RNA–Protein interactions for RNA: ENST00000269217.10

LAMA3-201, Transcript of laminin subunit alpha 3, humanhuman

TSL 1 (best) BASIC

Gene LAMA3, Length 5,671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-201ENST00000269217 TRAF1Q13077 416 aa11.64□□□□□ -0.55
LAMA3-201ENST00000269217 SPAG5Q96R06 1193 aa11.64□□□□□ -0.55
LAMA3-201ENST00000269217 SHANK2Q9UPX8 1470 aa11.64□□□□□ -0.55
LAMA3-201ENST00000269217 COL17A1Q9UMD9 1497 aaPredicted RBP11.64□□□□□ -0.55
LAMA3-201ENST00000269217 DHX32Q7L7V1 743 aaKnown RBP11.64□□□□□ -0.55
LAMA3-201ENST00000269217 CARD14Q9BXL6 1004 aa11.64□□□□□ -0.55
LAMA3-201ENST00000269217 LIG1P18858 919 aa11.64□□□□□ -0.55
LAMA3-201ENST00000269217 SPECC1LQ69YQ0 1117 aa11.64□□□□□ -0.55
LAMA3-201ENST00000269217 ATL3Q6DD88 541 aa11.64□□□□□ -0.55
LAMA3-201ENST00000269217 NAA16Q6N069 864 aaPredicted RBP11.64□□□□□ -0.55
LAMA3-201ENST00000269217 FEZ1Q99689 392 aa11.64□□□□□ -0.55
LAMA3-201ENST00000269217 NBPF6Q5VWK0 638 aa11.64□□□□□ -0.55
LAMA3-201ENST00000269217 NBPF5PQ86XG9 351 aaPredicted RBP11.64□□□□□ -0.55
LAMA3-201ENST00000269217 BBXQ8WY36 941 aaPredicted RBP11.64□□□□□ -0.55
LAMA3-201ENST00000269217 NBPF4Q96M43 638 aa11.64□□□□□ -0.55
LAMA3-201ENST00000269217 A0A1W2PP64 1363 aa11.64□□□□□ -0.55
LAMA3-201ENST00000269217 PTPDC1A2A3K4 754 aa11.63□□□□□ -0.55
LAMA3-201ENST00000269217 CALML3P27482 149 aa11.63□□□□□ -0.55
LAMA3-201ENST00000269217 TBC1D5Q92609 795 aa11.63□□□□□ -0.55
LAMA3-201ENST00000269217 PLVAPQ9BX97 442 aa11.63□□□□□ -0.55
LAMA3-201ENST00000269217 ZRANB1Q9UGI0 708 aa11.63□□□□□ -0.55
LAMA3-201ENST00000269217 ZBTB7BO15156 539 aaPredicted RBP11.63□□□□□ -0.55
LAMA3-201ENST00000269217 LMOD1P29536 600 aaPredicted RBP11.63□□□□□ -0.55
LAMA3-201ENST00000269217 TUBB4BP68371 445 aa11.63□□□□□ -0.55
LAMA3-201ENST00000269217 GTPBP4Q9BZE4 634 aaKnown RBP11.63□□□□□ -0.55
LAMA3-201ENST00000269217 PER1O15534 1290 aaPredicted RBP11.63□□□□□ -0.55
LAMA3-201ENST00000269217 TACC1O75410 805 aa11.63□□□□□ -0.55
LAMA3-201ENST00000269217 SEC24BO95487 1268 aa11.63□□□□□ -0.55
LAMA3-201ENST00000269217 KIAA0753Q2KHM9 967 aa11.63□□□□□ -0.55
LAMA3-201ENST00000269217 SLC4A8Q2Y0W8 1093 aa11.63□□□□□ -0.55
LAMA3-201ENST00000269217 HSP90AA4PQ58FG1 418 aa11.63□□□□□ -0.55
LAMA3-201ENST00000269217 HEATR3Q7Z4Q2 680 aa11.63□□□□□ -0.55
LAMA3-201ENST00000269217 MSH6P52701 1360 aa11.63□□□□□ -0.55
LAMA3-201ENST00000269217 FSD2A1L4K1 749 aa11.63□□□□□ -0.55
LAMA3-201ENST00000269217 KRT83P78385 493 aa11.63□□□□□ -0.55
LAMA3-201ENST00000269217 APOBRQ0VD83 1088 aa11.63□□□□□ -0.55
LAMA3-201ENST00000269217 DHX58Q96C10 678 aa11.63□□□□□ -0.55
LAMA3-201ENST00000269217 PHACTR3Q96KR7 559 aa11.63□□□□□ -0.55
LAMA3-201ENST00000269217 UHRF1BP1Q6BDS2 1440 aa11.63□□□□□ -0.55
LAMA3-201ENST00000269217 NPC1L1Q9UHC9 1359 aa11.62□□□□□ -0.55
LAMA3-201ENST00000269217 CCDC174Q6PII3 467 aa11.62□□□□□ -0.55
LAMA3-201ENST00000269217 FERMT2Q96AC1 680 aa11.62□□□□□ -0.55
LAMA3-201ENST00000269217 CTAGE9A4FU28 777 aa11.62□□□□□ -0.55
LAMA3-201ENST00000269217 RFC4P35249 363 aa11.62□□□□□ -0.55
LAMA3-201ENST00000269217 ASIC1P78348 528 aa11.62□□□□□ -0.55
LAMA3-201ENST00000269217 DDX12PQ92771 950 aa11.62□□□□□ -0.55
LAMA3-201ENST00000269217 NGLY1Q96IV0 654 aa11.62□□□□□ -0.55
LAMA3-201ENST00000269217 SAMM50Q9Y512 469 aa11.62□□□□□ -0.55
LAMA3-201ENST00000269217 SELENOOQ9BVL4 669 aa11.62□□□□□ -0.55
LAMA3-201ENST00000269217 MAGEB6P1A0A0J9YX57 407 aa11.62□□□□□ -0.55
LAMA3-201ENST00000269217 ST5P78524 1137 aa11.62□□□□□ -0.55
LAMA3-201ENST00000269217 UBE4AQ14139 1066 aa11.62□□□□□ -0.55
LAMA3-201ENST00000269217 CWF19L2Q2TBE0 894 aaKnown RBP11.62□□□□□ -0.55
LAMA3-201ENST00000269217 GOLGA1Q92805 767 aa11.62□□□□□ -0.55
LAMA3-201ENST00000269217 ZMYM4Q5VZL5 1548 aa11.62□□□□□ -0.55
LAMA3-201ENST00000269217 KRT24Q2M2I5 525 aa11.62□□□□□ -0.55
LAMA3-201ENST00000269217 KRT2P35908 639 aa11.61□□□□□ -0.55
LAMA3-201ENST00000269217 NAPAP54920 295 aa11.61□□□□□ -0.55
LAMA3-201ENST00000269217 USP37Q86T82 979 aa11.61□□□□□ -0.55
LAMA3-201ENST00000269217 TRERF1Q96PN7 1200 aa11.61□□□□□ -0.55
LAMA3-201ENST00000269217 KRT86O43790 486 aa11.61□□□□□ -0.55
LAMA3-201ENST00000269217 STAMBPO95630 424 aa11.61□□□□□ -0.55
LAMA3-201ENST00000269217 TFCP2Q12800 502 aa11.61□□□□□ -0.55
LAMA3-201ENST00000269217 CCDC155Q8N6L0 562 aa11.61□□□□□ -0.55
LAMA3-201ENST00000269217 C6orf50Q9HD87 102 aa11.61□□□□□ -0.55
LAMA3-201ENST00000269217 PRPHP41219 470 aa11.61□□□□□ -0.55
LAMA3-201ENST00000269217 ASXL2Q76L83 1435 aa11.61□□□□□ -0.55
LAMA3-201ENST00000269217 TRAPPC8Q9Y2L5 1435 aa11.61□□□□□ -0.55
LAMA3-201ENST00000269217 PTGS1P23219 599 aa11.61□□□□□ -0.55
LAMA3-201ENST00000269217 NLRP3Q96P20 1036 aa11.61□□□□□ -0.55
LAMA3-201ENST00000269217 RNF216Q9NWF9 866 aaPredicted RBP11.61□□□□□ -0.55
LAMA3-201ENST00000269217 BICDL2A1A5D9 508 aa11.6□□□□□ -0.55
LAMA3-201ENST00000269217 EYA1Q99502 592 aa11.6□□□□□ -0.55
LAMA3-201ENST00000269217 UTP14AQ9BVJ6 771 aaKnown RBP11.6□□□□□ -0.55
LAMA3-201ENST00000269217 HELLSQ9NRZ9 838 aa11.6□□□□□ -0.55
LAMA3-201ENST00000269217 IVLP07476 585 aa11.6□□□□□ -0.55
LAMA3-201ENST00000269217 IQSEC3Q9UPP2 1182 aaPredicted RBP11.6□□□□□ -0.55
LAMA3-201ENST00000269217 TRPM2O94759 1503 aa11.6□□□□□ -0.55
LAMA3-201ENST00000269217 OPA1O60313 960 aa11.6□□□□□ -0.55
LAMA3-201ENST00000269217 KIF5AQ12840 1032 aa11.6□□□□□ -0.55
LAMA3-201ENST00000269217 TIGD1Q96MW7 591 aa11.6□□□□□ -0.55
LAMA3-201ENST00000269217 AOX1Q06278 1338 aa11.6□□□□□ -0.55
LAMA3-201ENST00000269217 KRT13P13646 458 aa11.6□□□□□ -0.55
LAMA3-201ENST00000269217 SETDB2Q96T68 719 aa11.6□□□□□ -0.55
LAMA3-201ENST00000269217 BABAM1Q9NWV8 329 aa11.6□□□□□ -0.55
LAMA3-201ENST00000269217 IFNKQ9P0W0 207 aa11.6□□□□□ -0.55
LAMA3-201ENST00000269217 WDR62O43379 1518 aa11.6□□□□□ -0.55
LAMA3-201ENST00000269217 MCM6Q14566 821 aa11.6□□□□□ -0.55
LAMA3-201ENST00000269217 KIAA0556O60303 1618 aa11.59□□□□□ -0.55
LAMA3-201ENST00000269217 CHST3Q7LGC8 479 aa11.59□□□□□ -0.55
LAMA3-201ENST00000269217 NFATC2IPQ8NCF5 419 aa11.59□□□□□ -0.55
LAMA3-201ENST00000269217 LRRC59Q96AG4 307 aaKnown RBP11.59□□□□□ -0.55
LAMA3-201ENST00000269217 BICC1Q9H694 974 aaKnown RBP11.59□□□□□ -0.55
LAMA3-201ENST00000269217 RASAL2Q9UJF2 1139 aa11.59□□□□□ -0.55
LAMA3-201ENST00000269217 ZHX1Q9UKY1 873 aaPredicted RBP11.59□□□□□ -0.55
LAMA3-201ENST00000269217 NF2P35240 595 aa11.59□□□□□ -0.55
LAMA3-201ENST00000269217 ATP6V1AP38606 617 aa11.59□□□□□ -0.55
LAMA3-201ENST00000269217 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.59□□□□□ -0.55
LAMA3-201ENST00000269217 ABCC10Q5T3U5 1492 aa11.59□□□□□ -0.55
LAMA3-201ENST00000269217 ACTN2P35609 894 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms