RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 KLRG2A4D1S0 409 aaPredicted RBP18.56■□□□□ 0.56
COPS3-201ENST00000268717 SRGNP10124 158 aa18.56■□□□□ 0.56
COPS3-201ENST00000268717 GTF2E1P29083 439 aaPredicted RBP18.56■□□□□ 0.56
COPS3-201ENST00000268717 METTL24Q5JXM2 366 aa18.56■□□□□ 0.56
COPS3-201ENST00000268717 ZNF622Q969S3 477 aaKnown RBP eCLIP18.56■□□□□ 0.56
COPS3-201ENST00000268717 NEUROD6Q96NK8 337 aa18.56■□□□□ 0.56
COPS3-201ENST00000268717 SLX4Q8IY92 1834 aa18.56■□□□□ 0.56
COPS3-201ENST00000268717 SPEF2Q9C093 1822 aa18.56■□□□□ 0.56
COPS3-201ENST00000268717 TIMM10P62072 90 aa18.56■□□□□ 0.56
COPS3-201ENST00000268717 ZNF512BQ96KM6 892 aaPredicted RBP18.56■□□□□ 0.56
COPS3-201ENST00000268717 FSD1Q9BTV5 496 aa18.56■□□□□ 0.56
COPS3-201ENST00000268717 PDE8BO95263 885 aa18.55■□□□□ 0.56
COPS3-201ENST00000268717 ATP2B3Q16720 1220 aa18.55■□□□□ 0.56
COPS3-201ENST00000268717 CCDC158Q5M9N0 1113 aa18.55■□□□□ 0.56
COPS3-201ENST00000268717 STYK1Q6J9G0 422 aa18.55■□□□□ 0.56
COPS3-201ENST00000268717 MASTLQ96GX5 879 aa18.55■□□□□ 0.56
COPS3-201ENST00000268717 CDC5LQ99459 802 aaKnown RBP18.55■□□□□ 0.56
COPS3-201ENST00000268717 SLC4A3P48751 1232 aa18.54■□□□□ 0.56
COPS3-201ENST00000268717 ERFEQ4G0M1 354 aa18.54■□□□□ 0.56
COPS3-201ENST00000268717 CWC27Q6UX04 472 aaKnown RBP18.54■□□□□ 0.56
COPS3-201ENST00000268717 KIAA1211Q6ZU35 1233 aa18.54■□□□□ 0.56
COPS3-201ENST00000268717 LSG1Q9H089 658 aaKnown RBP18.54■□□□□ 0.56
COPS3-201ENST00000268717 IGHMBP2P38935 993 aaKnown RBP18.53■□□□□ 0.56
COPS3-201ENST00000268717 KBTBD3Q8NAB2 608 aa18.53■□□□□ 0.56
COPS3-201ENST00000268717 CNKSR1Q969H4 720 aa18.53■□□□□ 0.56
COPS3-201ENST00000268717 XAGE2Q96GT9 111 aa18.53■□□□□ 0.56
COPS3-201ENST00000268717 IL25Q9H293 177 aa18.53■□□□□ 0.56
COPS3-201ENST00000268717 HSPA4P34932 840 aa18.52■□□□□ 0.56
COPS3-201ENST00000268717 PUM3Q15397 648 aaKnown RBP18.52■□□□□ 0.56
COPS3-201ENST00000268717 MPHOSPH8Q99549 860 aa18.52■□□□□ 0.56
COPS3-201ENST00000268717 FER1L6Q2WGJ9 1857 aa18.52■□□□□ 0.56
COPS3-201ENST00000268717 CCDC88AQ3V6T2 1871 aa18.52■□□□□ 0.56
COPS3-201ENST00000268717 MED23Q9ULK4 1368 aa18.52■□□□□ 0.56
COPS3-201ENST00000268717 IFIT1P09914 478 aaKnown RBP18.52■□□□□ 0.55
COPS3-201ENST00000268717 NPR1P16066 1061 aa18.52■□□□□ 0.55
COPS3-201ENST00000268717 FGFR2P21802 821 aa18.52■□□□□ 0.55
COPS3-201ENST00000268717 LPIN2Q92539 896 aa18.52■□□□□ 0.55
COPS3-201ENST00000268717 PAG1Q9NWQ8 432 aa18.52■□□□□ 0.55
COPS3-201ENST00000268717 NMIQ13287 307 aaPredicted RBP18.51■□□□□ 0.55
COPS3-201ENST00000268717 LRRFIP1Q32MZ4 808 aaKnown RBP18.51■□□□□ 0.55
COPS3-201ENST00000268717 CRY2Q49AN0 593 aa18.51■□□□□ 0.55
COPS3-201ENST00000268717 TTC39AQ5SRH9 613 aa18.51■□□□□ 0.55
COPS3-201ENST00000268717 GORABQ5T7V8 394 aa18.51■□□□□ 0.55
COPS3-201ENST00000268717 ST18O60284 1047 aa18.5■□□□□ 0.55
COPS3-201ENST00000268717 PRPF40BQ6NWY9 871 aaKnown RBP18.5■□□□□ 0.55
COPS3-201ENST00000268717 DNAJC2Q99543 621 aaKnown RBP18.5■□□□□ 0.55
COPS3-201ENST00000268717 SEC31BQ9NQW1 1179 aa18.5■□□□□ 0.55
COPS3-201ENST00000268717 K7ELQ4 463 aaPredicted RBP18.49■□□□□ 0.55
COPS3-201ENST00000268717 CCDC171Q6TFL3 1326 aa18.49■□□□□ 0.55
COPS3-201ENST00000268717 C21orf2O43822 256 aa18.49■□□□□ 0.55
COPS3-201ENST00000268717 ADORA1P30542 326 aa18.49■□□□□ 0.55
COPS3-201ENST00000268717 C3orf67Q6ZVT6 689 aa18.49■□□□□ 0.55
COPS3-201ENST00000268717 KCNB2Q92953 911 aa18.49■□□□□ 0.55
COPS3-201ENST00000268717 NLRP3Q96P20 1036 aa18.49■□□□□ 0.55
COPS3-201ENST00000268717 BSDC1Q9NW68 430 aaPredicted RBP18.49■□□□□ 0.55
COPS3-201ENST00000268717 ARAP2Q8WZ64 1704 aa18.48■□□□□ 0.55
COPS3-201ENST00000268717 A0A0D9SFI3 127 aa18.48■□□□□ 0.55
COPS3-201ENST00000268717 UQCRFS1P1P0C7P4 283 aa18.48■□□□□ 0.55
COPS3-201ENST00000268717 SLC5A1P13866 664 aa18.48■□□□□ 0.55
COPS3-201ENST00000268717 ARID4AP29374 1257 aaPredicted RBP18.48■□□□□ 0.55
COPS3-201ENST00000268717 RASSF7Q02833 373 aa18.48■□□□□ 0.55
COPS3-201ENST00000268717 C9orf131Q5VYM1 1079 aa18.48■□□□□ 0.55
COPS3-201ENST00000268717 ANKRD18AQ8IVF6 992 aa18.48■□□□□ 0.55
COPS3-201ENST00000268717 EDC3Q96F86 508 aaKnown RBP18.48■□□□□ 0.55
COPS3-201ENST00000268717 FAM227BQ96M60 508 aa18.48■□□□□ 0.55
COPS3-201ENST00000268717 ZNF219Q9P2Y4 722 aaPredicted RBP18.48■□□□□ 0.55
COPS3-201ENST00000268717 GOLIM4O00461 696 aa18.47■□□□□ 0.55
COPS3-201ENST00000268717 ALDH1B1P30837 517 aa18.47■□□□□ 0.55
COPS3-201ENST00000268717 MCM2P49736 904 aa18.47■□□□□ 0.55
COPS3-201ENST00000268717 MAP4K1Q92918 833 aa18.47■□□□□ 0.55
COPS3-201ENST00000268717 HELLSQ9NRZ9 838 aa18.47■□□□□ 0.55
COPS3-201ENST00000268717 DICER1Q9UPY3 1922 aaKnown RBP18.46■□□□□ 0.55
COPS3-201ENST00000268717 NFKBIEO00221 500 aa18.46■□□□□ 0.55
COPS3-201ENST00000268717 ZFYP08048 801 aaPredicted RBP18.46■□□□□ 0.55
COPS3-201ENST00000268717 HOXA10P31260 410 aaPredicted RBP18.46■□□□□ 0.55
COPS3-201ENST00000268717 DDX46Q7L014 1031 aaKnown RBP18.46■□□□□ 0.55
COPS3-201ENST00000268717 C7orf43Q8WVR3 580 aa18.46■□□□□ 0.55
COPS3-201ENST00000268717 ANTXR1Q9H6X2 564 aa18.46■□□□□ 0.55
COPS3-201ENST00000268717 COL4A1P02462 1669 aa18.46■□□□□ 0.55
COPS3-201ENST00000268717 SOGA3Q5TF21 947 aa18.45■□□□□ 0.54
COPS3-201ENST00000268717 RPGRQ92834 1020 aaKnown RBP18.45■□□□□ 0.54
COPS3-201ENST00000268717 PALD1Q9ULE6 856 aa18.45■□□□□ 0.54
COPS3-201ENST00000268717 TTF1Q15361 905 aaPredicted RBP18.45■□□□□ 0.54
COPS3-201ENST00000268717 MCMDC2Q4G0Z9 681 aa18.45■□□□□ 0.54
COPS3-201ENST00000268717 RNF181Q9P0P0 153 aa18.45■□□□□ 0.54
COPS3-201ENST00000268717 CD2BP2O95400 341 aaKnown RBP18.44■□□□□ 0.54
COPS3-201ENST00000268717 LMNB1P20700 586 aa18.44■□□□□ 0.54
COPS3-201ENST00000268717 PRELPP51888 382 aa18.44■□□□□ 0.54
COPS3-201ENST00000268717 CHRNDQ07001 517 aa18.44■□□□□ 0.54
COPS3-201ENST00000268717 NECTIN1Q15223 517 aa18.44■□□□□ 0.54
COPS3-201ENST00000268717 ZMYM1Q5SVZ6 1142 aa18.44■□□□□ 0.54
COPS3-201ENST00000268717 CCDC102BQ68D86 513 aa18.44■□□□□ 0.54
COPS3-201ENST00000268717 NDUFB9Q9Y6M9 179 aa18.44■□□□□ 0.54
COPS3-201ENST00000268717 TAF1P21675 1872 aa18.43■□□□□ 0.54
COPS3-201ENST00000268717 RNF113AO15541 343 aaKnown RBP18.43■□□□□ 0.54
COPS3-201ENST00000268717 TAF5LO75529 589 aa18.43■□□□□ 0.54
COPS3-201ENST00000268717 PTH1RQ03431 593 aa18.43■□□□□ 0.54
COPS3-201ENST00000268717 UBE4AQ14139 1066 aa18.43■□□□□ 0.54
COPS3-201ENST00000268717 ANP32EQ9BTT0 268 aa18.43■□□□□ 0.54
COPS3-201ENST00000268717 TM6SF1Q9BZW5 370 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 111.1 ms