RNA–Protein interactions for RNA: ENST00000274695.8

CDKAL1-201, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKAL1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-201ENST00000274695 USP48Q86UV5 1035 aa7.52□□□□□ -1.21
CDKAL1-201ENST00000274695 TRIM50Q86XT4 487 aa7.52□□□□□ -1.21
CDKAL1-201ENST00000274695 UPF2Q9HAU5 1272 aaKnown RBP7.52□□□□□ -1.21
CDKAL1-201ENST00000274695 TTF2Q9UNY4 1162 aaKnown RBP7.52□□□□□ -1.21
CDKAL1-201ENST00000274695 EVC2Q86UK5 1308 aa7.52□□□□□ -1.21
CDKAL1-201ENST00000274695 ATF4P18848 351 aaPredicted RBP7.52□□□□□ -1.21
CDKAL1-201ENST00000274695 PLCB3Q01970 1234 aa7.52□□□□□ -1.21
CDKAL1-201ENST00000274695 KLHL40Q2TBA0 621 aa7.52□□□□□ -1.21
CDKAL1-201ENST00000274695 COLQQ9Y215 455 aaPredicted RBP7.52□□□□□ -1.21
CDKAL1-201ENST00000274695 THRAP3Q9Y2W1 955 aaKnown RBP7.52□□□□□ -1.21
CDKAL1-201ENST00000274695 SSH2Q76I76 1423 aa7.52□□□□□ -1.21
CDKAL1-201ENST00000274695 LMO7Q8WWI1 1683 aa7.52□□□□□ -1.21
CDKAL1-201ENST00000274695 DNAJC6O75061 913 aa7.51□□□□□ -1.21
CDKAL1-201ENST00000274695 HSP90AB4PQ58FF6 505 aa7.51□□□□□ -1.21
CDKAL1-201ENST00000274695 COL22A1Q8NFW1 1626 aaPredicted RBP7.51□□□□□ -1.21
CDKAL1-201ENST00000274695 MCM5P33992 734 aa7.51□□□□□ -1.21
CDKAL1-201ENST00000274695 TMPOP42166 694 aaKnown RBP7.51□□□□□ -1.21
CDKAL1-201ENST00000274695 RHBDL3P58872 404 aa7.51□□□□□ -1.21
CDKAL1-201ENST00000274695 PROX2Q3B8N5 592 aa7.51□□□□□ -1.21
CDKAL1-201ENST00000274695 RETREG3Q86VR2 466 aa7.51□□□□□ -1.21
CDKAL1-201ENST00000274695 CHMP4BQ9H444 224 aaKnown RBP7.51□□□□□ -1.21
CDKAL1-201ENST00000274695 SPC25Q9HBM1 224 aa7.51□□□□□ -1.21
CDKAL1-201ENST00000274695 CCDC173Q0VFZ6 552 aa7.51□□□□□ -1.21
CDKAL1-201ENST00000274695 MAP7D1Q3KQU3 841 aa7.51□□□□□ -1.21
CDKAL1-201ENST00000274695 SWT1Q5T5J6 900 aaKnown RBP7.51□□□□□ -1.21
CDKAL1-201ENST00000274695 MRFAP1L1Q96HT8 127 aa7.51□□□□□ -1.21
CDKAL1-201ENST00000274695 IER2Q9BTL4 223 aa7.51□□□□□ -1.21
CDKAL1-201ENST00000274695 CYLDQ9NQC7 956 aa7.51□□□□□ -1.21
CDKAL1-201ENST00000274695 NDUFB5O43674 189 aa7.5□□□□□ -1.21
CDKAL1-201ENST00000274695 A2ML1A8K2U0 1454 aa7.5□□□□□ -1.21
CDKAL1-201ENST00000274695 NWD1Q149M9 1564 aa7.5□□□□□ -1.21
CDKAL1-201ENST00000274695 SALL3Q9BXA9 1300 aa7.5□□□□□ -1.21
CDKAL1-201ENST00000274695 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.5□□□□□ -1.21
CDKAL1-201ENST00000274695 NUDT7P0C024 238 aa7.5□□□□□ -1.21
CDKAL1-201ENST00000274695 PLCG2P16885 1265 aa7.5□□□□□ -1.21
CDKAL1-201ENST00000274695 MZF1P28698 734 aaPredicted RBP7.5□□□□□ -1.21
CDKAL1-201ENST00000274695 OSBPL3Q9H4L5 887 aa7.5□□□□□ -1.21
CDKAL1-201ENST00000274695 TERF2IPQ9NYB0 399 aa7.5□□□□□ -1.21
CDKAL1-201ENST00000274695 OVOS2A0A0J9YW53 1432 aa7.5□□□□□ -1.21
CDKAL1-201ENST00000274695 OVOS2Q6IE36 1432 aa7.5□□□□□ -1.21
CDKAL1-201ENST00000274695 PIK3C2AO00443 1686 aa7.49□□□□□ -1.21
CDKAL1-201ENST00000274695 TRIM6-TRIM34B2RNG4 842 aa7.49□□□□□ -1.21
CDKAL1-201ENST00000274695 PDGFRBP09619 1106 aa7.49□□□□□ -1.21
CDKAL1-201ENST00000274695 RGS3P49796 1198 aa7.49□□□□□ -1.21
CDKAL1-201ENST00000274695 FAM26DQ5JW98 314 aa7.49□□□□□ -1.21
CDKAL1-201ENST00000274695 FAM129BQ96TA1 746 aa7.49□□□□□ -1.21
CDKAL1-201ENST00000274695 PNNQ9H307 717 aaKnown RBP7.49□□□□□ -1.21
CDKAL1-201ENST00000274695 TNNQ9UQP3 1299 aa7.49□□□□□ -1.21
CDKAL1-201ENST00000274695 RIMS2Q9UQ26 1411 aa7.49□□□□□ -1.21
CDKAL1-201ENST00000274695 ESPNB1AK53 854 aa7.49□□□□□ -1.21
CDKAL1-201ENST00000274695 GJA8P48165 433 aa7.49□□□□□ -1.21
CDKAL1-201ENST00000274695 SOGA3Q5TF21 947 aa7.49□□□□□ -1.21
CDKAL1-201ENST00000274695 DESI1Q6ICB0 168 aa7.49□□□□□ -1.21
CDKAL1-201ENST00000274695 ZNF654Q8IZM8 581 aa7.49□□□□□ -1.21
CDKAL1-201ENST00000274695 TNPO1Q92973 898 aaKnown RBP7.49□□□□□ -1.21
CDKAL1-201ENST00000274695 CFAP53Q96M91 514 aa7.49□□□□□ -1.21
CDKAL1-201ENST00000274695 TNFRSF10BO14763 440 aa7.49□□□□□ -1.21
CDKAL1-201ENST00000274695 OFD1O75665 1012 aa7.49□□□□□ -1.21
CDKAL1-201ENST00000274695 FAM13AO94988 1023 aa7.49□□□□□ -1.21
CDKAL1-201ENST00000274695 PDE6BP35913 854 aa7.49□□□□□ -1.21
CDKAL1-201ENST00000274695 AFAP1Q8N556 730 aa7.49□□□□□ -1.21
CDKAL1-201ENST00000274695 SSH1Q8WYL5 1049 aa7.49□□□□□ -1.21
CDKAL1-201ENST00000274695 DIP2BQ9P265 1576 aa7.49□□□□□ -1.21
CDKAL1-201ENST00000274695 PNMA6FA0A0J9YX94 578 aa7.48□□□□□ -1.21
CDKAL1-201ENST00000274695 FAM221BA6H8Z2 402 aa7.48□□□□□ -1.21
CDKAL1-201ENST00000274695 EIF1AXP47813 144 aaKnown RBP7.48□□□□□ -1.21
CDKAL1-201ENST00000274695 MTHFSP49914 203 aa7.48□□□□□ -1.21
CDKAL1-201ENST00000274695 NFE2L2Q16236 605 aa7.48□□□□□ -1.21
CDKAL1-201ENST00000274695 CHD1LQ86WJ1 897 aa7.48□□□□□ -1.21
CDKAL1-201ENST00000274695 NME8Q8N427 588 aa7.48□□□□□ -1.21
CDKAL1-201ENST00000274695 MRPL50Q8N5N7 158 aaKnown RBP7.48□□□□□ -1.21
CDKAL1-201ENST00000274695 TSR2Q969E8 191 aaKnown RBP7.48□□□□□ -1.21
CDKAL1-201ENST00000274695 DOLKQ9UPQ8 538 aa7.48□□□□□ -1.21
CDKAL1-201ENST00000274695 MORC1Q86VD1 984 aa7.48□□□□□ -1.21
CDKAL1-201ENST00000274695 NKX2-3Q8TAU0 364 aa7.48□□□□□ -1.21
CDKAL1-201ENST00000274695 NIF3L1Q9GZT8 377 aa7.48□□□□□ -1.21
CDKAL1-201ENST00000274695 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.48□□□□□ -1.21
CDKAL1-201ENST00000274695 MRC1P22897 1456 aa7.48□□□□□ -1.21
CDKAL1-201ENST00000274695 ABCC6O95255 1503 aa7.48□□□□□ -1.21
CDKAL1-201ENST00000274695 USP31Q70CQ4 1352 aa7.48□□□□□ -1.21
CDKAL1-201ENST00000274695 PAK2Q13177 524 aa7.47□□□□□ -1.21
CDKAL1-201ENST00000274695 PUS10Q3MIT2 529 aaKnown RBP7.47□□□□□ -1.21
CDKAL1-201ENST00000274695 CHRDL2Q6WN34 429 aa7.47□□□□□ -1.21
CDKAL1-201ENST00000274695 GAS2L3Q86XJ1 694 aa7.47□□□□□ -1.21
CDKAL1-201ENST00000274695 ZNF408Q9H9D4 720 aa7.47□□□□□ -1.21
CDKAL1-201ENST00000274695 ATMINO43313 823 aaPredicted RBP7.47□□□□□ -1.21
CDKAL1-201ENST00000274695 PTCD1O75127 700 aaKnown RBP7.47□□□□□ -1.21
CDKAL1-201ENST00000274695 ENOX2Q16206 610 aaKnown RBP7.47□□□□□ -1.21
CDKAL1-201ENST00000274695 PLEKHG4Q58EX7 1191 aa7.47□□□□□ -1.21
CDKAL1-201ENST00000274695 RNF19BQ6ZMZ0 732 aa7.47□□□□□ -1.21
CDKAL1-201ENST00000274695 CRELD1Q96HD1 420 aa7.47□□□□□ -1.21
CDKAL1-201ENST00000274695 PNMA2Q9UL42 364 aa7.47□□□□□ -1.21
CDKAL1-201ENST00000274695 CFAP65Q6ZU64 1925 aaKnown RBP7.47□□□□□ -1.21
CDKAL1-201ENST00000274695 APLP1P51693 650 aa7.47□□□□□ -1.21
CDKAL1-201ENST00000274695 EVA1CP58658 441 aa7.47□□□□□ -1.21
CDKAL1-201ENST00000274695 INTS3Q68E01 1043 aaKnown RBP7.47□□□□□ -1.21
CDKAL1-201ENST00000274695 ATCAYQ86WG3 371 aa7.47□□□□□ -1.21
CDKAL1-201ENST00000274695 SIRT2Q8IXJ6 389 aa7.47□□□□□ -1.21
CDKAL1-201ENST00000274695 PANK2Q9BZ23 570 aa7.47□□□□□ -1.21
CDKAL1-201ENST00000274695 NEUROD4Q9HD90 331 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms