RNA–Protein interactions for RNA: ENST00000274901.8

HMGCLL1-201, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-201ENST00000274901 CTR9Q6PD62 1173 aa10.67□□□□□ -0.7
HMGCLL1-201ENST00000274901 DPF2Q92785 391 aa10.67□□□□□ -0.7
HMGCLL1-201ENST00000274901 FMNL2Q96PY5 1086 aa10.67□□□□□ -0.7
HMGCLL1-201ENST00000274901 USP28Q96RU2 1077 aa10.67□□□□□ -0.7
HMGCLL1-201ENST00000274901 PDE11AQ9HCR9 933 aa10.67□□□□□ -0.7
HMGCLL1-201ENST00000274901 VPS18Q9P253 973 aa10.67□□□□□ -0.7
HMGCLL1-201ENST00000274901 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.67□□□□□ -0.7
HMGCLL1-201ENST00000274901 NRKQ7Z2Y5 1582 aa10.67□□□□□ -0.7
HMGCLL1-201ENST00000274901 PPFIA3O75145 1194 aa10.66□□□□□ -0.7
HMGCLL1-201ENST00000274901 ATP1A3P13637 1013 aa10.66□□□□□ -0.7
HMGCLL1-201ENST00000274901 ZKSCAN1P17029 563 aaPredicted RBP10.66□□□□□ -0.7
HMGCLL1-201ENST00000274901 MAGEA9P43362 315 aa10.66□□□□□ -0.7
HMGCLL1-201ENST00000274901 NMIQ13287 307 aaPredicted RBP10.66□□□□□ -0.7
HMGCLL1-201ENST00000274901 GNL2Q13823 731 aaKnown RBP10.66□□□□□ -0.7
HMGCLL1-201ENST00000274901 NCAPHQ15003 741 aa10.66□□□□□ -0.7
HMGCLL1-201ENST00000274901 CT47A1Q5JQC4 288 aaPredicted RBP10.66□□□□□ -0.7
HMGCLL1-201ENST00000274901 MAP4K1Q92918 833 aa10.66□□□□□ -0.7
HMGCLL1-201ENST00000274901 MYCBPQ99417 103 aaPredicted RBP10.66□□□□□ -0.7
HMGCLL1-201ENST00000274901 HSD3B7Q9H2F3 369 aa10.66□□□□□ -0.7
HMGCLL1-201ENST00000274901 ARFGAP3Q9NP61 516 aa10.66□□□□□ -0.7
HMGCLL1-201ENST00000274901 USP42Q9H9J4 1324 aaKnown RBP10.66□□□□□ -0.7
HMGCLL1-201ENST00000274901 MAP3K5Q99683 1374 aa10.66□□□□□ -0.7
HMGCLL1-201ENST00000274901 MAP2K7O14733 419 aa10.66□□□□□ -0.7
HMGCLL1-201ENST00000274901 CTAGE5O15320 804 aa10.66□□□□□ -0.7
HMGCLL1-201ENST00000274901 NBPF7P0C2Y1 421 aaPredicted RBP10.66□□□□□ -0.7
HMGCLL1-201ENST00000274901 ATP2B1P20020 1258 aa10.66□□□□□ -0.7
HMGCLL1-201ENST00000274901 GPR161Q8N6U8 529 aaKnown RBP10.66□□□□□ -0.7
HMGCLL1-201ENST00000274901 GPATCH11Q8N954 259 aa10.66□□□□□ -0.7
HMGCLL1-201ENST00000274901 UTP14AQ9BVJ6 771 aaKnown RBP10.66□□□□□ -0.7
HMGCLL1-201ENST00000274901 SUGCTQ9HAC7 445 aa10.66□□□□□ -0.7
HMGCLL1-201ENST00000274901 TOPAZ1Q8N9V7 1692 aa10.65□□□□□ -0.7
HMGCLL1-201ENST00000274901 A0A0D9SFI3 127 aa10.65□□□□□ -0.7
HMGCLL1-201ENST00000274901 BIN1O00499 593 aa10.65□□□□□ -0.7
HMGCLL1-201ENST00000274901 KINO60870 393 aaKnown RBP10.65□□□□□ -0.7
HMGCLL1-201ENST00000274901 MAP3K9P80192 1104 aa10.65□□□□□ -0.7
HMGCLL1-201ENST00000274901 PPP2R3AQ06190 1150 aa10.65□□□□□ -0.7
HMGCLL1-201ENST00000274901 WWC2Q6AWC2 1192 aa10.65□□□□□ -0.7
HMGCLL1-201ENST00000274901 BLOC1S2Q6QNY1 142 aa10.65□□□□□ -0.7
HMGCLL1-201ENST00000274901 ILDR1Q86SU0 546 aaPredicted RBP10.65□□□□□ -0.7
HMGCLL1-201ENST00000274901 FSIP1Q8NA03 581 aa10.65□□□□□ -0.7
HMGCLL1-201ENST00000274901 STK31Q9BXU1 1019 aa10.65□□□□□ -0.7
HMGCLL1-201ENST00000274901 BRMS1Q9HCU9 246 aa10.65□□□□□ -0.7
HMGCLL1-201ENST00000274901 RCOR1Q9UKL0 485 aa10.65□□□□□ -0.7
HMGCLL1-201ENST00000274901 HDAC5Q9UQL6 1122 aa10.65□□□□□ -0.7
HMGCLL1-201ENST00000274901 MRFAP1Q9Y605 127 aa10.65□□□□□ -0.7
HMGCLL1-201ENST00000274901 ZNF142P52746 1687 aaPredicted RBP10.65□□□□□ -0.7
HMGCLL1-201ENST00000274901 N4BP2Q86UW6 1770 aaPredicted RBP10.65□□□□□ -0.7
HMGCLL1-201ENST00000274901 GLRX3O76003 335 aaKnown RBP10.65□□□□□ -0.7
HMGCLL1-201ENST00000274901 FAM160A1Q05DH4 1040 aa10.65□□□□□ -0.7
HMGCLL1-201ENST00000274901 MTHFSDQ2M296 383 aaKnown RBP10.65□□□□□ -0.7
HMGCLL1-201ENST00000274901 SRRTQ9BXP5 876 aaKnown RBP10.65□□□□□ -0.7
HMGCLL1-201ENST00000274901 ZSWIM4Q9H7M6 989 aa10.65□□□□□ -0.7
HMGCLL1-201ENST00000274901 PHAXQ9H814 394 aaKnown RBP10.65□□□□□ -0.7
HMGCLL1-201ENST00000274901 AKAP2Q9Y2D5 859 aa10.65□□□□□ -0.7
HMGCLL1-201ENST00000274901 LMOD1P29536 600 aaPredicted RBP10.64□□□□□ -0.71
HMGCLL1-201ENST00000274901 HSP90AB2PQ58FF8 381 aa10.64□□□□□ -0.71
HMGCLL1-201ENST00000274901 CCDC73Q6ZRK6 1079 aa10.64□□□□□ -0.71
HMGCLL1-201ENST00000274901 TMEM139Q8IV31 216 aa10.64□□□□□ -0.71
HMGCLL1-201ENST00000274901 FMR1NBQ8N0W7 255 aaPredicted RBP10.64□□□□□ -0.71
HMGCLL1-201ENST00000274901 RUFY2Q8WXA3 655 aa10.64□□□□□ -0.71
HMGCLL1-201ENST00000274901 KIFC2Q96AC6 838 aa10.64□□□□□ -0.71
HMGCLL1-201ENST00000274901 ZSCAN16Q9H4T2 348 aaPredicted RBP10.64□□□□□ -0.71
HMGCLL1-201ENST00000274901 FAN1Q9Y2M0 1017 aa10.64□□□□□ -0.71
HMGCLL1-201ENST00000274901 A0A1B0GVL5 298 aa10.64□□□□□ -0.71
HMGCLL1-201ENST00000274901 TMEM232C9JQI7 657 aa10.64□□□□□ -0.71
HMGCLL1-201ENST00000274901 H3BQV1 296 aa10.64□□□□□ -0.71
HMGCLL1-201ENST00000274901 APOBRQ0VD83 1088 aa10.64□□□□□ -0.71
HMGCLL1-201ENST00000274901 MCM6Q14566 821 aa10.64□□□□□ -0.71
HMGCLL1-201ENST00000274901 IFFO2Q5TF58 517 aa10.64□□□□□ -0.71
HMGCLL1-201ENST00000274901 LRRC31Q6UY01 552 aa10.64□□□□□ -0.71
HMGCLL1-201ENST00000274901 ZNF589Q86UQ0 364 aaPredicted RBP10.64□□□□□ -0.71
HMGCLL1-201ENST00000274901 DHX58Q96C10 678 aa10.64□□□□□ -0.71
HMGCLL1-201ENST00000274901 SEC62Q99442 399 aaKnown RBP10.64□□□□□ -0.71
HMGCLL1-201ENST00000274901 CFAP45Q9UL16 551 aa10.64□□□□□ -0.71
HMGCLL1-201ENST00000274901 ABCC6O95255 1503 aa10.63□□□□□ -0.71
HMGCLL1-201ENST00000274901 TPM1P09493 284 aa10.63□□□□□ -0.71
HMGCLL1-201ENST00000274901 NDUFA8P51970 172 aa10.63□□□□□ -0.71
HMGCLL1-201ENST00000274901 HSPA2P54652 639 aa10.63□□□□□ -0.71
HMGCLL1-201ENST00000274901 NLRP6P59044 892 aa10.63□□□□□ -0.71
HMGCLL1-201ENST00000274901 PSME1Q06323 249 aa10.63□□□□□ -0.71
HMGCLL1-201ENST00000274901 CCDC30Q5VVM6 783 aa10.63□□□□□ -0.71
HMGCLL1-201ENST00000274901 ISM2Q6H9L7 571 aa10.63□□□□□ -0.71
HMGCLL1-201ENST00000274901 PNKPQ96T60 521 aa10.63□□□□□ -0.71
HMGCLL1-201ENST00000274901 LRRC2Q9BYS8 371 aa10.63□□□□□ -0.71
HMGCLL1-201ENST00000274901 SIL1Q9H173 461 aa10.63□□□□□ -0.71
HMGCLL1-201ENST00000274901 RPS6KA5O75582 802 aa10.63□□□□□ -0.71
HMGCLL1-201ENST00000274901 TFRCP02786 760 aaKnown RBP10.63□□□□□ -0.71
HMGCLL1-201ENST00000274901 TUBB4AP04350 444 aa10.63□□□□□ -0.71
HMGCLL1-201ENST00000274901 CORO7P57737 925 aa10.63□□□□□ -0.71
HMGCLL1-201ENST00000274901 FANCCQ00597 558 aa10.63□□□□□ -0.71
HMGCLL1-201ENST00000274901 ESCO1Q5FWF5 840 aa10.63□□□□□ -0.71
HMGCLL1-201ENST00000274901 BEND6Q5SZJ8 279 aaPredicted RBP10.63□□□□□ -0.71
HMGCLL1-201ENST00000274901 LEKR1Q6ZMV7 388 aa10.63□□□□□ -0.71
HMGCLL1-201ENST00000274901 GOLGA6L1Q8N7Z2 621 aa10.63□□□□□ -0.71
HMGCLL1-201ENST00000274901 RABGGTAQ92696 567 aa10.63□□□□□ -0.71
HMGCLL1-201ENST00000274901 PPP2R2CQ9Y2T4 447 aa10.63□□□□□ -0.71
HMGCLL1-201ENST00000274901 PEAK1Q9H792 1746 aa10.63□□□□□ -0.71
HMGCLL1-201ENST00000274901 OVOS2A0A0J9YW53 1432 aa10.62□□□□□ -0.71
HMGCLL1-201ENST00000274901 OVOS2Q6IE36 1432 aa10.62□□□□□ -0.71
HMGCLL1-201ENST00000274901 COL15A1P39059 1388 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms