RNA–Protein interactions for RNA: ENST00000278947.5

SCN2B-201, Transcript of sodium voltage-gated channel beta subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN2B, Length 5,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2B-201ENST00000278947 C8orf58Q8NAV2 365 aa15.16■□□□□ 0.02
SCN2B-201ENST00000278947 ATP2C2O75185 946 aa15.16■□□□□ 0.02
SCN2B-201ENST00000278947 NIM1KQ8IY84 436 aa15.16■□□□□ 0.02
SCN2B-201ENST00000278947 GOPCQ9HD26 462 aa15.16■□□□□ 0.02
SCN2B-201ENST00000278947 PPM1EQ8WY54 764 aa15.16■□□□□ 0.02
SCN2B-201ENST00000278947 TSG101Q99816 390 aa15.16■□□□□ 0.02
SCN2B-201ENST00000278947 SPA17Q15506 151 aa15.15■□□□□ 0.02
SCN2B-201ENST00000278947 SRRTQ9BXP5 876 aaKnown RBP15.15■□□□□ 0.02
SCN2B-201ENST00000278947 TTC6Q86TZ1 520 aa15.15■□□□□ 0.02
SCN2B-201ENST00000278947 CARD14Q9BXL6 1004 aa15.15■□□□□ 0.02
SCN2B-201ENST00000278947 SHROOM2Q13796 1616 aa15.15■□□□□ 0.02
SCN2B-201ENST00000278947 CCDC150Q8NCX0 1101 aa15.15■□□□□ 0.02
SCN2B-201ENST00000278947 PYM1Q9BRP8 204 aaKnown RBP15.15■□□□□ 0.02
SCN2B-201ENST00000278947 METTL22Q9BUU2 404 aaPredicted RBP15.15■□□□□ 0.02
SCN2B-201ENST00000278947 SPECC1Q5M775 1068 aa15.15■□□□□ 0.02
SCN2B-201ENST00000278947 STXBP4Q6ZWJ1 553 aa15.15■□□□□ 0.02
SCN2B-201ENST00000278947 KRT27Q7Z3Y8 459 aa15.15■□□□□ 0.02
SCN2B-201ENST00000278947 NEMFO60524 1076 aa15.14■□□□□ 0.01
SCN2B-201ENST00000278947 PAXBP1Q9Y5B6 917 aa15.14■□□□□ 0.01
SCN2B-201ENST00000278947 ZNF397Q8NF99 534 aaPredicted RBP15.14■□□□□ 0.01
SCN2B-201ENST00000278947 CARD10Q9BWT7 1032 aa15.14■□□□□ 0.01
SCN2B-201ENST00000278947 TOP1P11387 765 aaKnown RBP15.14■□□□□ 0.01
SCN2B-201ENST00000278947 SSR1P43307 286 aaKnown RBP15.14■□□□□ 0.01
SCN2B-201ENST00000278947 CEP135Q66GS9 1140 aa15.14■□□□□ 0.01
SCN2B-201ENST00000278947 WTAPQ15007 396 aa15.14■□□□□ 0.01
SCN2B-201ENST00000278947 CCDC94Q9BW85 323 aaPredicted RBP15.14■□□□□ 0.01
SCN2B-201ENST00000278947 THRAP3Q9Y2W1 955 aaKnown RBP15.14■□□□□ 0.01
SCN2B-201ENST00000278947 DAAM2Q86T65 1068 aa15.13■□□□□ 0.01
SCN2B-201ENST00000278947 STX8Q9UNK0 236 aa15.13■□□□□ 0.01
SCN2B-201ENST00000278947 IARSP41252 1262 aaKnown RBP15.13■□□□□ 0.01
SCN2B-201ENST00000278947 CEP57Q86XR8 500 aa15.13■□□□□ 0.01
SCN2B-201ENST00000278947 LRRC27Q9C0I9 530 aa15.13■□□□□ 0.01
SCN2B-201ENST00000278947 PICK1Q9NRD5 415 aa15.13■□□□□ 0.01
SCN2B-201ENST00000278947 FGFR1OPO95684 399 aaKnown RBP15.13■□□□□ 0.01
SCN2B-201ENST00000278947 DPY19L2Q6NUT2 758 aa15.13■□□□□ 0.01
SCN2B-201ENST00000278947 NLGN1Q8N2Q7 840 aa15.13■□□□□ 0.01
SCN2B-201ENST00000278947 RTL1A6NKG5 1358 aa15.13■□□□□ 0.01
SCN2B-201ENST00000278947 ANO10Q9NW15 660 aa15.13■□□□□ 0.01
SCN2B-201ENST00000278947 RBM27Q9P2N5 1060 aaKnown RBP15.13■□□□□ 0.01
SCN2B-201ENST00000278947 GCC2Q8IWJ2 1684 aa15.13■□□□□ 0.01
SCN2B-201ENST00000278947 ZNF335Q9H4Z2 1342 aaPredicted RBP15.12■□□□□ 0.01
SCN2B-201ENST00000278947 ADCY5O95622 1261 aa15.12■□□□□ 0.01
SCN2B-201ENST00000278947 HIBADHP31937 336 aaKnown RBP15.12■□□□□ 0.01
SCN2B-201ENST00000278947 SNW1Q13573 536 aaKnown RBP15.12■□□□□ 0.01
SCN2B-201ENST00000278947 SLC9C2Q5TAH2 1124 aa15.12■□□□□ 0.01
SCN2B-201ENST00000278947 ANKRD44Q8N8A2 993 aa15.12■□□□□ 0.01
SCN2B-201ENST00000278947 CPSF2Q9P2I0 782 aaKnown RBP15.12■□□□□ 0.01
SCN2B-201ENST00000278947 IQSEC3Q9UPP2 1182 aaPredicted RBP15.12■□□□□ 0.01
SCN2B-201ENST00000278947 TTC41PQ6P2S7 1318 aa15.12■□□□□ 0.01
SCN2B-201ENST00000278947 CALM1P0DP23 149 aa15.12■□□□□ 0.01
SCN2B-201ENST00000278947 CALM2P0DP24 149 aa15.12■□□□□ 0.01
SCN2B-201ENST00000278947 CALM3P0DP25 149 aa15.12■□□□□ 0.01
SCN2B-201ENST00000278947 PAFAH1B1P43034 410 aa15.12■□□□□ 0.01
SCN2B-201ENST00000278947 IFIT1BQ5T764 474 aaKnown RBP15.12■□□□□ 0.01
SCN2B-201ENST00000278947 METAP2P50579 478 aaKnown RBP eCLIP15.12■□□□□ 0.01
SCN2B-201ENST00000278947 UNC5CLQ8IV45 518 aa15.12■□□□□ 0.01
SCN2B-201ENST00000278947 CALML4Q96GE6 196 aa15.12■□□□□ 0.01
SCN2B-201ENST00000278947 MEIS3Q99687 375 aa15.12■□□□□ 0.01
SCN2B-201ENST00000278947 C6orf163Q5TEZ5 329 aa15.12■□□□□ 0.01
SCN2B-201ENST00000278947 NEK1Q96PY6 1258 aa15.12■□□□□ 0.01
SCN2B-201ENST00000278947 VAT1LQ9HCJ6 419 aa15.12■□□□□ 0.01
SCN2B-201ENST00000278947 PAG1Q9NWQ8 432 aa15.12■□□□□ 0.01
SCN2B-201ENST00000278947 MCMDC2Q4G0Z9 681 aa15.12■□□□□ 0.01
SCN2B-201ENST00000278947 FBF1Q8TES7 1133 aa15.12■□□□□ 0.01
SCN2B-201ENST00000278947 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.12■□□□□ 0.01
SCN2B-201ENST00000278947 TMOD4Q9NZQ9 345 aa15.12■□□□□ 0.01
SCN2B-201ENST00000278947 PUM3Q15397 648 aaKnown RBP15.11■□□□□ 0.01
SCN2B-201ENST00000278947 CCDC83Q8IWF9 413 aa15.11■□□□□ 0.01
SCN2B-201ENST00000278947 WWC3Q9ULE0 1092 aa15.11■□□□□ 0.01
SCN2B-201ENST00000278947 SEPT6Q14141 434 aa15.11■□□□□ 0.01
SCN2B-201ENST00000278947 MAATS1Q7Z4T9 603 aa15.11■□□□□ 0.01
SCN2B-201ENST00000278947 ERMNQ8TAM6 284 aa15.11■□□□□ 0.01
SCN2B-201ENST00000278947 WDR66Q8TBY9 1149 aa15.11■□□□□ 0.01
SCN2B-201ENST00000278947 SARNPP82979 210 aaKnown RBP15.11■□□□□ 0.01
SCN2B-201ENST00000278947 AMPD3Q01432 767 aa15.11■□□□□ 0.01
SCN2B-201ENST00000278947 C10orf67Q8IYJ2 551 aa15.11■□□□□ 0.01
SCN2B-201ENST00000278947 VTI1AQ96AJ9 217 aa15.11■□□□□ 0.01
SCN2B-201ENST00000278947 FAM135BQ49AJ0 1406 aa15.11■□□□□ 0.01
SCN2B-201ENST00000278947 A2ML1A8K2U0 1454 aa15.11■□□□□ 0.01
SCN2B-201ENST00000278947 CCDC160A6NGH7 325 aa15.11■□□□□ 0.01
SCN2B-201ENST00000278947 DNAJC10Q8IXB1 793 aa15.11■□□□□ 0.01
SCN2B-201ENST00000278947 RASSF4Q9H2L5 321 aa15.11■□□□□ 0.01
SCN2B-201ENST00000278947 TCP11L1Q9NUJ3 509 aa15.11■□□□□ 0.01
SCN2B-201ENST00000278947 LIMCH1Q9UPQ0 1083 aa15.11■□□□□ 0.01
SCN2B-201ENST00000278947 RTL9Q8NET4 1388 aa15.11■□□□□ 0.01
SCN2B-201ENST00000278947 MYOM2P54296 1465 aa15.11■□□□□ 0.01
SCN2B-201ENST00000278947 GSTTP1A0A1W2PQM5 241 aa15.1■□□□□ 0.01
SCN2B-201ENST00000278947 CCDC6Q16204 474 aa15.1■□□□□ 0.01
SCN2B-201ENST00000278947 ITGA6P23229 1130 aa15.1■□□□□ 0.01
SCN2B-201ENST00000278947 MSL1Q68DK7 614 aa15.1■□□□□ 0.01
SCN2B-201ENST00000278947 INSRP06213 1382 aa15.1■□□□□ 0.01
SCN2B-201ENST00000278947 METP08581 1390 aa15.1■□□□□ 0.01
SCN2B-201ENST00000278947 HLTFQ14527 1009 aaKnown RBP eCLIP15.1■□□□□ 0.01
SCN2B-201ENST00000278947 CNKSR1Q969H4 720 aa15.1■□□□□ 0.01
SCN2B-201ENST00000278947 USP16Q9Y5T5 823 aa15.1■□□□□ 0.01
SCN2B-201ENST00000278947 IGSF3O75054 1194 aa15.1■□□□□ 0.01
SCN2B-201ENST00000278947 PHKG2P15735 406 aa15.1■□□□□ 0.01
SCN2B-201ENST00000278947 HDAC1Q13547 482 aaPredicted RBP15.1■□□□□ 0.01
SCN2B-201ENST00000278947 TTC22Q5TAA0 569 aa15.1■□□□□ 0.01
SCN2B-201ENST00000278947 H7C1D1 291 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms