RNA–Protein interactions for RNA: ENST00000273048.2

RETREG2-201, Transcript of reticulophagy regulator family member 2, humanhuman

TSL 1 (best)

Gene RETREG2, Length 2,533 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2-201ENST00000273048 KMT5BQ4FZB7 885 aa27.81■■■□□ 2.04
RETREG2-201ENST00000273048 AXIN2Q9Y2T1 843 aa27.81■■■□□ 2.04
RETREG2-201ENST00000273048 ARHGEF25Q86VW2 580 aa27.8■■■□□ 2.04
RETREG2-201ENST00000273048 CCAR2Q8N163 923 aaKnown RBP27.8■■■□□ 2.04
RETREG2-201ENST00000273048 CEP57L1Q8IYX8 460 aa27.8■■■□□ 2.04
RETREG2-201ENST00000273048 LAMA4Q16363 1823 aa27.8■■■□□ 2.04
RETREG2-201ENST00000273048 ZNF396Q96N95 335 aaPredicted RBP27.79■■■□□ 2.04
RETREG2-201ENST00000273048 ZNF771Q7L3S4 317 aaPredicted RBP27.79■■■□□ 2.04
RETREG2-201ENST00000273048 SIPA1L3O60292 1781 aaPredicted RBP27.78■■■□□ 2.04
RETREG2-201ENST00000273048 ATP5J2-PTCD1G3V325 749 aa27.78■■■□□ 2.04
RETREG2-201ENST00000273048 PTCD1O75127 700 aaKnown RBP27.78■■■□□ 2.04
RETREG2-201ENST00000273048 ANKRD13DQ6ZTN6 518 aa27.78■■■□□ 2.04
RETREG2-201ENST00000273048 NBPF11Q86T75 865 aa27.78■■■□□ 2.04
RETREG2-201ENST00000273048 MORC2Q9Y6X9 1032 aaPredicted RBP27.78■■■□□ 2.04
RETREG2-201ENST00000273048 A0A1B0GVL5 298 aa27.78■■■□□ 2.04
RETREG2-201ENST00000273048 EXOSC10Q01780 885 aaKnown RBP27.78■■■□□ 2.04
RETREG2-201ENST00000273048 KBTBD3Q8NAB2 608 aa27.78■■■□□ 2.04
RETREG2-201ENST00000273048 PCDHA7Q9UN72 937 aa27.78■■■□□ 2.04
RETREG2-201ENST00000273048 GOLIM4O00461 696 aa27.77■■■□□ 2.04
RETREG2-201ENST00000273048 HMGB1P09429 215 aaKnown RBP27.77■■■□□ 2.04
RETREG2-201ENST00000273048 ELF2Q15723 593 aa27.77■■■□□ 2.04
RETREG2-201ENST00000273048 RFX7Q2KHR2 1363 aa27.77■■■□□ 2.04
RETREG2-201ENST00000273048 C5P01031 1676 aa27.77■■■□□ 2.04
RETREG2-201ENST00000273048 SALL1Q9NSC2 1324 aa27.76■■■□□ 2.04
RETREG2-201ENST00000273048 ZNF397Q8NF99 534 aaPredicted RBP27.76■■■□□ 2.03
RETREG2-201ENST00000273048 NFATC2IPQ8NCF5 419 aa27.76■■■□□ 2.03
RETREG2-201ENST00000273048 SYTL4Q96C24 671 aaPredicted RBP27.76■■■□□ 2.03
RETREG2-201ENST00000273048 SDF4Q9BRK5 362 aa27.76■■■□□ 2.03
RETREG2-201ENST00000273048 SH3TC1Q8TE82 1336 aa27.75■■■□□ 2.03
RETREG2-201ENST00000273048 E7EWF7 191 aa27.75■■■□□ 2.03
RETREG2-201ENST00000273048 OTUD7BQ6GQQ9 843 aa27.75■■■□□ 2.03
RETREG2-201ENST00000273048 FMR1NBQ8N0W7 255 aaPredicted RBP27.75■■■□□ 2.03
RETREG2-201ENST00000273048 NPHP1O15259 732 aa27.75■■■□□ 2.03
RETREG2-201ENST00000273048 PDIA3P30101 505 aaKnown RBP27.75■■■□□ 2.03
RETREG2-201ENST00000273048 FBXO38Q6PIJ6 1188 aa27.75■■■□□ 2.03
RETREG2-201ENST00000273048 ZNF496Q96IT1 587 aaPredicted RBP27.75■■■□□ 2.03
RETREG2-201ENST00000273048 NEUROD6Q96NK8 337 aa27.75■■■□□ 2.03
RETREG2-201ENST00000273048 ERBB3P21860 1342 aa27.74■■■□□ 2.03
RETREG2-201ENST00000273048 MRPS27Q92552 414 aaKnown RBP27.74■■■□□ 2.03
RETREG2-201ENST00000273048 NDUFA8P51970 172 aa27.74■■■□□ 2.03
RETREG2-201ENST00000273048 DPCR1Q3MIW9 517 aa27.74■■■□□ 2.03
RETREG2-201ENST00000273048 RABL6Q3YEC7 729 aaPredicted RBP27.74■■■□□ 2.03
RETREG2-201ENST00000273048 A0A087WZG4 1122 aa27.73■■■□□ 2.03
RETREG2-201ENST00000273048 AGXT2Q9BYV1 514 aa27.73■■■□□ 2.03
RETREG2-201ENST00000273048 CARMIL3Q8ND23 1372 aa27.73■■■□□ 2.03
RETREG2-201ENST00000273048 FDPSP14324 419 aaKnown RBP27.73■■■□□ 2.03
RETREG2-201ENST00000273048 ERO1AQ96HE7 468 aa27.73■■■□□ 2.03
RETREG2-201ENST00000273048 NAT10Q9H0A0 1025 aaKnown RBP27.73■■■□□ 2.03
RETREG2-201ENST00000273048 GPHNQ9NQX3 736 aaPredicted RBP27.73■■■□□ 2.03
RETREG2-201ENST00000273048 PHRF1Q9P1Y6 1649 aaKnown RBP27.73■■■□□ 2.03
RETREG2-201ENST00000273048 GABPB1Q06547 395 aaPredicted RBP27.72■■■□□ 2.03
RETREG2-201ENST00000273048 LRP10Q7Z4F1 713 aa27.72■■■□□ 2.03
RETREG2-201ENST00000273048 SLC52A2Q9HAB3 445 aa27.72■■■□□ 2.03
RETREG2-201ENST00000273048 PAG1Q9NWQ8 432 aa27.72■■■□□ 2.03
RETREG2-201ENST00000273048 ATL3Q6DD88 541 aa27.72■■■□□ 2.03
RETREG2-201ENST00000273048 ZNF142P52746 1687 aaPredicted RBP27.72■■■□□ 2.03
RETREG2-201ENST00000273048 SMC2O95347 1197 aa27.71■■■□□ 2.03
RETREG2-201ENST00000273048 SLFN14P0C7P3 912 aa27.71■■■□□ 2.03
RETREG2-201ENST00000273048 HSPD1P10809 573 aaKnown RBP27.71■■■□□ 2.03
RETREG2-201ENST00000273048 TIMM10P62072 90 aa27.71■■■□□ 2.03
RETREG2-201ENST00000273048 E4F1Q66K89 784 aaPredicted RBP27.71■■■□□ 2.03
RETREG2-201ENST00000273048 TTLL5Q6EMB2 1281 aa27.71■■■□□ 2.03
RETREG2-201ENST00000273048 LMBR1LQ6UX01 489 aa27.71■■■□□ 2.03
RETREG2-201ENST00000273048 DSCC1Q9BVC3 393 aa27.71■■■□□ 2.03
RETREG2-201ENST00000273048 XPO4Q9C0E2 1151 aaKnown RBP27.71■■■□□ 2.03
RETREG2-201ENST00000273048 CLIC4Q9Y696 253 aa27.71■■■□□ 2.03
RETREG2-201ENST00000273048 GSDMDP57764 484 aa27.71■■■□□ 2.03
RETREG2-201ENST00000273048 BIN1O00499 593 aa27.7■■■□□ 2.03
RETREG2-201ENST00000273048 SLU7O95391 586 aaKnown RBP27.7■■■□□ 2.03
RETREG2-201ENST00000273048 POLR3DP05423 398 aaPredicted RBP27.7■■■□□ 2.03
RETREG2-201ENST00000273048 FMNL2Q96PY5 1086 aa27.7■■■□□ 2.03
RETREG2-201ENST00000273048 OSBPL5Q9H0X9 879 aaPredicted RBP27.7■■■□□ 2.03
RETREG2-201ENST00000273048 ADALQ6DHV7 355 aa27.7■■■□□ 2.02
RETREG2-201ENST00000273048 TMC6Q7Z403 805 aa27.7■■■□□ 2.02
RETREG2-201ENST00000273048 KRT222Q8N1A0 295 aa27.7■■■□□ 2.02
RETREG2-201ENST00000273048 HELLSQ9NRZ9 838 aa27.7■■■□□ 2.02
RETREG2-201ENST00000273048 IFNKQ9P0W0 207 aa27.7■■■□□ 2.02
RETREG2-201ENST00000273048 ARMCX5Q6P1M9 558 aa27.69■■■□□ 2.02
RETREG2-201ENST00000273048 RTEL1Q9NZ71 1219 aa27.69■■■□□ 2.02
RETREG2-201ENST00000273048 KIAA1468Q9P260 1216 aa27.69■■■□□ 2.02
RETREG2-201ENST00000273048 KDM6AO15550 1401 aaPredicted RBP27.69■■■□□ 2.02
RETREG2-201ENST00000273048 PALLDQ8WX93 1383 aa27.68■■■□□ 2.02
RETREG2-201ENST00000273048 ZMYM1Q5SVZ6 1142 aa27.68■■■□□ 2.02
RETREG2-201ENST00000273048 LRRN4CLQ8ND94 238 aa27.68■■■□□ 2.02
RETREG2-201ENST00000273048 SF3A1Q15459 793 aaKnown RBP27.68■■■□□ 2.02
RETREG2-201ENST00000273048 LINC00301Q8NCQ3 95 aa27.68■■■□□ 2.02
RETREG2-201ENST00000273048 ZNF274Q96GC6 653 aaPredicted RBP27.68■■■□□ 2.02
RETREG2-201ENST00000273048 KCND1Q9NSA2 647 aa27.68■■■□□ 2.02
RETREG2-201ENST00000273048 MAST3O60307 1309 aa27.67■■■□□ 2.02
RETREG2-201ENST00000273048 NEDD4P46934 1319 aa27.67■■■□□ 2.02
RETREG2-201ENST00000273048 STK38Q15208 465 aa27.67■■■□□ 2.02
RETREG2-201ENST00000273048 PPP1R13BQ96KQ4 1090 aa27.67■■■□□ 2.02
RETREG2-201ENST00000273048 GJB4Q9NTQ9 266 aa27.67■■■□□ 2.02
RETREG2-201ENST00000273048 AFDNP55196 1824 aaKnown RBP27.67■■■□□ 2.02
RETREG2-201ENST00000273048 ZRSR1Q15695 479 aaKnown RBP27.67■■■□□ 2.02
RETREG2-201ENST00000273048 ABCC6O95255 1503 aa27.66■■■□□ 2.02
RETREG2-201ENST00000273048 SYT10Q6XYQ8 523 aa27.66■■■□□ 2.02
RETREG2-201ENST00000273048 CASP7P55210 303 aa27.66■■■□□ 2.02
RETREG2-201ENST00000273048 ATG9AQ7Z3C6 839 aa27.66■■■□□ 2.02
RETREG2-201ENST00000273048 RAB11FIP4Q86YS3 637 aa27.66■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms