RNA–Protein interactions for RNA: ENST00000263834.9

GREB1-202, Transcript of growth regulating estrogen receptor binding 1, humanhuman

TSL 1 (best) BASIC

Gene GREB1, Length 2,448 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GREB1-202ENST00000263834 SOGA3Q5TF21 947 aa12.36□□□□□ -0.43
GREB1-202ENST00000263834 LMBR1LQ6UX01 489 aa12.36□□□□□ -0.43
GREB1-202ENST00000263834 FOXD4L3Q6VB84 417 aaPredicted RBP12.36□□□□□ -0.43
GREB1-202ENST00000263834 CELF1Q92879 486 aaKnown RBP12.36□□□□□ -0.43
GREB1-202ENST00000263834 HDAC5Q9UQL6 1122 aa12.36□□□□□ -0.43
GREB1-202ENST00000263834 CSF1RP07333 972 aa12.35□□□□□ -0.43
GREB1-202ENST00000263834 GNAI3P08754 354 aa12.35□□□□□ -0.43
GREB1-202ENST00000263834 ITGA6P23229 1130 aa12.35□□□□□ -0.43
GREB1-202ENST00000263834 RPS8P62241 208 aaKnown RBP12.35□□□□□ -0.43
GREB1-202ENST00000263834 KLHL40Q2TBA0 621 aa12.35□□□□□ -0.43
GREB1-202ENST00000263834 OLFM4Q6UX06 510 aa12.35□□□□□ -0.43
GREB1-202ENST00000263834 CDC5LQ99459 802 aaKnown RBP12.35□□□□□ -0.43
GREB1-202ENST00000263834 BICC1Q9H694 974 aaKnown RBP12.35□□□□□ -0.43
GREB1-202ENST00000263834 LAMB2P55268 1798 aa12.35□□□□□ -0.43
GREB1-202ENST00000263834 SLX4Q8IY92 1834 aa12.35□□□□□ -0.43
GREB1-202ENST00000263834 C7orf43Q8WVR3 580 aa12.35□□□□□ -0.43
GREB1-202ENST00000263834 IFIT5Q13325 482 aaKnown RBP12.34□□□□□ -0.43
GREB1-202ENST00000263834 CCDC57Q2TAC2 916 aa12.34□□□□□ -0.43
GREB1-202ENST00000263834 ZSCAN23Q3MJ62 389 aa12.34□□□□□ -0.43
GREB1-202ENST00000263834 CCDC93Q567U6 631 aa12.34□□□□□ -0.43
GREB1-202ENST00000263834 ANKRD18AQ8IVF6 992 aa12.34□□□□□ -0.43
GREB1-202ENST00000263834 KAZALD1Q96I82 304 aa12.34□□□□□ -0.43
GREB1-202ENST00000263834 LMBRD1Q9NUN5 540 aa12.34□□□□□ -0.43
GREB1-202ENST00000263834 ISY1Q9ULR0 285 aaKnown RBP12.34□□□□□ -0.43
GREB1-202ENST00000263834 EXOC6BQ9Y2D4 811 aa12.34□□□□□ -0.43
GREB1-202ENST00000263834 ANKRD18BA2A2Z9 1011 aa12.33□□□□□ -0.43
GREB1-202ENST00000263834 KCNA4P22459 653 aa12.33□□□□□ -0.43
GREB1-202ENST00000263834 TMC4Q7Z404 712 aa12.33□□□□□ -0.43
GREB1-202ENST00000263834 NSFL1CQ9UNZ2 370 aaKnown RBP12.33□□□□□ -0.43
GREB1-202ENST00000263834 ZDHHC9Q9Y397 364 aa12.33□□□□□ -0.43
GREB1-202ENST00000263834 ATP6V0A2Q9Y487 856 aa12.33□□□□□ -0.43
GREB1-202ENST00000263834 IGHMBP2P38935 993 aaKnown RBP12.33□□□□□ -0.44
GREB1-202ENST00000263834 CC2D2BQ6DHV5 1058 aa12.33□□□□□ -0.44
GREB1-202ENST00000263834 RTKN2Q8IZC4 609 aa12.33□□□□□ -0.44
GREB1-202ENST00000263834 RBSNQ9H1K0 784 aa12.33□□□□□ -0.44
GREB1-202ENST00000263834 LRRFIP2Q9Y608 721 aaKnown RBP12.33□□□□□ -0.44
GREB1-202ENST00000263834 RTL9Q8NET4 1388 aa12.32□□□□□ -0.44
GREB1-202ENST00000263834 CHRM1P11229 460 aaPredicted RBP12.32□□□□□ -0.44
GREB1-202ENST00000263834 SP8Q8IXZ3 490 aa12.32□□□□□ -0.44
GREB1-202ENST00000263834 GPT2Q8TD30 523 aa12.32□□□□□ -0.44
GREB1-202ENST00000263834 MPHOSPH8Q99549 860 aa12.32□□□□□ -0.44
GREB1-202ENST00000263834 ARFGEF1Q9Y6D6 1849 aa12.32□□□□□ -0.44
GREB1-202ENST00000263834 SLC51AQ86UW1 340 aa12.32□□□□□ -0.44
GREB1-202ENST00000263834 TAOK3Q9H2K8 898 aa12.32□□□□□ -0.44
GREB1-202ENST00000263834 MYH3P11055 1940 aa12.31□□□□□ -0.44
GREB1-202ENST00000263834 GNAI2P04899 355 aa12.31□□□□□ -0.44
GREB1-202ENST00000263834 RASSF7Q02833 373 aa12.31□□□□□ -0.44
GREB1-202ENST00000263834 CCDC173Q0VFZ6 552 aa12.31□□□□□ -0.44
GREB1-202ENST00000263834 RABL6Q3YEC7 729 aaPredicted RBP12.31□□□□□ -0.44
GREB1-202ENST00000263834 TAF1P21675 1872 aa12.31□□□□□ -0.44
GREB1-202ENST00000263834 NFKBIEO00221 500 aa12.31□□□□□ -0.44
GREB1-202ENST00000263834 ST18O60284 1047 aa12.31□□□□□ -0.44
GREB1-202ENST00000263834 CYP2E1P05181 493 aaPredicted RBP12.31□□□□□ -0.44
GREB1-202ENST00000263834 NEK4P51957 841 aa12.31□□□□□ -0.44
GREB1-202ENST00000263834 NUCB2P80303 420 aa12.31□□□□□ -0.44
GREB1-202ENST00000263834 GRIPAP1Q4V328 841 aa12.31□□□□□ -0.44
GREB1-202ENST00000263834 CASC1Q6TDU7 716 aa12.31□□□□□ -0.44
GREB1-202ENST00000263834 RPAP2Q8IXW5 612 aaPredicted RBP12.31□□□□□ -0.44
GREB1-202ENST00000263834 ANP32BQ92688 251 aaKnown RBP12.31□□□□□ -0.44
GREB1-202ENST00000263834 PTMSP20962 102 aa12.3□□□□□ -0.44
GREB1-202ENST00000263834 DPP8Q6V1X1 898 aaPredicted RBP12.3□□□□□ -0.44
GREB1-202ENST00000263834 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.3□□□□□ -0.44
GREB1-202ENST00000263834 MPNDQ8N594 471 aa12.3□□□□□ -0.44
GREB1-202ENST00000263834 BSDC1Q9NW68 430 aaPredicted RBP12.3□□□□□ -0.44
GREB1-202ENST00000263834 ANKIB1Q9P2G1 1089 aa12.3□□□□□ -0.44
GREB1-202ENST00000263834 FKBP4Q02790 459 aaKnown RBP eCLIP12.3□□□□□ -0.446e-6■■□□□ 13.4
GREB1-202ENST00000263834 CLEC17AQ6ZS10 378 aa12.3□□□□□ -0.44
GREB1-202ENST00000263834 KIAA1211Q6ZU35 1233 aa12.3□□□□□ -0.44
GREB1-202ENST00000263834 RNF214Q8ND24 703 aa12.3□□□□□ -0.44
GREB1-202ENST00000263834 ZNF594Q96JF6 807 aaPredicted RBP12.3□□□□□ -0.44
GREB1-202ENST00000263834 SYCE3A1L190 88 aa12.29□□□□□ -0.44
GREB1-202ENST00000263834 ERC2O15083 957 aa12.29□□□□□ -0.44
GREB1-202ENST00000263834 PDE1AP54750 535 aa12.29□□□□□ -0.44
GREB1-202ENST00000263834 LDHAL6AQ6ZMR3 332 aa12.29□□□□□ -0.44
GREB1-202ENST00000263834 RILPL2Q969X0 211 aa12.29□□□□□ -0.44
GREB1-202ENST00000263834 PALD1Q9ULE6 856 aa12.29□□□□□ -0.44
GREB1-202ENST00000263834 DTNBO60941 627 aa12.29□□□□□ -0.44
GREB1-202ENST00000263834 LMNB1P20700 586 aa12.29□□□□□ -0.44
GREB1-202ENST00000263834 PPP1R9BQ96SB3 815 aa12.29□□□□□ -0.44
GREB1-202ENST00000263834 PSMD1Q99460 953 aa12.29□□□□□ -0.44
GREB1-202ENST00000263834 CNNM1Q9NRU3 951 aa12.29□□□□□ -0.44
GREB1-202ENST00000263834 TMEM63CQ9P1W3 806 aa12.29□□□□□ -0.44
GREB1-202ENST00000263834 COL4A1P02462 1669 aa12.29□□□□□ -0.44
GREB1-202ENST00000263834 TRIM6-TRIM34B2RNG4 842 aa12.28□□□□□ -0.44
GREB1-202ENST00000263834 REC8O95072 547 aa12.28□□□□□ -0.44
GREB1-202ENST00000263834 C9orf131Q5VYM1 1079 aa12.28□□□□□ -0.44
GREB1-202ENST00000263834 ZNF277Q9NRM2 450 aaPredicted RBP12.28□□□□□ -0.44
GREB1-202ENST00000263834 RNF181Q9P0P0 153 aa12.28□□□□□ -0.44
GREB1-202ENST00000263834 MINPP1Q9UNW1 487 aa12.28□□□□□ -0.44
GREB1-202ENST00000263834 LTBP3Q9NS15 1303 aa12.28□□□□□ -0.44
GREB1-202ENST00000263834 SRGAP3O43295 1099 aa12.28□□□□□ -0.44
GREB1-202ENST00000263834 MSNP26038 577 aaKnown RBP12.28□□□□□ -0.44
GREB1-202ENST00000263834 GPSM2P81274 684 aa12.28□□□□□ -0.44
GREB1-202ENST00000263834 ZSCAN30Q86W11 494 aa12.28□□□□□ -0.44
GREB1-202ENST00000263834 KLHDC4Q8TBB5 520 aa12.28□□□□□ -0.44
GREB1-202ENST00000263834 TMX3Q96JJ7 454 aa12.28□□□□□ -0.44
GREB1-202ENST00000263834 GDPD2Q9HCC8 539 aa12.28□□□□□ -0.44
GREB1-202ENST00000263834 PRDM4Q9UKN5 801 aa12.28□□□□□ -0.44
GREB1-202ENST00000263834 CHD4Q14839 1912 aa12.27□□□□□ -0.44
GREB1-202ENST00000263834 PNMA6EA0A0J9YXQ4 647 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms