RNA–Protein interactions for RNA: ENST00000255465.6

CCNA1-201, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-201ENST00000255465 GNPATO15228 680 aa13.87□□□□□ -0.19
CCNA1-201ENST00000255465 TUBB4AP04350 444 aa13.87□□□□□ -0.19
CCNA1-201ENST00000255465 CYP19A1P11511 503 aaPredicted RBP13.87□□□□□ -0.19
CCNA1-201ENST00000255465 ANAPC15P60006 121 aa13.87□□□□□ -0.19
CCNA1-201ENST00000255465 MAP9Q49MG5 647 aa13.87□□□□□ -0.19
CCNA1-201ENST00000255465 SMIM5Q71RC9 77 aa13.87□□□□□ -0.19
CCNA1-201ENST00000255465 COL23A1Q86Y22 540 aaPredicted RBP13.87□□□□□ -0.19
CCNA1-201ENST00000255465 C17orf53Q8N3J3 647 aaPredicted RBP13.87□□□□□ -0.19
CCNA1-201ENST00000255465 MKRN1Q9UHC7 482 aaKnown RBP13.87□□□□□ -0.19
CCNA1-201ENST00000255465 PCDHB15Q9Y5E8 787 aa13.87□□□□□ -0.19
CCNA1-201ENST00000255465 FLAD1Q8NFF5 587 aa13.86□□□□□ -0.19
CCNA1-201ENST00000255465 TEX13AQ9BXU3 409 aaPredicted RBP13.86□□□□□ -0.19
CCNA1-201ENST00000255465 BABAM1Q9NWV8 329 aa13.86□□□□□ -0.19
CCNA1-201ENST00000255465 TSPYL4Q9UJ04 414 aa13.86□□□□□ -0.19
CCNA1-201ENST00000255465 COG6Q9Y2V7 657 aa13.86□□□□□ -0.19
CCNA1-201ENST00000255465 LAMB4A4D0S4 1761 aa13.86□□□□□ -0.19
CCNA1-201ENST00000255465 C4AP0C0L4 1744 aa13.86□□□□□ -0.19
CCNA1-201ENST00000255465 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.85□□□□□ -0.19
CCNA1-201ENST00000255465 RPS6KA4O75676 772 aa13.85□□□□□ -0.19
CCNA1-201ENST00000255465 BCAR3O75815 825 aa13.85□□□□□ -0.19
CCNA1-201ENST00000255465 TPM1P09493 284 aa13.85□□□□□ -0.19
CCNA1-201ENST00000255465 ACTN2P35609 894 aa13.85□□□□□ -0.19
CCNA1-201ENST00000255465 CORO7P57737 925 aa13.85□□□□□ -0.19
CCNA1-201ENST00000255465 BMP2KLQ5H9B9 411 aa13.85□□□□□ -0.19
CCNA1-201ENST00000255465 INTS5Q6P9B9 1019 aaKnown RBP13.85□□□□□ -0.19
CCNA1-201ENST00000255465 EFCAB13Q8IY85 973 aa13.85□□□□□ -0.19
CCNA1-201ENST00000255465 RTCBQ9Y3I0 505 aaKnown RBP13.85□□□□□ -0.19
CCNA1-201ENST00000255465 LRP5O75197 1615 aa13.85□□□□□ -0.19
CCNA1-201ENST00000255465 COL24A1Q17RW2 1714 aa13.85□□□□□ -0.19
CCNA1-201ENST00000255465 AK9Q5TCS8 1911 aa13.85□□□□□ -0.19
CCNA1-201ENST00000255465 CHL1O00533 1208 aa13.84□□□□□ -0.19
CCNA1-201ENST00000255465 ZBTB7AO95365 584 aa13.84□□□□□ -0.19
CCNA1-201ENST00000255465 SLU7O95391 586 aaKnown RBP13.84□□□□□ -0.19
CCNA1-201ENST00000255465 STARD3NLO95772 234 aa13.84□□□□□ -0.19
CCNA1-201ENST00000255465 SNRPA1P09661 255 aaKnown RBP13.84□□□□□ -0.19
CCNA1-201ENST00000255465 PNMA6AP0CW24 399 aaPredicted RBP13.84□□□□□ -0.19
CCNA1-201ENST00000255465 EIF4A1P60842 406 aaKnown RBP13.84□□□□□ -0.19
CCNA1-201ENST00000255465 CCDC27Q2M243 656 aa13.84□□□□□ -0.19
CCNA1-201ENST00000255465 NUTM1Q86Y26 1132 aa13.84□□□□□ -0.19
CCNA1-201ENST00000255465 KCND1Q9NSA2 647 aa13.84□□□□□ -0.19
CCNA1-201ENST00000255465 CCDC87Q9NVE4 849 aa13.84□□□□□ -0.19
CCNA1-201ENST00000255465 LCMT1Q9UIC8 334 aa13.84□□□□□ -0.19
CCNA1-201ENST00000255465 PRAMEF22A3QJZ6 481 aa13.84□□□□□ -0.19
CCNA1-201ENST00000255465 MPHOSPH10O00566 681 aaKnown RBP13.84□□□□□ -0.19
CCNA1-201ENST00000255465 NEMFO60524 1076 aa13.84□□□□□ -0.19
CCNA1-201ENST00000255465 PLA2G4AP47712 749 aa13.84□□□□□ -0.19
CCNA1-201ENST00000255465 DNAJC21Q5F1R6 531 aaKnown RBP13.84□□□□□ -0.19
CCNA1-201ENST00000255465 CCDC183Q5T5S1 534 aa13.84□□□□□ -0.19
CCNA1-201ENST00000255465 JAKMIP3Q5VZ66 844 aa13.84□□□□□ -0.19
CCNA1-201ENST00000255465 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.84□□□□□ -0.19
CCNA1-201ENST00000255465 NEK11Q8NG66 645 aa13.84□□□□□ -0.19
CCNA1-201ENST00000255465 SLC16A10Q8TF71 515 aa13.84□□□□□ -0.19
CCNA1-201ENST00000255465 USP16Q9Y5T5 823 aa13.84□□□□□ -0.19
CCNA1-201ENST00000255465 IPO7O95373 1038 aaKnown RBP13.83□□□□□ -0.2
CCNA1-201ENST00000255465 BIRC2Q13490 618 aa13.83□□□□□ -0.2
CCNA1-201ENST00000255465 CC2D2BQ6DHV5 1058 aa13.83□□□□□ -0.2
CCNA1-201ENST00000255465 UTP14AQ9BVJ6 771 aaKnown RBP13.83□□□□□ -0.2
CCNA1-201ENST00000255465 MTFR1LQ9H019 292 aa13.83□□□□□ -0.2
CCNA1-201ENST00000255465 ZRANB2O95218 330 aaKnown RBP eCLIP13.82□□□□□ -0.2
CCNA1-201ENST00000255465 SMC2O95347 1197 aa13.82□□□□□ -0.2
CCNA1-201ENST00000255465 CEP135Q66GS9 1140 aa13.82□□□□□ -0.2
CCNA1-201ENST00000255465 LEKR1Q6ZMV7 388 aa13.82□□□□□ -0.2
CCNA1-201ENST00000255465 FILIP1Q7Z7B0 1213 aa13.82□□□□□ -0.2
CCNA1-201ENST00000255465 FMNL3Q8IVF7 1028 aa13.82□□□□□ -0.2
CCNA1-201ENST00000255465 SPON1Q9HCB6 807 aa13.82□□□□□ -0.2
CCNA1-201ENST00000255465 ATF5Q9Y2D1 282 aaPredicted RBP13.82□□□□□ -0.2
CCNA1-201ENST00000255465 ZBTB1Q9Y2K1 713 aa13.82□□□□□ -0.2
CCNA1-201ENST00000255465 GIGYF1O75420 1035 aaPredicted RBP13.82□□□□□ -0.2
CCNA1-201ENST00000255465 SART3Q15020 963 aaKnown RBP13.82□□□□□ -0.2
CCNA1-201ENST00000255465 TRAPPC3LQ5T215 181 aa13.82□□□□□ -0.2
CCNA1-201ENST00000255465 ZSCAN16Q9H4T2 348 aaPredicted RBP13.82□□□□□ -0.2
CCNA1-201ENST00000255465 ADRA2BP18089 450 aa13.81□□□□□ -0.2
CCNA1-201ENST00000255465 TMEM87AQ8NBN3 555 aa13.81□□□□□ -0.2
CCNA1-201ENST00000255465 PANK1Q8TE04 598 aa13.81□□□□□ -0.2
CCNA1-201ENST00000255465 ARHGEF1Q92888 912 aaKnown RBP13.81□□□□□ -0.2
CCNA1-201ENST00000255465 CALR3Q96L12 384 aaKnown RBP13.81□□□□□ -0.2
CCNA1-201ENST00000255465 IFT57Q9NWB7 429 aa13.81□□□□□ -0.2
CCNA1-201ENST00000255465 TMCO5BA8MYB1 307 aa13.8□□□□□ -0.2
CCNA1-201ENST00000255465 CD2BP2O95400 341 aaKnown RBP13.8□□□□□ -0.2
CCNA1-201ENST00000255465 A1BGP04217 495 aa13.8□□□□□ -0.2
CCNA1-201ENST00000255465 GNAI1P63096 354 aa13.8□□□□□ -0.2
CCNA1-201ENST00000255465 MTA1Q13330 715 aa13.8□□□□□ -0.2
CCNA1-201ENST00000255465 SETDB1Q15047 1291 aa13.8□□□□□ -0.2
CCNA1-201ENST00000255465 PPP2R5AQ15172 486 aa13.8□□□□□ -0.2
CCNA1-201ENST00000255465 ERC1Q8IUD2 1116 aa13.8□□□□□ -0.2
CCNA1-201ENST00000255465 SOS1Q07889 1333 aaPredicted RBP13.8□□□□□ -0.2
CCNA1-201ENST00000255465 A0A087WUV0 522 aaPredicted RBP13.8□□□□□ -0.2
CCNA1-201ENST00000255465 EIF3CLB5ME19 914 aaKnown RBP13.8□□□□□ -0.2
CCNA1-201ENST00000255465 EIF3JO75822 258 aaKnown RBP13.8□□□□□ -0.2
CCNA1-201ENST00000255465 ARID4AP29374 1257 aaPredicted RBP13.8□□□□□ -0.2
CCNA1-201ENST00000255465 ZC3H12AQ5D1E8 599 aaKnown RBP13.8□□□□□ -0.2
CCNA1-201ENST00000255465 ERCC4Q92889 916 aaPredicted RBP13.8□□□□□ -0.2
CCNA1-201ENST00000255465 SMARCE1Q969G3 411 aa13.8□□□□□ -0.2
CCNA1-201ENST00000255465 EIF3CQ99613 913 aaKnown RBP13.8□□□□□ -0.2
CCNA1-201ENST00000255465 NUCKS1Q9H1E3 243 aaKnown RBP13.8□□□□□ -0.2
CCNA1-201ENST00000255465 ST7Q9NRC1 585 aa13.8□□□□□ -0.2
CCNA1-201ENST00000255465 MBIPQ9NS73 344 aa13.8□□□□□ -0.2
CCNA1-201ENST00000255465 ZNF215Q9UL58 517 aaPredicted RBP13.8□□□□□ -0.2
CCNA1-201ENST00000255465 RFC4P35249 363 aa13.79□□□□□ -0.2
CCNA1-201ENST00000255465 PTGER2P43116 358 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms