RNA–Protein interactions for RNA: ENST00000276241.10

CT55-201, Transcript of cancer/testis antigen 55, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CT55, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CT55-201ENST00000276241 COA1Q9GZY4 146 aa17.05■□□□□ 0.32
CT55-201ENST00000276241 LRRFIP2Q9Y608 721 aaKnown RBP17.05■□□□□ 0.32
CT55-201ENST00000276241 H7C1D1 291 aa17.04■□□□□ 0.32
CT55-201ENST00000276241 RPS12P25398 132 aaKnown RBP17.04■□□□□ 0.32
CT55-201ENST00000276241 LRRC24Q50LG9 513 aa17.04■□□□□ 0.32
CT55-201ENST00000276241 INTS3Q68E01 1043 aaKnown RBP17.04■□□□□ 0.32
CT55-201ENST00000276241 USP17L3A6NCW0 530 aa17.04■□□□□ 0.32
CT55-201ENST00000276241 USP17L4A6NCW7 530 aa17.04■□□□□ 0.32
CT55-201ENST00000276241 VIL1P09327 827 aaKnown RBP17.04■□□□□ 0.32
CT55-201ENST00000276241 RSBN1LQ6PCB5 846 aaPredicted RBP17.04■□□□□ 0.32
CT55-201ENST00000276241 USP17L1Q7RTZ2 530 aa17.04■□□□□ 0.32
CT55-201ENST00000276241 SAMD7Q7Z3H4 446 aa17.04■□□□□ 0.32
CT55-201ENST00000276241 CNTROBQ8N137 903 aa17.04■□□□□ 0.32
CT55-201ENST00000276241 DPF2Q92785 391 aa17.04■□□□□ 0.32
CT55-201ENST00000276241 ZNF646O15015 1829 aaPredicted RBP17.03■□□□□ 0.32
CT55-201ENST00000276241 MROH5Q6ZUA9 1318 aa17.03■□□□□ 0.32
CT55-201ENST00000276241 TBC1D10BQ4KMP7 808 aaPredicted RBP17.03■□□□□ 0.32
CT55-201ENST00000276241 METTL24Q5JXM2 366 aa17.03■□□□□ 0.32
CT55-201ENST00000276241 RBM26Q5T8P6 1007 aaKnown RBP17.03■□□□□ 0.32
CT55-201ENST00000276241 FTSJ3Q8IY81 847 aaKnown RBP17.03■□□□□ 0.32
CT55-201ENST00000276241 MXD3Q9BW11 206 aa17.03■□□□□ 0.32
CT55-201ENST00000276241 PASKQ96RG2 1323 aa17.02■□□□□ 0.32
CT55-201ENST00000276241 IRS2Q9Y4H2 1338 aa17.02■□□□□ 0.32
CT55-201ENST00000276241 EGFRP00533 1210 aa17.02■□□□□ 0.31
CT55-201ENST00000276241 ZNF804AQ7Z570 1209 aa17.02■□□□□ 0.31
CT55-201ENST00000276241 TMEM57Q8N5G2 664 aa17.02■□□□□ 0.31
CT55-201ENST00000276241 ZNF609O15014 1411 aa17.01■□□□□ 0.31
CT55-201ENST00000276241 ITGBL1O95965 494 aaPredicted RBP17.01■□□□□ 0.31
CT55-201ENST00000276241 GNAI3P08754 354 aa17.01■□□□□ 0.31
CT55-201ENST00000276241 HIRAP54198 1017 aaPredicted RBP17.01■□□□□ 0.31
CT55-201ENST00000276241 KIF4BQ2VIQ3 1234 aa17.01■□□□□ 0.31
CT55-201ENST00000276241 AGBL3Q8NEM8 1001 aa17.01■□□□□ 0.31
CT55-201ENST00000276241 SIL1Q9H173 461 aa17.01■□□□□ 0.31
CT55-201ENST00000276241 CD209Q9NNX6 404 aa17.01■□□□□ 0.31
CT55-201ENST00000276241 HDAC5Q9UQL6 1122 aa17.01■□□□□ 0.31
CT55-201ENST00000276241 RIPOR2Q9Y4F9 1068 aa17.01■□□□□ 0.31
CT55-201ENST00000276241 RFX5P48382 616 aaPredicted RBP17■□□□□ 0.31
CT55-201ENST00000276241 GTF2IP78347 998 aa16.99■□□□□ 0.31
CT55-201ENST00000276241 PTPN12Q05209 780 aaKnown RBP16.99■□□□□ 0.31
CT55-201ENST00000276241 FMR1Q06787 632 aaKnown RBP eCLIP16.99■□□□□ 0.31
CT55-201ENST00000276241 UBE4AQ14139 1066 aa16.99■□□□□ 0.31
CT55-201ENST00000276241 DACT2Q5SW24 774 aa16.99■□□□□ 0.31
CT55-201ENST00000276241 TTLL5Q6EMB2 1281 aa16.99■□□□□ 0.31
CT55-201ENST00000276241 C15orf52Q6ZUT6 534 aaKnown RBP16.99■□□□□ 0.31
CT55-201ENST00000276241 ITPRIPQ8IWB1 547 aa16.99■□□□□ 0.31
CT55-201ENST00000276241 EYA2O00167 538 aa16.98■□□□□ 0.31
CT55-201ENST00000276241 TRAF5O00463 557 aa16.98■□□□□ 0.31
CT55-201ENST00000276241 GYG1P46976 350 aa16.98■□□□□ 0.31
CT55-201ENST00000276241 STRIP1Q5VSL9 837 aa16.98■□□□□ 0.31
CT55-201ENST00000276241 DZIP1LQ8IYY4 767 aaKnown RBP16.98■□□□□ 0.31
CT55-201ENST00000276241 GLIS2Q9BZE0 524 aaPredicted RBP16.98■□□□□ 0.31
CT55-201ENST00000276241 CREBZFQ9NS37 354 aa16.98■□□□□ 0.31
CT55-201ENST00000276241 JAG2Q9Y219 1238 aa16.98■□□□□ 0.31
CT55-201ENST00000276241 MYO3BQ8WXR4 1341 aa16.98■□□□□ 0.31
CT55-201ENST00000276241 USP17L8P0C7I0 530 aa16.97■□□□□ 0.31
CT55-201ENST00000276241 VGLL2Q8N8G2 317 aa16.97■□□□□ 0.31
CT55-201ENST00000276241 GMLQ99445 158 aa16.97■□□□□ 0.31
CT55-201ENST00000276241 PA2G4Q9UQ80 394 aaKnown RBP16.97■□□□□ 0.31
CT55-201ENST00000276241 TMEM88BA6NKF7 163 aa16.96■□□□□ 0.31
CT55-201ENST00000276241 SRGAP3O43295 1099 aa16.96■□□□□ 0.31
CT55-201ENST00000276241 PDE8BO95263 885 aa16.96■□□□□ 0.31
CT55-201ENST00000276241 RLBP1P12271 317 aa16.96■□□□□ 0.31
CT55-201ENST00000276241 ZNF280AP59817 542 aaPredicted RBP16.96■□□□□ 0.31
CT55-201ENST00000276241 KIAA0825Q8IV33 1275 aa16.96■□□□□ 0.31
CT55-201ENST00000276241 ZC3H15Q8WU90 426 aaKnown RBP16.96■□□□□ 0.31
CT55-201ENST00000276241 KLRG1Q96E93 195 aa16.96■□□□□ 0.31
CT55-201ENST00000276241 MYOZ2Q9NPC6 264 aa16.96■□□□□ 0.31
CT55-201ENST00000276241 GGA3Q9NZ52 723 aa16.96■□□□□ 0.31
CT55-201ENST00000276241 GNAI2P04899 355 aa16.96■□□□□ 0.3
CT55-201ENST00000276241 IL1R1P14778 569 aa16.96■□□□□ 0.3
CT55-201ENST00000276241 HIBADHP31937 336 aaKnown RBP16.96■□□□□ 0.3
CT55-201ENST00000276241 PUM3Q15397 648 aaKnown RBP16.96■□□□□ 0.3
CT55-201ENST00000276241 VPS37DQ86XT2 251 aa16.96■□□□□ 0.3
CT55-201ENST00000276241 DNAJC5GQ8N7S2 189 aa16.96■□□□□ 0.3
CT55-201ENST00000276241 ZNF408Q9H9D4 720 aa16.96■□□□□ 0.3
CT55-201ENST00000276241 MKRN1Q9UHC7 482 aaKnown RBP16.96■□□□□ 0.3
CT55-201ENST00000276241 ASTN2O75129 1339 aaPredicted RBP16.95■□□□□ 0.3
CT55-201ENST00000276241 ATG9AQ7Z3C6 839 aa16.95■□□□□ 0.3
CT55-201ENST00000276241 OGFOD1Q8N543 542 aa16.95■□□□□ 0.3
CT55-201ENST00000276241 DCPSQ96C86 337 aaKnown RBP16.95■□□□□ 0.3
CT55-201ENST00000276241 YTHDC1Q96MU7 727 aaKnown RBP16.95■□□□□ 0.3
CT55-201ENST00000276241 C1orf115Q9H7X2 142 aa16.95■□□□□ 0.3
CT55-201ENST00000276241 PGAP2Q9UHJ9 254 aa16.95■□□□□ 0.3
CT55-201ENST00000276241 IQSEC3Q9UPP2 1182 aaPredicted RBP16.95■□□□□ 0.3
CT55-201ENST00000276241 ADM5C9JUS6 153 aa16.94■□□□□ 0.3
CT55-201ENST00000276241 F8W031 263 aaPredicted RBP16.94■□□□□ 0.3
CT55-201ENST00000276241 CIAO1O76071 339 aa16.94■□□□□ 0.3
CT55-201ENST00000276241 CAVIN4Q5BKX8 364 aa16.94■□□□□ 0.3
CT55-201ENST00000276241 CDC37L1Q7L3B6 337 aa16.94■□□□□ 0.3
CT55-201ENST00000276241 USP48Q86UV5 1035 aa16.94■□□□□ 0.3
CT55-201ENST00000276241 PANK1Q8TE04 598 aa16.94■□□□□ 0.3
CT55-201ENST00000276241 FAM84BQ96KN1 310 aaPredicted RBP16.94■□□□□ 0.3
CT55-201ENST00000276241 RCAN3Q9UKA8 241 aa16.94■□□□□ 0.3
CT55-201ENST00000276241 ABT1Q9ULW3 272 aaKnown RBP16.94■□□□□ 0.3
CT55-201ENST00000276241 ARAP2Q8WZ64 1704 aa16.94■□□□□ 0.3
CT55-201ENST00000276241 SASH1O94885 1247 aa16.93■□□□□ 0.3
CT55-201ENST00000276241 IFIT1P09914 478 aaKnown RBP16.93■□□□□ 0.3
CT55-201ENST00000276241 SLC5A1P13866 664 aa16.93■□□□□ 0.3
CT55-201ENST00000276241 SCARF1Q14162 830 aa16.93■□□□□ 0.3
CT55-201ENST00000276241 ANGEL2Q5VTE6 544 aaKnown RBP16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms