT1-201ENST00000281142 IFIT2P09913 472 aaKnown RBP13.33□□□□□ -0.27
SCLT1-201ENST00000281142 SYCP1Q15431 976 aa13.33□□□□□ -0.27
SCLT1-201ENST00000281142 MAP4K1Q92918 833 aa13.33□□□□□ -0.27
SCLT1-201ENST00000281142 EDC3Q96F86 508 aaKnown RBP13.33□□□□□ -0.27
SCLT1-201ENST00000281142 SCAND2PQ9GZW5 306 aaPredicted RBP13.33□□□□□ -0.27
SCLT1-201ENST00000281142 PAXBP1Q9Y5B6 917 aa13.33□□□□□ -0.27
SCLT1-201ENST00000281142 MORC2Q9Y6X9 1032 aaPredicted RBP13.33□□□□□ -0.27
SCLT1-201ENST00000281142 IQCB1Q15051 598 aa13.33□□□□□ -0.28
SCLT1-201ENST00000281142 FBXO38Q6PIJ6 1188 aa13.33□□□□□ -0.28
SCLT1-201ENST00000281142 BLOC1S2Q6QNY1 142 aa13.33□□□□□ -0.28
SCLT1-201ENST00000281142 ZNF589Q86UQ0 364 aaPredicted RBP13.33□□□□□ -0.28
SCLT1-201ENST00000281142 ASAP1Q9ULH1 1129 aa13.33□□□□□ -0.28
SCLT1-201ENST00000281142 CACNA1FO60840 1977 aa13.33□□□□□ -0.28
SCLT1-201ENST00000281142 KCPQ6ZWJ8 1503 aa13.33□□□□□ -0.28
SCLT1-201ENST00000281142 C5P01031 1676 aa13.33□□□□□ -0.28
SCLT1-201ENST00000281142 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.33□□□□□ -0.28
SCLT1-201ENST00000281142 BOLA2Q9H3K6 86 aa13.33□□□□□ -0.28
SCLT1-201ENST00000281142 ADCY9O60503 1353 aa13.32□□□□□ -0.28
SCLT1-201ENST00000281142 SKILP12757 684 aa13.32□□□□□ -0.28
SCLT1-201ENST00000281142 EIF4A1P60842 406 aaKnown RBP13.32□□□□□ -0.28
SCLT1-201ENST00000281142 LRRN4CLQ8ND94 238 aa13.32□□□□□ -0.28
SCLT1-201ENST00000281142 BRF1Q92994 677 aa13.32□□□□□ -0.28
SCLT1-201ENST00000281142 FAM196AQ6ZSG2 479 aa13.32□□□□□ -0.28
SCLT1-201ENST00000281142 LRRC2Q9BYS8 371 aa13.32□□□□□ -0.28
SCLT1-201ENST00000281142 ATG3Q9NT62 314 aa13.32□□□□□ -0.28
SCLT1-201ENST00000281142 ERICH4A6NGS2 130 aa13.31□□□□□ -0.28
SCLT1-201ENST00000281142 RPS6KB1P23443 525 aa13.31□□□□□ -0.28
SCLT1-201ENST00000281142 CWF19L2Q2TBE0 894 aaKnown RBP13.31□□□□□ -0.28
SCLT1-201ENST00000281142 EAF2Q96CJ1 260 aaPredicted RBP13.31□□□□□ -0.28
SCLT1-201ENST00000281142 EVI5LQ96CN4 794 aa13.31□□□□□ -0.28
SCLT1-201ENST00000281142 CCDC69A6NI79 296 aa13.31□□□□□ -0.28
SCLT1-201ENST00000281142 PDCP20941 246 aa13.31□□□□□ -0.28
SCLT1-201ENST00000281142 RESTQ13127 1097 aa13.31□□□□□ -0.28
SCLT1-201ENST00000281142 TERF2Q15554 542 aa13.31□□□□□ -0.28
SCLT1-201ENST00000281142 NDUFB9Q9Y6M9 179 aa13.31□□□□□ -0.28
SCLT1-201ENST00000281142 CCZ1BP86790 482 aa13.31□□□□□ -0.28
SCLT1-201ENST00000281142 CCZ1P86791 482 aaPredicted RBP13.31□□□□□ -0.28
SCLT1-201ENST00000281142 PTPN14Q15678 1187 aa13.31□□□□□ -0.28
SCLT1-201ENST00000281142 TAF7LQ5H9L4 462 aa13.31□□□□□ -0.28
SCLT1-201ENST00000281142 NYAP1Q6ZVC0 841 aa13.31□□□□□ -0.28
SCLT1-201ENST00000281142 KLHDC4Q8TBB5 520 aa13.31□□□□□ -0.28
SCLT1-201ENST00000281142 ZNF496Q96IT1 587 aaPredicted RBP13.31□□□□□ -0.28
SCLT1-201ENST00000281142 SIL1Q9H173 461 aa13.31□□□□□ -0.28
SCLT1-201ENST00000281142 GOLPH3LQ9H4A5 285 aa13.31□□□□□ -0.28
SCLT1-201ENST00000281142 PRAMEF22A3QJZ6 481 aa13.3□□□□□ -0.28
SCLT1-201ENST00000281142 GOLGA6L19H0YKK7 550 aa13.3□□□□□ -0.28
SCLT1-201ENST00000281142 SASH1O94885 1247 aa13.3□□□□□ -0.28
SCLT1-201ENST00000281142 TTC5Q8N0Z6 440 aa13.3□□□□□ -0.28
SCLT1-201ENST00000281142 HEG1Q9ULI3 1381 aa13.3□□□□□ -0.28
SCLT1-201ENST00000281142 PROSER3Q2NL68 480 aa13.3□□□□□ -0.28
SCLT1-201ENST00000281142 HSP90AB4PQ58FF6 505 aa13.3□□□□□ -0.28
SCLT1-201ENST00000281142 KLHL34Q8N239 644 aa13.3□□□□□ -0.28
SCLT1-201ENST00000281142 ZNF397Q8NF99 534 aaPredicted RBP13.3□□□□□ -0.28
SCLT1-201ENST00000281142 FSD1Q9BTV5 496 aa13.3□□□□□ -0.28
SCLT1-201ENST00000281142 ZNF446Q9NWS9 450 aa13.3□□□□□ -0.28
SCLT1-201ENST00000281142 PTCD1O75127 700 aaKnown RBP13.29□□□□□ -0.28
SCLT1-201ENST00000281142 KRT222Q8N1A0 295 aa13.29□□□□□ -0.28
SCLT1-201ENST00000281142 TRIM37O94972 964 aa13.29□□□□□ -0.28
SCLT1-201ENST00000281142 C9orf78Q9NZ63 289 aaPredicted RBP13.29□□□□□ -0.28
SCLT1-201ENST00000281142 PSMA5P28066 241 aa13.28□□□□□ -0.28
SCLT1-201ENST00000281142 TNS1Q9HBL0 1735 aaKnown RBP13.28□□□□□ -0.28
SCLT1-201ENST00000281142 CCDC129Q6ZRS4 1044 aa13.28□□□□□ -0.28
SCLT1-201ENST00000281142 DHX40Q8IX18 779 aaKnown RBP13.28□□□□□ -0.28
SCLT1-201ENST00000281142 MAP3K2Q9Y2U5 619 aa13.28□□□□□ -0.28
SCLT1-201ENST00000281142 COL15A1P39059 1388 aa13.28□□□□□ -0.28
SCLT1-201ENST00000281142 LAMB4A4D0S4 1761 aa13.28□□□□□ -0.28
SCLT1-201ENST00000281142 GIGYF1O75420 1035 aaPredicted RBP13.28□□□□□ -0.28
SCLT1-201ENST00000281142 CDC25BP30305 580 aa13.28□□□□□ -0.28
SCLT1-201ENST00000281142 CCAR1Q8IX12 1150 aaKnown RBP13.28□□□□□ -0.28
SCLT1-201ENST00000281142 CCAR2Q8N163 923 aaKnown RBP13.28□□□□□ -0.28
SCLT1-201ENST00000281142 GPATCH3Q96I76 525 aa13.28□□□□□ -0.28
SCLT1-201ENST00000281142 LY75O60449 1722 aa13.28□□□□□ -0.28
SCLT1-201ENST00000281142 TJP1Q07157 1748 aa13.27□□□□□ -0.28
SCLT1-201ENST00000281142 H3BQV1 296 aa13.27□□□□□ -0.28
SCLT1-201ENST00000281142 IFFO2Q5TF58 517 aa13.27□□□□□ -0.28
SCLT1-201ENST00000281142 FMNL2Q96PY5 1086 aa13.27□□□□□ -0.28
SCLT1-201ENST00000281142 SLC4A9Q96Q91 983 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms