RNA–Protein interactions for RNA: ENST00000260649.10

SLC3A1-201, Transcript of solute carrier family 3 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC3A1, Length 2,989 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A1-201ENST00000260649 TJP1Q07157 1748 aa13.38□□□□□ -0.27
SLC3A1-201ENST00000260649 PTPDC1A2A3K4 754 aa13.38□□□□□ -0.27
SLC3A1-201ENST00000260649 OTUD7BQ6GQQ9 843 aa13.38□□□□□ -0.27
SLC3A1-201ENST00000260649 LEO1Q8WVC0 666 aaPredicted RBP13.38□□□□□ -0.27
SLC3A1-201ENST00000260649 DSCC1Q9BVC3 393 aa13.38□□□□□ -0.27
SLC3A1-201ENST00000260649 NOL7Q9UMY1 257 aaKnown RBP13.38□□□□□ -0.27
SLC3A1-201ENST00000260649 EXOC5O00471 708 aa13.38□□□□□ -0.27
SLC3A1-201ENST00000260649 IDH1O75874 414 aaKnown RBP13.38□□□□□ -0.27
SLC3A1-201ENST00000260649 TTLL11Q8NHH1 800 aa13.38□□□□□ -0.27
SLC3A1-201ENST00000260649 CCDC39Q9UFE4 941 aa13.38□□□□□ -0.27
SLC3A1-201ENST00000260649 AKAP2Q9Y2D5 859 aa13.38□□□□□ -0.27
SLC3A1-201ENST00000260649 CTDNEP1O95476 244 aa13.37□□□□□ -0.27
SLC3A1-201ENST00000260649 APPP05067 770 aa13.37□□□□□ -0.27
SLC3A1-201ENST00000260649 NUP62CLQ9H1M0 184 aa13.37□□□□□ -0.27
SLC3A1-201ENST00000260649 ALDH8A1Q9H2A2 487 aaPredicted RBP13.37□□□□□ -0.27
SLC3A1-201ENST00000260649 DENND2AQ9ULE3 1009 aa13.37□□□□□ -0.27
SLC3A1-201ENST00000260649 TNS2Q63HR2 1409 aa13.37□□□□□ -0.27
SLC3A1-201ENST00000260649 NUP188Q5SRE5 1749 aa13.37□□□□□ -0.27
SLC3A1-201ENST00000260649 CYP19A1P11511 503 aaPredicted RBP13.37□□□□□ -0.27
SLC3A1-201ENST00000260649 DZIP3Q86Y13 1208 aaKnown RBP13.37□□□□□ -0.27
SLC3A1-201ENST00000260649 NSUN7Q8NE18 718 aaKnown RBP13.37□□□□□ -0.27
SLC3A1-201ENST00000260649 TEX13AQ9BXU3 409 aaPredicted RBP13.37□□□□□ -0.27
SLC3A1-201ENST00000260649 ANKRD18BA2A2Z9 1011 aa13.36□□□□□ -0.27
SLC3A1-201ENST00000260649 FGAP02671 866 aa13.36□□□□□ -0.27
SLC3A1-201ENST00000260649 MCAMP43121 646 aa13.36□□□□□ -0.27
SLC3A1-201ENST00000260649 SPC24Q8NBT2 197 aa13.36□□□□□ -0.27
SLC3A1-201ENST00000260649 ZKSCAN5Q9Y2L8 839 aa13.36□□□□□ -0.27
SLC3A1-201ENST00000260649 R3HCC1Q9Y3T6 440 aaKnown RBP13.36□□□□□ -0.27
SLC3A1-201ENST00000260649 TOGARAM1Q9Y4F4 1720 aa13.36□□□□□ -0.27
SLC3A1-201ENST00000260649 NR1I2O75469 434 aa13.36□□□□□ -0.27
SLC3A1-201ENST00000260649 LETM1O95202 739 aaPredicted RBP13.36□□□□□ -0.27
SLC3A1-201ENST00000260649 STK11IPQ8N1F8 1099 aa13.36□□□□□ -0.27
SLC3A1-201ENST00000260649 C17orf53Q8N3J3 647 aaPredicted RBP13.36□□□□□ -0.27
SLC3A1-201ENST00000260649 PGBD1Q96JS3 809 aa13.36□□□□□ -0.27
SLC3A1-201ENST00000260649 TNMDQ9H2S6 317 aa13.36□□□□□ -0.27
SLC3A1-201ENST00000260649 TTC12Q9H892 705 aaPredicted RBP13.36□□□□□ -0.27
SLC3A1-201ENST00000260649 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.36□□□□□ -0.27
SLC3A1-201ENST00000260649 UBR2Q8IWV8 1755 aa13.36□□□□□ -0.27
SLC3A1-201ENST00000260649 PFKFB2O60825 505 aa13.35□□□□□ -0.27
SLC3A1-201ENST00000260649 CTSWP56202 376 aa13.35□□□□□ -0.27
SLC3A1-201ENST00000260649 RESTQ13127 1097 aa13.35□□□□□ -0.27
SLC3A1-201ENST00000260649 SCAND2PQ9GZW5 306 aaPredicted RBP13.35□□□□□ -0.27
SLC3A1-201ENST00000260649 GJB4Q9NTQ9 266 aa13.35□□□□□ -0.27
SLC3A1-201ENST00000260649 RFX7Q2KHR2 1363 aa13.35□□□□□ -0.27
SLC3A1-201ENST00000260649 FOXP2O15409 715 aa13.35□□□□□ -0.27
SLC3A1-201ENST00000260649 GPAA1O43292 621 aa13.35□□□□□ -0.27
SLC3A1-201ENST00000260649 AP5Z1O43299 807 aa13.35□□□□□ -0.27
SLC3A1-201ENST00000260649 CSF1RP07333 972 aa13.35□□□□□ -0.27
SLC3A1-201ENST00000260649 HMGB1P09429 215 aaKnown RBP13.35□□□□□ -0.27
SLC3A1-201ENST00000260649 EXOSC10Q01780 885 aaKnown RBP13.35□□□□□ -0.27
SLC3A1-201ENST00000260649 SLC9C2Q5TAH2 1124 aa13.35□□□□□ -0.27
SLC3A1-201ENST00000260649 SHANK3Q9BYB0 1731 aa13.35□□□□□ -0.27
SLC3A1-201ENST00000260649 STRCQ7RTU9 1775 aa13.35□□□□□ -0.27
SLC3A1-201ENST00000260649 NUTM2BA6NNL0 878 aaPredicted RBP13.35□□□□□ -0.27
SLC3A1-201ENST00000260649 NUTM2EB1AL46 878 aaPredicted RBP13.35□□□□□ -0.27
SLC3A1-201ENST00000260649 PDIA3P30101 505 aaKnown RBP13.35□□□□□ -0.27
SLC3A1-201ENST00000260649 PHKA1P46020 1223 aa13.35□□□□□ -0.27
SLC3A1-201ENST00000260649 MAP3K11Q16584 847 aa13.35□□□□□ -0.27
SLC3A1-201ENST00000260649 IMMTQ16891 758 aaKnown RBP13.35□□□□□ -0.27
SLC3A1-201ENST00000260649 NUTM2AQ8IVF1 878 aaPredicted RBP13.35□□□□□ -0.27
SLC3A1-201ENST00000260649 FBXW7Q969H0 707 aa13.35□□□□□ -0.27
SLC3A1-201ENST00000260649 RIPOR2Q9Y4F9 1068 aa13.35□□□□□ -0.27
SLC3A1-201ENST00000260649 A0A087WWV3 80 aa13.34□□□□□ -0.27
SLC3A1-201ENST00000260649 RXRAP19793 462 aa13.34□□□□□ -0.27
SLC3A1-201ENST00000260649 TRIM28Q13263 835 aaKnown RBP13.34□□□□□ -0.27
SLC3A1-201ENST00000260649 LUZP1Q86V48 1076 aa13.34□□□□□ -0.27
SLC3A1-201ENST00000260649 FUCA2Q9BTY2 467 aa13.34□□□□□ -0.27
SLC3A1-201ENST00000260649 PLEKHG2Q9H7P9 1386 aa13.34□□□□□ -0.27
SLC3A1-201ENST00000260649 CCDC192P0DO97 292 aa13.34□□□□□ -0.27
SLC3A1-201ENST00000260649 UBN2Q6ZU65 1347 aa13.34□□□□□ -0.27
SLC3A1-201ENST00000260649 PRC1O43663 620 aa13.33□□□□□ -0.28
SLC3A1-201ENST00000260649 VSIG10Q8N0Z9 540 aa13.33□□□□□ -0.28
SLC3A1-201ENST00000260649 NKX2-3Q8TAU0 364 aa13.33□□□□□ -0.28
SLC3A1-201ENST00000260649 PIH1D3Q9NQM4 214 aaKnown RBP13.33□□□□□ -0.28
SLC3A1-201ENST00000260649 INCENPQ9NQS7 918 aa13.33□□□□□ -0.28
SLC3A1-201ENST00000260649 KLF18A0A0U1RQI7 1052 aa13.33□□□□□ -0.28
SLC3A1-201ENST00000260649 TYRO3Q06418 890 aa13.33□□□□□ -0.28
SLC3A1-201ENST00000260649 HS1BP3Q53T59 392 aa13.33□□□□□ -0.28
SLC3A1-201ENST00000260649 APPBP2Q92624 585 aa13.33□□□□□ -0.28
SLC3A1-201ENST00000260649 ERCC4Q92889 916 aaPredicted RBP13.33□□□□□ -0.28
SLC3A1-201ENST00000260649 SEC31BQ9NQW1 1179 aa13.33□□□□□ -0.28
SLC3A1-201ENST00000260649 KCNQ4P56696 695 aa13.32□□□□□ -0.28
SLC3A1-201ENST00000260649 RALYLQ86SE5 291 aaKnown RBP13.32□□□□□ -0.28
SLC3A1-201ENST00000260649 CCDC144CPQ8IYA2 1237 aa13.32□□□□□ -0.28
SLC3A1-201ENST00000260649 SMARCC2Q8TAQ2 1214 aa13.32□□□□□ -0.28
SLC3A1-201ENST00000260649 GOLGA8BA8MQT2 603 aa13.32□□□□□ -0.28
SLC3A1-201ENST00000260649 ZNF213O14771 459 aa13.32□□□□□ -0.28
SLC3A1-201ENST00000260649 POLR3DP05423 398 aaPredicted RBP13.32□□□□□ -0.28
SLC3A1-201ENST00000260649 ANO6Q4KMQ2 910 aa13.32□□□□□ -0.28
SLC3A1-201ENST00000260649 SMIM5Q71RC9 77 aa13.32□□□□□ -0.28
SLC3A1-201ENST00000260649 USP28Q96RU2 1077 aa13.32□□□□□ -0.28
SLC3A1-201ENST00000260649 IQSEC3Q9UPP2 1182 aaPredicted RBP13.32□□□□□ -0.28
SLC3A1-201ENST00000260649 RIC1Q4ADV7 1423 aa13.32□□□□□ -0.28
SLC3A1-201ENST00000260649 OFD1O75665 1012 aa13.32□□□□□ -0.28
SLC3A1-201ENST00000260649 ATP6V1AP38606 617 aa13.32□□□□□ -0.28
SLC3A1-201ENST00000260649 UVSSAQ2YD98 709 aa13.32□□□□□ -0.28
SLC3A1-201ENST00000260649 CCDC102BQ68D86 513 aa13.32□□□□□ -0.28
SLC3A1-201ENST00000260649 WWC3Q9ULE0 1092 aa13.32□□□□□ -0.28
SLC3A1-201ENST00000260649 MRVI1Q9Y6F6 885 aa13.32□□□□□ -0.28
SLC3A1-201ENST00000260649 ABCA3Q99758 1704 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms