RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 RHOXF2BP0C7M4 288 aa14.87□□□□□ -0.03
HERC6-202ENST00000273960 CDC25BP30305 580 aa14.87□□□□□ -0.03
HERC6-202ENST00000273960 ICE2Q659A1 982 aa14.87□□□□□ -0.03
HERC6-202ENST00000273960 REXO1L1PQ8IX06 675 aa14.87□□□□□ -0.03
HERC6-202ENST00000273960 GDAP1L1Q96MZ0 367 aa14.87□□□□□ -0.03
HERC6-202ENST00000273960 HINFPQ9BQA5 517 aa14.87□□□□□ -0.03
HERC6-202ENST00000273960 RHOXF2Q9BQY4 288 aa14.87□□□□□ -0.03
HERC6-202ENST00000273960 JRKLQ9Y4A0 524 aa14.87□□□□□ -0.03
HERC6-202ENST00000273960 TADA3O75528 432 aa14.87□□□□□ -0.03
HERC6-202ENST00000273960 GLRX3O76003 335 aaKnown RBP14.87□□□□□ -0.03
HERC6-202ENST00000273960 ATF3P18847 181 aa14.87□□□□□ -0.03
HERC6-202ENST00000273960 Q6ZUG5 572 aa14.87□□□□□ -0.03
HERC6-202ENST00000273960 KLHDC4Q8TBB5 520 aa14.87□□□□□ -0.03
HERC6-202ENST00000273960 DPF2Q92785 391 aa14.87□□□□□ -0.03
HERC6-202ENST00000273960 LGR6Q9HBX8 967 aa14.87□□□□□ -0.03
HERC6-202ENST00000273960 SPATA31D1Q6ZQQ2 1576 aa14.87□□□□□ -0.03
HERC6-202ENST00000273960 FLT4P35916 1363 aa14.86□□□□□ -0.03
HERC6-202ENST00000273960 TOB2Q14106 344 aaPredicted RBP14.86□□□□□ -0.03
HERC6-202ENST00000273960 CCDC30Q5VVM6 783 aa14.86□□□□□ -0.03
HERC6-202ENST00000273960 NAT10Q9H0A0 1025 aaKnown RBP14.86□□□□□ -0.03
HERC6-202ENST00000273960 CFAP45Q9UL16 551 aa14.86□□□□□ -0.03
HERC6-202ENST00000273960 REREQ9P2R6 1566 aa14.86□□□□□ -0.03
HERC6-202ENST00000273960 MYCNP04198 464 aaPredicted RBP14.86□□□□□ -0.03
HERC6-202ENST00000273960 PSMA5P28066 241 aa14.86□□□□□ -0.03
HERC6-202ENST00000273960 PPP2R3AQ06190 1150 aa14.86□□□□□ -0.03
HERC6-202ENST00000273960 ZNF589Q86UQ0 364 aaPredicted RBP14.86□□□□□ -0.03
HERC6-202ENST00000273960 TMEM232C9JQI7 657 aa14.86□□□□□ -0.03
HERC6-202ENST00000273960 NECTIN1Q15223 517 aa14.86□□□□□ -0.03
HERC6-202ENST00000273960 NBPF6Q5VWK0 638 aa14.86□□□□□ -0.03
HERC6-202ENST00000273960 NBPF4Q96M43 638 aa14.86□□□□□ -0.03
HERC6-202ENST00000273960 GJB4Q9NTQ9 266 aa14.86□□□□□ -0.03
HERC6-202ENST00000273960 FAN1Q9Y2M0 1017 aa14.86□□□□□ -0.03
HERC6-202ENST00000273960 FBXO18Q8NFZ0 1043 aa14.85□□□□□ -0.03
HERC6-202ENST00000273960 SIRT1Q96EB6 747 aa14.85□□□□□ -0.03
HERC6-202ENST00000273960 LZTFL1Q9NQ48 299 aa14.85□□□□□ -0.03
HERC6-202ENST00000273960 TLR7Q9NYK1 1049 aaKnown RBP14.85□□□□□ -0.03
HERC6-202ENST00000273960 RESTQ13127 1097 aa14.85□□□□□ -0.03
HERC6-202ENST00000273960 CCDC93Q567U6 631 aa14.85□□□□□ -0.03
HERC6-202ENST00000273960 SARM1Q6SZW1 724 aa14.85□□□□□ -0.03
HERC6-202ENST00000273960 EFCC1Q9HA90 598 aa14.85□□□□□ -0.03
HERC6-202ENST00000273960 FAM193AP78312 1265 aa14.85□□□□□ -0.03
HERC6-202ENST00000273960 PPARDQ03181 441 aa14.85□□□□□ -0.03
HERC6-202ENST00000273960 LONRF2Q1L5Z9 754 aa14.85□□□□□ -0.03
HERC6-202ENST00000273960 CCDC12Q8WUD4 166 aaPredicted RBP14.85□□□□□ -0.03
HERC6-202ENST00000273960 CPLX3Q8WVH0 158 aa14.85□□□□□ -0.03
HERC6-202ENST00000273960 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.85□□□□□ -0.03
HERC6-202ENST00000273960 PI4KAP2A4QPH2 592 aa14.84□□□□□ -0.03
HERC6-202ENST00000273960 PIP4K2AP48426 406 aaPredicted RBP14.84□□□□□ -0.03
HERC6-202ENST00000273960 NDUFA8P51970 172 aa14.84□□□□□ -0.03
HERC6-202ENST00000273960 ADKP55263 362 aaKnown RBP14.84□□□□□ -0.03
HERC6-202ENST00000273960 PI4KAP1Q8N8J0 262 aa14.84□□□□□ -0.03
HERC6-202ENST00000273960 ECHDC1Q9NTX5 307 aa14.84□□□□□ -0.03
HERC6-202ENST00000273960 RPS6KB1P23443 525 aa14.84□□□□□ -0.03
HERC6-202ENST00000273960 MARCKSP29966 332 aaPredicted RBP14.84□□□□□ -0.03
HERC6-202ENST00000273960 UBASH3AP57075 661 aa14.84□□□□□ -0.03
HERC6-202ENST00000273960 APOBRQ0VD83 1088 aa14.84□□□□□ -0.03
HERC6-202ENST00000273960 DHX8Q14562 1220 aaKnown RBP14.84□□□□□ -0.03
HERC6-202ENST00000273960 DHX37Q8IY37 1157 aaKnown RBP14.84□□□□□ -0.03
HERC6-202ENST00000273960 C9orf78Q9NZ63 289 aaPredicted RBP14.84□□□□□ -0.03
HERC6-202ENST00000273960 MAP2P11137 1827 aaKnown RBP14.84□□□□□ -0.03
HERC6-202ENST00000273960 KCNQ3O43525 872 aa14.83□□□□□ -0.03
HERC6-202ENST00000273960 ACTN2P35609 894 aa14.83□□□□□ -0.03
HERC6-202ENST00000273960 FANCCQ00597 558 aa14.83□□□□□ -0.03
HERC6-202ENST00000273960 MICALL1Q8N3F8 863 aa14.83□□□□□ -0.03
HERC6-202ENST00000273960 GOLGA5Q8TBA6 731 aa14.83□□□□□ -0.03
HERC6-202ENST00000273960 DHX58Q96C10 678 aa14.83□□□□□ -0.03
HERC6-202ENST00000273960 STK38Q15208 465 aa14.83□□□□□ -0.04
HERC6-202ENST00000273960 LRRFIP1Q32MZ4 808 aaKnown RBP14.83□□□□□ -0.04
HERC6-202ENST00000273960 RBM43Q6ZSC3 357 aaKnown RBP14.83□□□□□ -0.04
HERC6-202ENST00000273960 KRT28Q7Z3Y7 464 aa14.83□□□□□ -0.04
HERC6-202ENST00000273960 SSH3Q8TE77 659 aa14.83□□□□□ -0.04
HERC6-202ENST00000273960 HDAC5Q9UQL6 1122 aa14.83□□□□□ -0.04
HERC6-202ENST00000273960 A0A1B0GUL7 405 aa14.83□□□□□ -0.04
HERC6-202ENST00000273960 EIF3CLB5ME19 914 aaKnown RBP14.83□□□□□ -0.04
HERC6-202ENST00000273960 NOM1Q5C9Z4 860 aaKnown RBP14.83□□□□□ -0.04
HERC6-202ENST00000273960 CREBRFQ8IUR6 639 aa14.83□□□□□ -0.04
HERC6-202ENST00000273960 CCDC150Q8NCX0 1101 aa14.83□□□□□ -0.04
HERC6-202ENST00000273960 IL17REQ8NFR9 667 aa14.83□□□□□ -0.04
HERC6-202ENST00000273960 EIF3CQ99613 913 aaKnown RBP14.83□□□□□ -0.04
HERC6-202ENST00000273960 DEF6Q9H4E7 631 aa14.83□□□□□ -0.04
HERC6-202ENST00000273960 PARP3Q9Y6F1 533 aa14.83□□□□□ -0.04
HERC6-202ENST00000273960 AATKQ6ZMQ8 1374 aa14.82□□□□□ -0.04
HERC6-202ENST00000273960 GCP02774 474 aa14.82□□□□□ -0.04
HERC6-202ENST00000273960 BTBD11A6QL63 1104 aa14.82□□□□□ -0.04
HERC6-202ENST00000273960 FAM160A1Q05DH4 1040 aa14.82□□□□□ -0.04
HERC6-202ENST00000273960 MTX1Q13505 466 aa14.82□□□□□ -0.04
HERC6-202ENST00000273960 MUM1L1Q5H9M0 696 aa14.82□□□□□ -0.04
HERC6-202ENST00000273960 SLC3A2P08195 630 aaKnown RBP14.81□□□□□ -0.04
HERC6-202ENST00000273960 TOP1P11387 765 aaKnown RBP14.81□□□□□ -0.04
HERC6-202ENST00000273960 TRIM65Q6PJ69 517 aa14.81□□□□□ -0.04
HERC6-202ENST00000273960 GPATCH3Q96I76 525 aa14.81□□□□□ -0.04
HERC6-202ENST00000273960 FUT8Q9BYC5 575 aa14.81□□□□□ -0.04
HERC6-202ENST00000273960 BICC1Q9H694 974 aaKnown RBP14.81□□□□□ -0.04
HERC6-202ENST00000273960 PCDHA7Q9UN72 937 aa14.81□□□□□ -0.04
HERC6-202ENST00000273960 EFCAB8A8MWE9 144 aa14.81□□□□□ -0.04
HERC6-202ENST00000273960 MYL6BP14649 208 aa14.81□□□□□ -0.04
HERC6-202ENST00000273960 SCRN1Q12765 414 aa14.81□□□□□ -0.04
HERC6-202ENST00000273960 SLC39A6Q13433 755 aa14.81□□□□□ -0.04
HERC6-202ENST00000273960 FAM212AQ96EL1 285 aa14.81□□□□□ -0.04
HERC6-202ENST00000273960 A0A0U1RQJ8 604 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms