RNA–Protein interactions for RNA: ENST00000274327.11

TRIM23-202, Transcript of tripartite motif containing 23, humanhuman

TSL 1 (best) BASIC

Gene TRIM23, Length 1,829 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-202ENST00000274327 NLGN1Q8N2Q7 840 aa17.53■□□□□ 0.4
TRIM23-202ENST00000274327 PALD1Q9ULE6 856 aa17.53■□□□□ 0.4
TRIM23-202ENST00000274327 CCDC171Q6TFL3 1326 aa17.53■□□□□ 0.4
TRIM23-202ENST00000274327 ANKRD31Q8N7Z5 1873 aa17.53■□□□□ 0.4
TRIM23-202ENST00000274327 FKBP4Q02790 459 aaKnown RBP eCLIP17.52■□□□□ 0.4
TRIM23-202ENST00000274327 EN1Q05925 392 aaPredicted RBP17.52■□□□□ 0.4
TRIM23-202ENST00000274327 CRY2Q49AN0 593 aa17.52■□□□□ 0.4
TRIM23-202ENST00000274327 GRAPQ13588 217 aa17.51■□□□□ 0.39
TRIM23-202ENST00000274327 HSCBQ8IWL3 235 aa17.51■□□□□ 0.39
TRIM23-202ENST00000274327 GRAPLQ8TC17 118 aaPredicted RBP17.51■□□□□ 0.39
TRIM23-202ENST00000274327 DOCK2Q92608 1830 aa17.51■□□□□ 0.39
TRIM23-202ENST00000274327 MYO5AQ9Y4I1 1855 aaKnown RBP17.51■□□□□ 0.39
TRIM23-202ENST00000274327 KLRG2A4D1S0 409 aaPredicted RBP17.51■□□□□ 0.39
TRIM23-202ENST00000274327 CHGBP05060 677 aa17.51■□□□□ 0.39
TRIM23-202ENST00000274327 ZMYM1Q5SVZ6 1142 aa17.51■□□□□ 0.39
TRIM23-202ENST00000274327 PI16Q6UXB8 463 aa17.51■□□□□ 0.39
TRIM23-202ENST00000274327 ZNF589Q86UQ0 364 aaPredicted RBP17.51■□□□□ 0.39
TRIM23-202ENST00000274327 KCNB2Q92953 911 aa17.51■□□□□ 0.39
TRIM23-202ENST00000274327 ANO8Q9HCE9 1232 aaPredicted RBP17.51■□□□□ 0.39
TRIM23-202ENST00000274327 HELLSQ9NRZ9 838 aa17.51■□□□□ 0.39
TRIM23-202ENST00000274327 RNF113AO15541 343 aaKnown RBP17.5■□□□□ 0.39
TRIM23-202ENST00000274327 MCMDC2Q4G0Z9 681 aa17.5■□□□□ 0.39
TRIM23-202ENST00000274327 MAP4K1Q92918 833 aa17.5■□□□□ 0.39
TRIM23-202ENST00000274327 ANKRD2Q9GZV1 360 aa17.5■□□□□ 0.39
TRIM23-202ENST00000274327 CD2BP2O95400 341 aaKnown RBP17.49■□□□□ 0.39
TRIM23-202ENST00000274327 SLC15A2Q16348 729 aa17.49■□□□□ 0.39
TRIM23-202ENST00000274327 LRRFIP1Q32MZ4 808 aaKnown RBP17.49■□□□□ 0.39
TRIM23-202ENST00000274327 HMG20BQ9P0W2 317 aa17.49■□□□□ 0.39
TRIM23-202ENST00000274327 ZNF804BA4D1E1 1349 aa17.49■□□□□ 0.39
TRIM23-202ENST00000274327 CYP2E1P05181 493 aaPredicted RBP17.49■□□□□ 0.39
TRIM23-202ENST00000274327 ZFYP08048 801 aaPredicted RBP17.49■□□□□ 0.39
TRIM23-202ENST00000274327 NECTIN1Q15223 517 aa17.49■□□□□ 0.39
TRIM23-202ENST00000274327 TTF1Q15361 905 aaPredicted RBP17.49■□□□□ 0.39
TRIM23-202ENST00000274327 SEC62Q99442 399 aaKnown RBP17.49■□□□□ 0.39
TRIM23-202ENST00000274327 BCAMP50895 628 aa17.48■□□□□ 0.39
TRIM23-202ENST00000274327 SNX14Q9Y5W7 946 aa17.48■□□□□ 0.39
TRIM23-202ENST00000274327 HOXA10P31260 410 aaPredicted RBP17.47■□□□□ 0.39
TRIM23-202ENST00000274327 RASGRF1Q13972 1273 aa17.47■□□□□ 0.39
TRIM23-202ENST00000274327 SPATA5Q8NB90 893 aa17.47■□□□□ 0.39
TRIM23-202ENST00000274327 RPGRQ92834 1020 aaKnown RBP17.47■□□□□ 0.39
TRIM23-202ENST00000274327 RBM17Q96I25 401 aaKnown RBP17.47■□□□□ 0.39
TRIM23-202ENST00000274327 PIH1D3Q9NQM4 214 aaKnown RBP17.47■□□□□ 0.39
TRIM23-202ENST00000274327 STK32BQ9NY57 414 aa17.47■□□□□ 0.39
TRIM23-202ENST00000274327 RBM8AQ9Y5S9 174 aaKnown RBP17.47■□□□□ 0.39
TRIM23-202ENST00000274327 BAG6P46379 1132 aa17.47■□□□□ 0.39
TRIM23-202ENST00000274327 SLFNL1Q499Z3 407 aa17.47■□□□□ 0.39
TRIM23-202ENST00000274327 CCDC129Q6ZRS4 1044 aa17.47■□□□□ 0.39
TRIM23-202ENST00000274327 RASEFQ8IZ41 740 aa17.47■□□□□ 0.39
TRIM23-202ENST00000274327 IL27Q8NEV9 243 aa17.47■□□□□ 0.39
TRIM23-202ENST00000274327 WTIPA6NIX2 430 aaPredicted RBP17.46■□□□□ 0.39
TRIM23-202ENST00000274327 LRRC37AA6NMS7 1700 aa17.46■□□□□ 0.39
TRIM23-202ENST00000274327 MAST3O60307 1309 aa17.46■□□□□ 0.39
TRIM23-202ENST00000274327 NBR1Q14596 966 aa17.46■□□□□ 0.39
TRIM23-202ENST00000274327 IRS2Q9Y4H2 1338 aa17.45■□□□□ 0.38
TRIM23-202ENST00000274327 K7ELQ4 463 aaPredicted RBP17.45■□□□□ 0.38
TRIM23-202ENST00000274327 ZBTB22O15209 634 aa17.45■□□□□ 0.38
TRIM23-202ENST00000274327 MMP10P09238 476 aa17.45■□□□□ 0.38
TRIM23-202ENST00000274327 SF3B2Q13435 895 aaKnown RBP17.45■□□□□ 0.38
TRIM23-202ENST00000274327 ZSCAN25Q6NSZ9 544 aa17.45■□□□□ 0.38
TRIM23-202ENST00000274327 PRPF40BQ6NWY9 871 aaKnown RBP17.45■□□□□ 0.38
TRIM23-202ENST00000274327 CRAMP1Q96RY5 1269 aa17.45■□□□□ 0.38
TRIM23-202ENST00000274327 BRIP1Q9BX63 1249 aa17.45■□□□□ 0.38
TRIM23-202ENST00000274327 ST18O60284 1047 aa17.44■□□□□ 0.38
TRIM23-202ENST00000274327 ADD2P35612 726 aa17.44■□□□□ 0.38
TRIM23-202ENST00000274327 CREB3L3Q68CJ9 461 aa17.44■□□□□ 0.38
TRIM23-202ENST00000274327 FBXO33Q7Z6M2 555 aa17.44■□□□□ 0.38
TRIM23-202ENST00000274327 APPBP2Q92624 585 aa17.44■□□□□ 0.38
TRIM23-202ENST00000274327 OSBP2Q969R2 916 aa17.44■□□□□ 0.38
TRIM23-202ENST00000274327 FAM84BQ96KN1 310 aaPredicted RBP17.44■□□□□ 0.38
TRIM23-202ENST00000274327 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.44■□□□□ 0.38
TRIM23-202ENST00000274327 PARP3Q9Y6F1 533 aa17.44■□□□□ 0.38
TRIM23-202ENST00000274327 MYH13Q9UKX3 1938 aa17.44■□□□□ 0.38
TRIM23-202ENST00000274327 M0R2C6 588 aa17.44■□□□□ 0.38
TRIM23-202ENST00000274327 GYG1P46976 350 aa17.44■□□□□ 0.38
TRIM23-202ENST00000274327 COL11A2P13942 1736 aaPredicted RBP17.43■□□□□ 0.38
TRIM23-202ENST00000274327 SLC27A2O14975 620 aa17.43■□□□□ 0.38
TRIM23-202ENST00000274327 BBOX1O75936 387 aa17.43■□□□□ 0.38
TRIM23-202ENST00000274327 KCNJ4P48050 445 aa17.43■□□□□ 0.38
TRIM23-202ENST00000274327 UBE3CQ15386 1083 aa17.43■□□□□ 0.38
TRIM23-202ENST00000274327 CAVIN4Q5BKX8 364 aa17.43■□□□□ 0.38
TRIM23-202ENST00000274327 DEFB132Q7Z7B7 95 aa17.43■□□□□ 0.38
TRIM23-202ENST00000274327 DSCC1Q9BVC3 393 aa17.43■□□□□ 0.38
TRIM23-202ENST00000274327 GNL3LQ9NVN8 582 aaKnown RBP17.43■□□□□ 0.38
TRIM23-202ENST00000274327 LEMD3Q9Y2U8 911 aa17.43■□□□□ 0.38
TRIM23-202ENST00000274327 COL1A1P02452 1464 aaPredicted RBP17.43■□□□□ 0.38
TRIM23-202ENST00000274327 NEK4P51957 841 aa17.42■□□□□ 0.38
TRIM23-202ENST00000274327 U3KPZ7 1027 aaPredicted RBP17.42■□□□□ 0.38
TRIM23-202ENST00000274327 XDHP47989 1333 aa17.42■□□□□ 0.38
TRIM23-202ENST00000274327 KLRK1P26718 216 aa17.42■□□□□ 0.38
TRIM23-202ENST00000274327 TSGA10IPQ3SY00 556 aa17.42■□□□□ 0.38
TRIM23-202ENST00000274327 MSL1Q68DK7 614 aa17.42■□□□□ 0.38
TRIM23-202ENST00000274327 SLC51AQ86UW1 340 aa17.42■□□□□ 0.38
TRIM23-202ENST00000274327 TM6SF1Q9BZW5 370 aa17.42■□□□□ 0.38
TRIM23-202ENST00000274327 LTBP1Q14766 1721 aa17.41■□□□□ 0.38
TRIM23-202ENST00000274327 PDS5AQ29RF7 1337 aaKnown RBP17.41■□□□□ 0.38
TRIM23-202ENST00000274327 TCRBV5S4A2TA0A5A2 114 aa17.41■□□□□ 0.38
TRIM23-202ENST00000274327 SEMA3EO15041 775 aa17.41■□□□□ 0.38
TRIM23-202ENST00000274327 PDE6AP16499 860 aa17.41■□□□□ 0.38
TRIM23-202ENST00000274327 WASHC4Q2M389 1173 aa17.41■□□□□ 0.38
TRIM23-202ENST00000274327 WWC3Q9ULE0 1092 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms