RNA–Protein interactions for RNA: ENST00000256637.7

SORT1-201, Transcript of sortilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SORT1, Length 7,028 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-201ENST00000256637 AMPD3Q01432 767 aa19.37■□□□□ 0.69
SORT1-201ENST00000256637 STXBP4Q6ZWJ1 553 aa19.37■□□□□ 0.69
SORT1-201ENST00000256637 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.37■□□□□ 0.694e-7■■□□□ 11.5
SORT1-201ENST00000256637 PBRM1Q86U86 1689 aa19.37■□□□□ 0.69
SORT1-201ENST00000256637 DLGAP5Q15398 846 aa19.37■□□□□ 0.69
SORT1-201ENST00000256637 TGFBRAP1Q8WUH2 860 aa19.37■□□□□ 0.69
SORT1-201ENST00000256637 ABL1P00519 1130 aa19.37■□□□□ 0.69
SORT1-201ENST00000256637 RBM10P98175 930 aaKnown RBP19.37■□□□□ 0.69
SORT1-201ENST00000256637 ZNF772Q68DY9 489 aaPredicted RBP19.37■□□□□ 0.69
SORT1-201ENST00000256637 CALML3P27482 149 aa19.36■□□□□ 0.69
SORT1-201ENST00000256637 CCDC169A6NNP5 214 aa19.36■□□□□ 0.69
SORT1-201ENST00000256637 B4DLN1 442 aa19.36■□□□□ 0.69
SORT1-201ENST00000256637 MRPL12P52815 198 aaKnown RBP19.36■□□□□ 0.69
SORT1-201ENST00000256637 BIRC2Q13490 618 aa19.36■□□□□ 0.69
SORT1-201ENST00000256637 CLRN2A0PK11 232 aa19.36■□□□□ 0.69
SORT1-201ENST00000256637 MBD3O95983 291 aa19.36■□□□□ 0.69
SORT1-201ENST00000256637 Q3C1V9 767 aa19.36■□□□□ 0.69
SORT1-201ENST00000256637 ARHGEF10LQ9HCE6 1279 aa19.36■□□□□ 0.69
SORT1-201ENST00000256637 KSR2Q6VAB6 950 aa19.36■□□□□ 0.69
SORT1-201ENST00000256637 CCDC129Q6ZRS4 1044 aa19.36■□□□□ 0.69
SORT1-201ENST00000256637 ERMNQ8TAM6 284 aa19.36■□□□□ 0.69
SORT1-201ENST00000256637 ARHGAP29Q52LW3 1261 aa19.35■□□□□ 0.69
SORT1-201ENST00000256637 IL27Q8NEV9 243 aa19.35■□□□□ 0.69
SORT1-201ENST00000256637 RNF34Q969K3 372 aa19.35■□□□□ 0.69
SORT1-201ENST00000256637 NACA2Q9H009 215 aa19.35■□□□□ 0.69
SORT1-201ENST00000256637 FGFR1OPO95684 399 aaKnown RBP19.35■□□□□ 0.69
SORT1-201ENST00000256637 GRIPAP1Q4V328 841 aa19.35■□□□□ 0.69
SORT1-201ENST00000256637 YTHDC2Q9H6S0 1430 aaKnown RBP19.35■□□□□ 0.69
SORT1-201ENST00000256637 MBD4O95243 580 aa19.35■□□□□ 0.69
SORT1-201ENST00000256637 MAPKAPK5Q8IW41 473 aa19.35■□□□□ 0.69
SORT1-201ENST00000256637 TXLNBQ8N3L3 684 aa19.35■□□□□ 0.69
SORT1-201ENST00000256637 METTL13Q8N6R0 699 aa19.35■□□□□ 0.69
SORT1-201ENST00000256637 MAP3K5Q99683 1374 aa19.35■□□□□ 0.69
SORT1-201ENST00000256637 STK25O00506 426 aa19.35■□□□□ 0.69
SORT1-201ENST00000256637 PARP1P09874 1014 aaKnown RBP19.35■□□□□ 0.69
SORT1-201ENST00000256637 MAP3K11Q16584 847 aa19.35■□□□□ 0.69
SORT1-201ENST00000256637 ZBTB7AO95365 584 aa19.35■□□□□ 0.69
SORT1-201ENST00000256637 NCAPG2Q86XI2 1143 aa19.35■□□□□ 0.69
SORT1-201ENST00000256637 KIAA0825Q8IV33 1275 aa19.35■□□□□ 0.69
SORT1-201ENST00000256637 DYDC1Q8WWB3 177 aa19.35■□□□□ 0.69
SORT1-201ENST00000256637 CCP110O43303 1012 aa19.34■□□□□ 0.69
SORT1-201ENST00000256637 TIMM10P62072 90 aa19.34■□□□□ 0.69
SORT1-201ENST00000256637 IFRD2Q12894 506 aaPredicted RBP19.34■□□□□ 0.69
SORT1-201ENST00000256637 NMIQ13287 307 aaPredicted RBP19.34■□□□□ 0.69
SORT1-201ENST00000256637 RHPN1Q8TCX5 695 aa19.34■□□□□ 0.69
SORT1-201ENST00000256637 EEF2P13639 858 aaKnown RBP19.34■□□□□ 0.69
SORT1-201ENST00000256637 VPS36Q86VN1 386 aa19.34■□□□□ 0.69
SORT1-201ENST00000256637 FAM43AQ8N2R8 423 aa19.34■□□□□ 0.69
SORT1-201ENST00000256637 WDR62O43379 1518 aa19.34■□□□□ 0.69
SORT1-201ENST00000256637 NKTRP30414 1462 aaKnown RBP19.34■□□□□ 0.69
SORT1-201ENST00000256637 HOOK3Q86VS8 718 aa19.34■□□□□ 0.69
SORT1-201ENST00000256637 DNAJC10Q8IXB1 793 aa19.34■□□□□ 0.69
SORT1-201ENST00000256637 PDE6BP35913 854 aa19.33■□□□□ 0.69
SORT1-201ENST00000256637 SULF1Q8IWU6 871 aa19.33■□□□□ 0.69
SORT1-201ENST00000256637 UQCRHP07919 91 aa19.33■□□□□ 0.69
SORT1-201ENST00000256637 EZRP15311 586 aaKnown RBP19.33■□□□□ 0.68
SORT1-201ENST00000256637 BRF1Q92994 677 aa19.33■□□□□ 0.68
SORT1-201ENST00000256637 TRIM47Q96LD4 638 aa19.33■□□□□ 0.68
SORT1-201ENST00000256637 KRT5P13647 590 aa19.33■□□□□ 0.68
SORT1-201ENST00000256637 FAM200AQ8TCP9 573 aa19.33■□□□□ 0.68
SORT1-201ENST00000256637 TRPC5Q9UL62 973 aaPredicted RBP19.33■□□□□ 0.68
SORT1-201ENST00000256637 DUOX2Q9NRD8 1548 aa19.32■□□□□ 0.68
SORT1-201ENST00000256637 ALDH1B1P30837 517 aa19.32■□□□□ 0.68
SORT1-201ENST00000256637 CALRP27797 417 aaKnown RBP19.32■□□□□ 0.68
SORT1-201ENST00000256637 KRT9P35527 623 aa19.32■□□□□ 0.68
SORT1-201ENST00000256637 MCMDC2Q4G0Z9 681 aa19.32■□□□□ 0.68
SORT1-201ENST00000256637 NSMFQ6X4W1 530 aa19.32■□□□□ 0.68
SORT1-201ENST00000256637 CASQ1P31415 396 aa19.32■□□□□ 0.68
SORT1-201ENST00000256637 KRT27Q7Z3Y8 459 aa19.32■□□□□ 0.68
SORT1-201ENST00000256637 IP6K1Q92551 441 aa19.32■□□□□ 0.68
SORT1-201ENST00000256637 KRT13P13646 458 aa19.32■□□□□ 0.68
SORT1-201ENST00000256637 RRAGBQ5VZM2 374 aa19.32■□□□□ 0.68
SORT1-201ENST00000256637 TRMT1Q9NXH9 659 aaKnown RBP19.32■□□□□ 0.68
SORT1-201ENST00000256637 CTDSPL2Q05D32 466 aa19.31■□□□□ 0.68
SORT1-201ENST00000256637 CCDC148Q8NFR7 591 aa19.31■□□□□ 0.68
SORT1-201ENST00000256637 TBC1D5Q92609 795 aa19.31■□□□□ 0.68
SORT1-201ENST00000256637 PRDM1O75626 825 aa19.31■□□□□ 0.68
SORT1-201ENST00000256637 APOBRQ0VD83 1088 aa19.31■□□□□ 0.68
SORT1-201ENST00000256637 KMT5BQ4FZB7 885 aa19.31■□□□□ 0.68
SORT1-201ENST00000256637 TTF2Q9UNY4 1162 aaKnown RBP19.31■□□□□ 0.68
SORT1-201ENST00000256637 CCNT1O60563 726 aaKnown RBP19.3■□□□□ 0.68
SORT1-201ENST00000256637 IGBP1P78318 339 aa19.3■□□□□ 0.68
SORT1-201ENST00000256637 FRMPD2Q68DX3 1309 aaPredicted RBP19.3■□□□□ 0.68
SORT1-201ENST00000256637 DTNBO60941 627 aa19.3■□□□□ 0.68
SORT1-201ENST00000256637 PLCG2P16885 1265 aa19.3■□□□□ 0.68
SORT1-201ENST00000256637 IL15P40933 162 aaPredicted RBP19.3■□□□□ 0.68
SORT1-201ENST00000256637 CCDC117Q8IWD4 279 aaPredicted RBP19.3■□□□□ 0.68
SORT1-201ENST00000256637 M0QZ92 97 aa19.3■□□□□ 0.68
SORT1-201ENST00000256637 TTC30AQ86WT1 665 aa19.3■□□□□ 0.68
SORT1-201ENST00000256637 USP40Q9NVE5 1235 aa19.3■□□□□ 0.68
SORT1-201ENST00000256637 LUZP1Q86V48 1076 aa19.3■□□□□ 0.68
SORT1-201ENST00000256637 DHX58Q96C10 678 aa19.3■□□□□ 0.68
SORT1-201ENST00000256637 ASIC1P78348 528 aa19.29■□□□□ 0.68
SORT1-201ENST00000256637 BRDTQ58F21 947 aaPredicted RBP19.29■□□□□ 0.68
SORT1-201ENST00000256637 GPIHBP1Q8IV16 184 aa19.29■□□□□ 0.68
SORT1-201ENST00000256637 ERCC3P19447 782 aa19.29■□□□□ 0.68
SORT1-201ENST00000256637 TSPYL6Q8N831 410 aa19.29■□□□□ 0.68
SORT1-201ENST00000256637 CCDC191Q8NCU4 936 aa19.29■□□□□ 0.68
SORT1-201ENST00000256637 ZBED4O75132 1171 aa19.29■□□□□ 0.68
SORT1-201ENST00000256637 TOP1P11387 765 aaKnown RBP19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 165.3 ms