RNA–Protein interactions for RNA: ENST00000257552.6

MSI1-201, Transcript of musashi RNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSI1, Length 2,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1-201ENST00000257552 NBPF11Q86T75 865 aa17.22■□□□□ 0.35
MSI1-201ENST00000257552 CEP57L1Q8IYX8 460 aa17.22■□□□□ 0.35
MSI1-201ENST00000257552 IFNL2Q8IZJ0 200 aa17.22■□□□□ 0.35
MSI1-201ENST00000257552 TTC5Q8N0Z6 440 aa17.21■□□□□ 0.35
MSI1-201ENST00000257552 FSIP1Q8NA03 581 aa17.21■□□□□ 0.35
MSI1-201ENST00000257552 NEK11Q8NG66 645 aa17.21■□□□□ 0.35
MSI1-201ENST00000257552 KLHDC4Q8TBB5 520 aa17.21■□□□□ 0.35
MSI1-201ENST00000257552 CHGBP05060 677 aa17.21■□□□□ 0.35
MSI1-201ENST00000257552 PLA2G4AP47712 749 aa17.21■□□□□ 0.35
MSI1-201ENST00000257552 COPS6Q7L5N1 327 aa17.21■□□□□ 0.35
MSI1-201ENST00000257552 USP28Q96RU2 1077 aa17.21■□□□□ 0.35
MSI1-201ENST00000257552 SDF4Q9BRK5 362 aa17.21■□□□□ 0.35
MSI1-201ENST00000257552 NDUFB9Q9Y6M9 179 aa17.21■□□□□ 0.35
MSI1-201ENST00000257552 TRPM3Q9HCF6 1732 aaPredicted RBP17.21■□□□□ 0.35
MSI1-201ENST00000257552 XAGE3Q8WTP9 111 aa17.2■□□□□ 0.34
MSI1-201ENST00000257552 KDM6AO15550 1401 aaPredicted RBP17.2■□□□□ 0.34
MSI1-201ENST00000257552 PDIA6Q15084 440 aa17.2■□□□□ 0.34
MSI1-201ENST00000257552 XPO4Q9C0E2 1151 aaKnown RBP17.2■□□□□ 0.34
MSI1-201ENST00000257552 IFNKQ9P0W0 207 aa17.2■□□□□ 0.34
MSI1-201ENST00000257552 SLAIN2Q9P270 581 aa17.2■□□□□ 0.34
MSI1-201ENST00000257552 DNAI1Q9UI46 699 aa17.2■□□□□ 0.34
MSI1-201ENST00000257552 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.2■□□□□ 0.34
MSI1-201ENST00000257552 BIN1O00499 593 aa17.19■□□□□ 0.34
MSI1-201ENST00000257552 CTAGE5O15320 804 aa17.19■□□□□ 0.34
MSI1-201ENST00000257552 SEC31AO94979 1220 aaKnown RBP17.19■□□□□ 0.34
MSI1-201ENST00000257552 GSDMDP57764 484 aa17.19■□□□□ 0.34
MSI1-201ENST00000257552 CABP4P57796 275 aa17.19■□□□□ 0.34
MSI1-201ENST00000257552 ARMCX5Q6P1M9 558 aa17.19■□□□□ 0.34
MSI1-201ENST00000257552 KIF2AO00139 706 aaPredicted RBP17.19■□□□□ 0.34
MSI1-201ENST00000257552 TRIM34Q9BYJ4 488 aa17.19■□□□□ 0.34
MSI1-201ENST00000257552 EPC1Q9H2F5 836 aa17.19■□□□□ 0.34
MSI1-201ENST00000257552 ZSCAN16Q9H4T2 348 aaPredicted RBP17.19■□□□□ 0.34
MSI1-201ENST00000257552 L2HGDHQ9H9P8 463 aa17.19■□□□□ 0.34
MSI1-201ENST00000257552 TNS3Q68CZ2 1445 aa17.19■□□□□ 0.34
MSI1-201ENST00000257552 HIP1O00291 1037 aa17.19■□□□□ 0.34
MSI1-201ENST00000257552 PTCD1O75127 700 aaKnown RBP17.19■□□□□ 0.34
MSI1-201ENST00000257552 SASH1O94885 1247 aa17.19■□□□□ 0.34
MSI1-201ENST00000257552 SFPQP23246 707 aaKnown RBP eCLIP17.19■□□□□ 0.34
MSI1-201ENST00000257552 ADD1P35611 737 aaKnown RBP17.19■□□□□ 0.34
MSI1-201ENST00000257552 G3BP1Q13283 466 aaKnown RBP eCLIP17.19■□□□□ 0.34
MSI1-201ENST00000257552 CCDC129Q6ZRS4 1044 aa17.19■□□□□ 0.34
MSI1-201ENST00000257552 UBXN4Q92575 508 aa17.19■□□□□ 0.34
MSI1-201ENST00000257552 NEK1Q96PY6 1258 aa17.19■□□□□ 0.34
MSI1-201ENST00000257552 ZCCHC17Q9NP64 241 aaKnown RBP17.19■□□□□ 0.34
MSI1-201ENST00000257552 ATP5J2-PTCD1G3V325 749 aa17.18■□□□□ 0.34
MSI1-201ENST00000257552 SCRN1Q12765 414 aa17.18■□□□□ 0.34
MSI1-201ENST00000257552 MYD88Q99836 296 aa17.18■□□□□ 0.34
MSI1-201ENST00000257552 DDX21Q9NR30 783 aaKnown RBP eCLIP17.18■□□□□ 0.34
MSI1-201ENST00000257552 A0A1B0GVL5 298 aa17.18■□□□□ 0.34
MSI1-201ENST00000257552 CCT2P78371 535 aaKnown RBP17.18■□□□□ 0.34
MSI1-201ENST00000257552 ZRSR1Q15695 479 aaKnown RBP17.18■□□□□ 0.34
MSI1-201ENST00000257552 TMCO3Q6UWJ1 677 aa17.18■□□□□ 0.34
MSI1-201ENST00000257552 SUCLG2Q96I99 432 aa17.18■□□□□ 0.34
MSI1-201ENST00000257552 SEC62Q99442 399 aaKnown RBP17.18■□□□□ 0.34
MSI1-201ENST00000257552 DNAJC2Q99543 621 aaKnown RBP17.18■□□□□ 0.34
MSI1-201ENST00000257552 ISM2Q6H9L7 571 aa17.17■□□□□ 0.34
MSI1-201ENST00000257552 FAM177A1Q8N128 213 aaPredicted RBP17.17■□□□□ 0.34
MSI1-201ENST00000257552 ZBTB9Q96C00 473 aa17.17■□□□□ 0.34
MSI1-201ENST00000257552 BICC1Q9H694 974 aaKnown RBP17.17■□□□□ 0.34
MSI1-201ENST00000257552 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.17■□□□□ 0.34
MSI1-201ENST00000257552 RCOR1Q9UKL0 485 aa17.17■□□□□ 0.34
MSI1-201ENST00000257552 KDM4FA0A1W2PPD8 638 aa17.17■□□□□ 0.34
MSI1-201ENST00000257552 FAM160A1Q05DH4 1040 aa17.17■□□□□ 0.34
MSI1-201ENST00000257552 DPCR1Q3MIW9 517 aa17.17■□□□□ 0.34
MSI1-201ENST00000257552 ERC1Q8IUD2 1116 aa17.17■□□□□ 0.34
MSI1-201ENST00000257552 NAT10Q9H0A0 1025 aaKnown RBP17.17■□□□□ 0.34
MSI1-201ENST00000257552 ZNF330Q9Y3S2 320 aaPredicted RBP17.17■□□□□ 0.34
MSI1-201ENST00000257552 TAF5LO75529 589 aa17.16■□□□□ 0.34
MSI1-201ENST00000257552 PTPN21Q16825 1174 aa17.16■□□□□ 0.34
MSI1-201ENST00000257552 MNS1Q8NEH6 495 aa17.16■□□□□ 0.34
MSI1-201ENST00000257552 TULP2O00295 520 aa17.16■□□□□ 0.34
MSI1-201ENST00000257552 URI1O94763 535 aaPredicted RBP17.16■□□□□ 0.34
MSI1-201ENST00000257552 IGKV5-2P06315 115 aa17.16■□□□□ 0.34
MSI1-201ENST00000257552 CCDC93Q567U6 631 aa17.16■□□□□ 0.34
MSI1-201ENST00000257552 OSBPL5Q9H0X9 879 aaPredicted RBP17.16■□□□□ 0.34
MSI1-201ENST00000257552 CCDC9Q9Y3X0 531 aaKnown RBP17.16■□□□□ 0.34
MSI1-201ENST00000257552 GRM8O00222 908 aa17.16■□□□□ 0.34
MSI1-201ENST00000257552 DDX58O95786 925 aaKnown RBP17.16■□□□□ 0.34
MSI1-201ENST00000257552 ENGASEQ8NFI3 743 aa17.16■□□□□ 0.34
MSI1-201ENST00000257552 DCAF5Q96JK2 942 aa17.16■□□□□ 0.34
MSI1-201ENST00000257552 CHMP4AQ9BY43 222 aa17.16■□□□□ 0.34
MSI1-201ENST00000257552 NCOA5Q9HCD5 579 aaKnown RBP17.16■□□□□ 0.34
MSI1-201ENST00000257552 PXDNLA1KZ92 1463 aa17.15■□□□□ 0.34
MSI1-201ENST00000257552 NCAPD2Q15021 1401 aa17.15■□□□□ 0.34
MSI1-201ENST00000257552 ST5P78524 1137 aa17.15■□□□□ 0.34
MSI1-201ENST00000257552 TMX1Q9H3N1 280 aa17.15■□□□□ 0.34
MSI1-201ENST00000257552 IPO4Q8TEX9 1081 aaKnown RBP17.15■□□□□ 0.34
MSI1-201ENST00000257552 KAZALD1Q96I82 304 aa17.15■□□□□ 0.34
MSI1-201ENST00000257552 HMG20BQ9P0W2 317 aa17.15■□□□□ 0.34
MSI1-201ENST00000257552 LMO7Q8WWI1 1683 aa17.14■□□□□ 0.33
MSI1-201ENST00000257552 RAD51AP2Q09MP3 1159 aa17.14■□□□□ 0.33
MSI1-201ENST00000257552 LINS1Q8NG48 757 aa17.14■□□□□ 0.33
MSI1-201ENST00000257552 CARD6Q9BX69 1037 aa17.14■□□□□ 0.33
MSI1-201ENST00000257552 ARGLU1Q9NWB6 273 aaPredicted RBP17.14■□□□□ 0.33
MSI1-201ENST00000257552 HEG1Q9ULI3 1381 aa17.14■□□□□ 0.33
MSI1-201ENST00000257552 PTPDC1A2A3K4 754 aa17.14■□□□□ 0.33
MSI1-201ENST00000257552 LMOD1P29536 600 aaPredicted RBP17.14■□□□□ 0.33
MSI1-201ENST00000257552 EVA1CP58658 441 aa17.14■□□□□ 0.33
MSI1-201ENST00000257552 GOLGA8FQ08AF8 430 aa17.14■□□□□ 0.33
MSI1-201ENST00000257552 GOLGA8DPQ0D2H9 430 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms