RNA–Protein interactions for RNA: ENST00000261799.8

PDGFRB-201, Transcript of platelet derived growth factor receptor beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRB, Length 5,717 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-201ENST00000261799 SULF1Q8IWU6 871 aa15.54■□□□□ 0.08
PDGFRB-201ENST00000261799 NOP56O00567 594 aaKnown RBP15.54■□□□□ 0.08
PDGFRB-201ENST00000261799 TDRD12Q587J7 1177 aaKnown RBP15.54■□□□□ 0.08
PDGFRB-201ENST00000261799 MMRN2Q9H8L6 949 aa15.54■□□□□ 0.08
PDGFRB-201ENST00000261799 EDC4Q6P2E9 1401 aaKnown RBP15.53■□□□□ 0.08
PDGFRB-201ENST00000261799 ARHGAP29Q52LW3 1261 aa15.53■□□□□ 0.08
PDGFRB-201ENST00000261799 TAX1BP1Q86VP1 789 aa15.53■□□□□ 0.08
PDGFRB-201ENST00000261799 ERVV-2B6SEH9 535 aa15.53■□□□□ 0.08
PDGFRB-201ENST00000261799 FAM13AO94988 1023 aa15.53■□□□□ 0.08
PDGFRB-201ENST00000261799 SPOUT1Q5T280 376 aaKnown RBP15.53■□□□□ 0.08
PDGFRB-201ENST00000261799 CCDC191Q8NCU4 936 aa15.53■□□□□ 0.08
PDGFRB-201ENST00000261799 FAM212AQ96EL1 285 aa15.53■□□□□ 0.08
PDGFRB-201ENST00000261799 RBM28Q9NW13 759 aaKnown RBP15.53■□□□□ 0.08
PDGFRB-201ENST00000261799 ZBTB21Q9ULJ3 1066 aa15.53■□□□□ 0.08
PDGFRB-201ENST00000261799 CTAGE5O15320 804 aa15.53■□□□□ 0.08
PDGFRB-201ENST00000261799 LMAN1P49257 510 aa15.53■□□□□ 0.08
PDGFRB-201ENST00000261799 GRIPAP1Q4V328 841 aa15.53■□□□□ 0.08
PDGFRB-201ENST00000261799 ZNF771Q7L3S4 317 aaPredicted RBP15.53■□□□□ 0.08
PDGFRB-201ENST00000261799 RAB11FIP4Q86YS3 637 aa15.53■□□□□ 0.08
PDGFRB-201ENST00000261799 NLGN1Q8N2Q7 840 aa15.53■□□□□ 0.08
PDGFRB-201ENST00000261799 CALML3P27482 149 aa15.53■□□□□ 0.08
PDGFRB-201ENST00000261799 MAP3K19Q56UN5 1328 aa15.53■□□□□ 0.08
PDGFRB-201ENST00000261799 HCLS1P14317 486 aaPredicted RBP15.52■□□□□ 0.08
PDGFRB-201ENST00000261799 GNA11P29992 359 aa15.52■□□□□ 0.08
PDGFRB-201ENST00000261799 BMS1Q14692 1282 aaKnown RBP15.52■□□□□ 0.08
PDGFRB-201ENST00000261799 TBC1D22AQ8WUA7 517 aa15.52■□□□□ 0.08
PDGFRB-201ENST00000261799 MACROD2A1Z1Q3 448 aa15.52■□□□□ 0.08
PDGFRB-201ENST00000261799 YEATS4O95619 227 aa15.52■□□□□ 0.08
PDGFRB-201ENST00000261799 DCAF15Q66K64 600 aa15.52■□□□□ 0.08
PDGFRB-201ENST00000261799 USO1O60763 962 aaKnown RBP15.52■□□□□ 0.07
PDGFRB-201ENST00000261799 ERLIN1O75477 346 aa15.52■□□□□ 0.07
PDGFRB-201ENST00000261799 STAT6P42226 847 aa15.52■□□□□ 0.07
PDGFRB-201ENST00000261799 ATP8B2P98198 1209 aa15.52■□□□□ 0.07
PDGFRB-201ENST00000261799 SP4Q02446 784 aa15.52■□□□□ 0.07
PDGFRB-201ENST00000261799 CIZ1Q9ULV3 898 aaPredicted RBP15.52■□□□□ 0.07
PDGFRB-201ENST00000261799 TFCP2Q12800 502 aa15.52■□□□□ 0.07
PDGFRB-201ENST00000261799 NUP88Q99567 741 aaPredicted RBP15.51■□□□□ 0.07
PDGFRB-201ENST00000261799 CAMK4Q16566 473 aa15.51■□□□□ 0.07
PDGFRB-201ENST00000261799 BABAM1Q9NWV8 329 aa15.51■□□□□ 0.07
PDGFRB-201ENST00000261799 PRAG1Q86YV5 1406 aa15.51■□□□□ 0.07
PDGFRB-201ENST00000261799 TRIM37O94972 964 aa15.51■□□□□ 0.07
PDGFRB-201ENST00000261799 TMEM94Q12767 1356 aa15.51■□□□□ 0.07
PDGFRB-201ENST00000261799 TTC12Q9H892 705 aaPredicted RBP15.51■□□□□ 0.07
PDGFRB-201ENST00000261799 DDX21Q9NR30 783 aaKnown RBP eCLIP15.51■□□□□ 0.07
PDGFRB-201ENST00000261799 DKC1O60832 514 aaKnown RBP eCLIP15.5■□□□□ 0.07
PDGFRB-201ENST00000261799 MSANTD4Q8NCY6 345 aa15.5■□□□□ 0.07
PDGFRB-201ENST00000261799 TSNARE1Q96NA8 513 aa15.5■□□□□ 0.07
PDGFRB-201ENST00000261799 A0A1W2PP64 1363 aa15.5■□□□□ 0.07
PDGFRB-201ENST00000261799 RBM25P49756 843 aaKnown RBP15.5■□□□□ 0.07
PDGFRB-201ENST00000261799 ZBTB24O43167 697 aaPredicted RBP15.5■□□□□ 0.07
PDGFRB-201ENST00000261799 FAM177A1Q8N128 213 aaPredicted RBP15.5■□□□□ 0.07
PDGFRB-201ENST00000261799 PTPDC1A2A3K4 754 aa15.5■□□□□ 0.07
PDGFRB-201ENST00000261799 FAM89AQ96GI7 184 aa15.5■□□□□ 0.07
PDGFRB-201ENST00000261799 ACTN2P35609 894 aa15.49■□□□□ 0.07
PDGFRB-201ENST00000261799 CENPHQ9H3R5 247 aa15.49■□□□□ 0.07
PDGFRB-201ENST00000261799 KRT2P35908 639 aa15.49■□□□□ 0.07
PDGFRB-201ENST00000261799 CWF19L2Q2TBE0 894 aaKnown RBP15.49■□□□□ 0.07
PDGFRB-201ENST00000261799 ALG1Q9BT22 464 aa15.49■□□□□ 0.07
PDGFRB-201ENST00000261799 METTL22Q9BUU2 404 aaPredicted RBP15.49■□□□□ 0.07
PDGFRB-201ENST00000261799 GJB2P29033 226 aa15.49■□□□□ 0.07
PDGFRB-201ENST00000261799 IL27Q8NEV9 243 aa15.49■□□□□ 0.07
PDGFRB-201ENST00000261799 PRKAG2Q9UGJ0 569 aa15.49■□□□□ 0.07
PDGFRB-201ENST00000261799 NOP2P46087 812 aaKnown RBP15.49■□□□□ 0.07
PDGFRB-201ENST00000261799 KRT79Q5XKE5 535 aa15.49■□□□□ 0.07
PDGFRB-201ENST00000261799 MRPL50Q8N5N7 158 aaKnown RBP15.49■□□□□ 0.07
PDGFRB-201ENST00000261799 FSIP1Q8NA03 581 aa15.49■□□□□ 0.07
PDGFRB-201ENST00000261799 MROH5Q6ZUA9 1318 aa15.49■□□□□ 0.07
PDGFRB-201ENST00000261799 GSTTP1A0A1W2PQM5 241 aa15.48■□□□□ 0.07
PDGFRB-201ENST00000261799 AZI2Q9H6S1 392 aa15.48■□□□□ 0.07
PDGFRB-201ENST00000261799 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.48■□□□□ 0.07
PDGFRB-201ENST00000261799 TTC22Q5TAA0 569 aa15.48■□□□□ 0.07
PDGFRB-201ENST00000261799 MAP7D2Q96T17 732 aa15.48■□□□□ 0.07
PDGFRB-201ENST00000261799 PSMD1Q99460 953 aa15.48■□□□□ 0.07
PDGFRB-201ENST00000261799 ZMYND15Q9H091 742 aa15.48■□□□□ 0.07
PDGFRB-201ENST00000261799 ZYXQ15942 572 aaKnown RBP15.48■□□□□ 0.07
PDGFRB-201ENST00000261799 BICC1Q9H694 974 aaKnown RBP15.48■□□□□ 0.07
PDGFRB-201ENST00000261799 TTC41PQ6P2S7 1318 aa15.48■□□□□ 0.07
PDGFRB-201ENST00000261799 TNNT1P13805 278 aa15.48■□□□□ 0.07
PDGFRB-201ENST00000261799 GADL1Q6ZQY3 521 aa15.48■□□□□ 0.07
PDGFRB-201ENST00000261799 GPCPD1Q9NPB8 672 aa15.48■□□□□ 0.07
PDGFRB-201ENST00000261799 ZNF526Q8TF50 670 aaPredicted RBP15.47■□□□□ 0.07
PDGFRB-201ENST00000261799 ATP2B4P23634 1241 aa15.47■□□□□ 0.07
PDGFRB-201ENST00000261799 DPH6Q7L8W6 267 aa15.47■□□□□ 0.07
PDGFRB-201ENST00000261799 CDAN1Q8IWY9 1227 aa15.47■□□□□ 0.07
PDGFRB-201ENST00000261799 GLT8D2Q9H1C3 349 aa15.47■□□□□ 0.07
PDGFRB-201ENST00000261799 TAOK3Q9H2K8 898 aa15.47■□□□□ 0.07
PDGFRB-201ENST00000261799 FAM43AQ8N2R8 423 aa15.46■□□□□ 0.07
PDGFRB-201ENST00000261799 ALS2CR12Q96Q35 445 aa15.46■□□□□ 0.07
PDGFRB-201ENST00000261799 MEIS3Q99687 375 aa15.46■□□□□ 0.07
PDGFRB-201ENST00000261799 PA2G4Q9UQ80 394 aaKnown RBP15.46■□□□□ 0.07
PDGFRB-201ENST00000261799 MBD4O95243 580 aa15.46■□□□□ 0.07
PDGFRB-201ENST00000261799 TOP1P11387 765 aaKnown RBP15.46■□□□□ 0.07
PDGFRB-201ENST00000261799 TRIM47Q96LD4 638 aa15.46■□□□□ 0.07
PDGFRB-201ENST00000261799 TRIM6Q9C030 488 aaPredicted RBP15.46■□□□□ 0.07
PDGFRB-201ENST00000261799 STK24Q9Y6E0 443 aa15.46■□□□□ 0.07
PDGFRB-201ENST00000261799 DNAJC10Q8IXB1 793 aa15.46■□□□□ 0.07
PDGFRB-201ENST00000261799 HACE1Q8IYU2 909 aa15.46■□□□□ 0.07
PDGFRB-201ENST00000261799 C8orf58Q8NAV2 365 aa15.46■□□□□ 0.07
PDGFRB-201ENST00000261799 PKD2L1Q9P0L9 805 aa15.46■□□□□ 0.07
PDGFRB-201ENST00000261799 MRVI1Q9Y6F6 885 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms