RNA–Protein interactions for RNA: ENST00000261789.8

TM9SF1-201, Transcript of transmembrane 9 superfamily member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-201ENST00000261789 CFAP45Q9UL16 551 aa19.25■□□□□ 0.67
TM9SF1-201ENST00000261789 GOLGA6L6A8MZA4 724 aa19.25■□□□□ 0.67
TM9SF1-201ENST00000261789 HAND2P61296 217 aa19.25■□□□□ 0.67
TM9SF1-201ENST00000261789 ERCC4Q92889 916 aaPredicted RBP19.25■□□□□ 0.67
TM9SF1-201ENST00000261789 PRIMPOLQ96LW4 560 aa19.25■□□□□ 0.67
TM9SF1-201ENST00000261789 USP28Q96RU2 1077 aa19.25■□□□□ 0.67
TM9SF1-201ENST00000261789 DSCC1Q9BVC3 393 aa19.25■□□□□ 0.67
TM9SF1-201ENST00000261789 HMGB1P09429 215 aaKnown RBP19.24■□□□□ 0.67
TM9SF1-201ENST00000261789 OSBP2Q969R2 916 aa19.24■□□□□ 0.67
TM9SF1-201ENST00000261789 ADORA1P30542 326 aa19.24■□□□□ 0.67
TM9SF1-201ENST00000261789 CCAR1Q8IX12 1150 aaKnown RBP19.24■□□□□ 0.67
TM9SF1-201ENST00000261789 RNF113AO15541 343 aaKnown RBP19.23■□□□□ 0.67
TM9SF1-201ENST00000261789 PDIA3P30101 505 aaKnown RBP19.23■□□□□ 0.67
TM9SF1-201ENST00000261789 TOM1L2Q6ZVM7 507 aa19.23■□□□□ 0.67
TM9SF1-201ENST00000261789 ZNF75DP51815 510 aa19.23■□□□□ 0.67
TM9SF1-201ENST00000261789 OTUD7BQ6GQQ9 843 aa19.23■□□□□ 0.67
TM9SF1-201ENST00000261789 C11orf57Q6ZUT1 292 aaPredicted RBP19.23■□□□□ 0.67
TM9SF1-201ENST00000261789 RAB11FIP4Q86YS3 637 aa19.23■□□□□ 0.67
TM9SF1-201ENST00000261789 ZNF710Q8N1W2 664 aa19.23■□□□□ 0.67
TM9SF1-201ENST00000261789 ZCRB1Q8TBF4 217 aaKnown RBP19.23■□□□□ 0.67
TM9SF1-201ENST00000261789 LLPHQ9BRT6 129 aaKnown RBP19.23■□□□□ 0.67
TM9SF1-201ENST00000261789 ILDR1Q86SU0 546 aaPredicted RBP19.22■□□□□ 0.67
TM9SF1-201ENST00000261789 FBXW7Q969H0 707 aa19.22■□□□□ 0.67
TM9SF1-201ENST00000261789 HMGN5P82970 282 aaKnown RBP19.22■□□□□ 0.67
TM9SF1-201ENST00000261789 PLA2G4DQ86XP0 818 aa19.22■□□□□ 0.67
TM9SF1-201ENST00000261789 TDRD7Q8NHU6 1098 aaKnown RBP19.22■□□□□ 0.67
TM9SF1-201ENST00000261789 AGXT2Q9BYV1 514 aa19.22■□□□□ 0.67
TM9SF1-201ENST00000261789 TNS3Q68CZ2 1445 aa19.21■□□□□ 0.67
TM9SF1-201ENST00000261789 SCARF1Q14162 830 aa19.21■□□□□ 0.67
TM9SF1-201ENST00000261789 NAA16Q6N069 864 aaPredicted RBP19.21■□□□□ 0.67
TM9SF1-201ENST00000261789 PI16Q6UXB8 463 aa19.21■□□□□ 0.67
TM9SF1-201ENST00000261789 RCOR1Q9UKL0 485 aa19.21■□□□□ 0.67
TM9SF1-201ENST00000261789 PKD1L3Q7Z443 1732 aa19.21■□□□□ 0.67
TM9SF1-201ENST00000261789 SPATA31A3Q5VYP0 1347 aa19.21■□□□□ 0.67
TM9SF1-201ENST00000261789 TPM3P06753 285 aa19.2■□□□□ 0.66
TM9SF1-201ENST00000261789 SNW1Q13573 536 aaKnown RBP19.2■□□□□ 0.66
TM9SF1-201ENST00000261789 WASHC4Q2M389 1173 aa19.2■□□□□ 0.66
TM9SF1-201ENST00000261789 CCDC191Q8NCU4 936 aa19.2■□□□□ 0.66
TM9SF1-201ENST00000261789 MAP7D2Q96T17 732 aa19.2■□□□□ 0.66
TM9SF1-201ENST00000261789 ZMYND15Q9H091 742 aa19.2■□□□□ 0.66
TM9SF1-201ENST00000261789 GPR108Q9NPR9 543 aa19.2■□□□□ 0.66
TM9SF1-201ENST00000261789 FOXP2O15409 715 aa19.2■□□□□ 0.66
TM9SF1-201ENST00000261789 FDPSP14324 419 aaKnown RBP19.2■□□□□ 0.66
TM9SF1-201ENST00000261789 CCDC144BQ3MJ40 725 aa19.2■□□□□ 0.66
TM9SF1-201ENST00000261789 CCDC144CPQ8IYA2 1237 aa19.2■□□□□ 0.66
TM9SF1-201ENST00000261789 ME1P48163 572 aa19.19■□□□□ 0.66
TM9SF1-201ENST00000261789 GORABQ5T7V8 394 aa19.19■□□□□ 0.66
TM9SF1-201ENST00000261789 FAM89AQ96GI7 184 aa19.19■□□□□ 0.66
TM9SF1-201ENST00000261789 GJB4Q9NTQ9 266 aa19.19■□□□□ 0.66
TM9SF1-201ENST00000261789 CEP126Q9P2H0 1117 aa19.19■□□□□ 0.66
TM9SF1-201ENST00000261789 SALL1Q9NSC2 1324 aa19.19■□□□□ 0.66
TM9SF1-201ENST00000261789 RIOK3O14730 519 aaKnown RBP19.19■□□□□ 0.66
TM9SF1-201ENST00000261789 SYNE4Q8N205 404 aa19.19■□□□□ 0.66
TM9SF1-201ENST00000261789 PRDM11Q9NQV5 511 aa19.19■□□□□ 0.66
TM9SF1-201ENST00000261789 CLIP2Q9UDT6 1046 aa19.19■□□□□ 0.66
TM9SF1-201ENST00000261789 TJP1Q07157 1748 aa19.19■□□□□ 0.66
TM9SF1-201ENST00000261789 LAMB4A4D0S4 1761 aa19.19■□□□□ 0.66
TM9SF1-201ENST00000261789 IQCB1Q15051 598 aa19.18■□□□□ 0.66
TM9SF1-201ENST00000261789 CCDC57Q2TAC2 916 aa19.18■□□□□ 0.66
TM9SF1-201ENST00000261789 ZSCAN25Q6NSZ9 544 aa19.18■□□□□ 0.66
TM9SF1-201ENST00000261789 CADPS2Q86UW7 1296 aa19.18■□□□□ 0.66
TM9SF1-201ENST00000261789 XAGE2Q96GT9 111 aa19.18■□□□□ 0.66
TM9SF1-201ENST00000261789 TAOK2Q9UL54 1235 aa19.18■□□□□ 0.66
TM9SF1-201ENST00000261789 KIF3AQ9Y496 699 aa19.18■□□□□ 0.66
TM9SF1-201ENST00000261789 PCDH11XQ9BZA7 1347 aa19.18■□□□□ 0.66
TM9SF1-201ENST00000261789 PCDH11YQ9BZA8 1340 aa19.18■□□□□ 0.66
TM9SF1-201ENST00000261789 GTF2F1P35269 517 aaKnown RBP eCLIP19.18■□□□□ 0.66
TM9SF1-201ENST00000261789 CARMIL3Q8ND23 1372 aa19.18■□□□□ 0.66
TM9SF1-201ENST00000261789 ARID5BQ14865 1188 aa19.17■□□□□ 0.66
TM9SF1-201ENST00000261789 TTC39AQ5SRH9 613 aa19.17■□□□□ 0.66
TM9SF1-201ENST00000261789 CACTINQ8WUQ7 758 aaKnown RBP19.17■□□□□ 0.66
TM9SF1-201ENST00000261789 C16orf45Q96MC5 204 aaPredicted RBP19.17■□□□□ 0.66
TM9SF1-201ENST00000261789 FGAP02671 866 aa19.17■□□□□ 0.66
TM9SF1-201ENST00000261789 POLR3DP05423 398 aaPredicted RBP19.17■□□□□ 0.66
TM9SF1-201ENST00000261789 FSIP1Q8NA03 581 aa19.17■□□□□ 0.66
TM9SF1-201ENST00000261789 PUS7LQ9H0K6 701 aaKnown RBP19.17■□□□□ 0.66
TM9SF1-201ENST00000261789 NUP188Q5SRE5 1749 aa19.16■□□□□ 0.66
TM9SF1-201ENST00000261789 ZAP70P43403 619 aa19.16■□□□□ 0.66
TM9SF1-201ENST00000261789 CCDC73Q6ZRK6 1079 aa19.16■□□□□ 0.66
TM9SF1-201ENST00000261789 ZNF274Q96GC6 653 aaPredicted RBP19.16■□□□□ 0.66
TM9SF1-201ENST00000261789 BCL2L12Q9HB09 334 aa19.16■□□□□ 0.66
TM9SF1-201ENST00000261789 GOLGA6L19H0YKK7 550 aa19.16■□□□□ 0.66
TM9SF1-201ENST00000261789 CIAO1O76071 339 aa19.16■□□□□ 0.66
TM9SF1-201ENST00000261789 CCDC158Q5M9N0 1113 aa19.16■□□□□ 0.66
TM9SF1-201ENST00000261789 ENGASEQ8NFI3 743 aa19.16■□□□□ 0.66
TM9SF1-201ENST00000261789 STRN4Q9NRL3 753 aa19.16■□□□□ 0.66
TM9SF1-201ENST00000261789 WDR17Q8IZU2 1322 aa19.15■□□□□ 0.66
TM9SF1-201ENST00000261789 A0A1B0GVL5 298 aa19.15■□□□□ 0.66
TM9SF1-201ENST00000261789 ERVV-2B6SEH9 535 aa19.15■□□□□ 0.66
TM9SF1-201ENST00000261789 DENND2AQ9ULE3 1009 aa19.15■□□□□ 0.66
TM9SF1-201ENST00000261789 PCDHA7Q9UN72 937 aa19.15■□□□□ 0.66
TM9SF1-201ENST00000261789 MYH15Q9Y2K3 1946 aa19.15■□□□□ 0.66
TM9SF1-201ENST00000261789 KCPQ6ZWJ8 1503 aa19.15■□□□□ 0.66
TM9SF1-201ENST00000261789 KINO60870 393 aaKnown RBP19.15■□□□□ 0.66
TM9SF1-201ENST00000261789 ZNF396Q96N95 335 aaPredicted RBP19.14■□□□□ 0.66
TM9SF1-201ENST00000261789 CLIC4Q9Y696 253 aa19.14■□□□□ 0.66
TM9SF1-201ENST00000261789 CPDO75976 1380 aa19.14■□□□□ 0.65
TM9SF1-201ENST00000261789 ABCC6O95255 1503 aa19.14■□□□□ 0.65
TM9SF1-201ENST00000261789 ZNF335Q9H4Z2 1342 aaPredicted RBP19.14■□□□□ 0.65
TM9SF1-201ENST00000261789 FAM160A1Q05DH4 1040 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms