RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 SERPINB2P05120 415 aa22.73■■□□□ 1.23
TRIM47-201ENST00000254816 TM4SF1P30408 202 aa22.73■■□□□ 1.23
TRIM47-201ENST00000254816 PRPF40BQ6NWY9 871 aaKnown RBP22.73■■□□□ 1.23
TRIM47-201ENST00000254816 MINPP1Q9UNW1 487 aa22.73■■□□□ 1.23
TRIM47-201ENST00000254816 RBM8AQ9Y5S9 174 aaKnown RBP22.73■■□□□ 1.23
TRIM47-201ENST00000254816 MCMDC2Q4G0Z9 681 aa22.73■■□□□ 1.23
TRIM47-201ENST00000254816 MAP4K1Q92918 833 aa22.73■■□□□ 1.23
TRIM47-201ENST00000254816 ST18O60284 1047 aa22.72■■□□□ 1.23
TRIM47-201ENST00000254816 RPS8P62241 208 aaKnown RBP22.72■■□□□ 1.23
TRIM47-201ENST00000254816 COL23A1Q86Y22 540 aaPredicted RBP22.72■■□□□ 1.23
TRIM47-201ENST00000254816 UPF3BQ9BZI7 483 aaKnown RBP22.72■■□□□ 1.23
TRIM47-201ENST00000254816 FOXD4L1Q9NU39 408 aa22.72■■□□□ 1.23
TRIM47-201ENST00000254816 ARID4AP29374 1257 aaPredicted RBP22.71■■□□□ 1.23
TRIM47-201ENST00000254816 KCNJ4P48050 445 aa22.71■■□□□ 1.23
TRIM47-201ENST00000254816 DDR1Q08345 913 aa22.71■■□□□ 1.23
TRIM47-201ENST00000254816 ZNF512BQ96KM6 892 aaPredicted RBP22.71■■□□□ 1.23
TRIM47-201ENST00000254816 RNF113AO15541 343 aaKnown RBP22.71■■□□□ 1.23
TRIM47-201ENST00000254816 CYP2E1P05181 493 aaPredicted RBP22.71■■□□□ 1.23
TRIM47-201ENST00000254816 BCAMP50895 628 aa22.71■■□□□ 1.23
TRIM47-201ENST00000254816 NECTIN1Q15223 517 aa22.7■■□□□ 1.22
TRIM47-201ENST00000254816 IL17RAQ96F46 866 aa22.7■■□□□ 1.22
TRIM47-201ENST00000254816 ZMYM1Q5SVZ6 1142 aa22.7■■□□□ 1.22
TRIM47-201ENST00000254816 SLC51AQ86UW1 340 aa22.7■■□□□ 1.22
TRIM47-201ENST00000254816 RGPD3A6NKT7 1758 aaPredicted RBP22.7■■□□□ 1.22
TRIM47-201ENST00000254816 RGPD4Q7Z3J3 1758 aa22.7■■□□□ 1.22
TRIM47-201ENST00000254816 UQCRFS1P1P0C7P4 283 aa22.69■■□□□ 1.22
TRIM47-201ENST00000254816 HMG20BQ9P0W2 317 aa22.69■■□□□ 1.22
TRIM47-201ENST00000254816 POLRMTO00411 1230 aaKnown RBP22.68■■□□□ 1.22
TRIM47-201ENST00000254816 CREB3L3Q68CJ9 461 aa22.68■■□□□ 1.22
TRIM47-201ENST00000254816 PIH1D3Q9NQM4 214 aaKnown RBP22.68■■□□□ 1.22
TRIM47-201ENST00000254816 HELLSQ9NRZ9 838 aa22.68■■□□□ 1.22
TRIM47-201ENST00000254816 M0R2C6 588 aa22.68■■□□□ 1.22
TRIM47-201ENST00000254816 HMGB2P26583 209 aaKnown RBP22.68■■□□□ 1.22
TRIM47-201ENST00000254816 ST5P78524 1137 aa22.68■■□□□ 1.22
TRIM47-201ENST00000254816 RASGRF1Q13972 1273 aa22.68■■□□□ 1.22
TRIM47-201ENST00000254816 ADCK5Q3MIX3 580 aa22.68■■□□□ 1.22
TRIM47-201ENST00000254816 MAST3O60307 1309 aa22.67■■□□□ 1.22
TRIM47-201ENST00000254816 EZH2Q15910 746 aaKnown RBP22.67■■□□□ 1.22
TRIM47-201ENST00000254816 NOL8Q76FK4 1167 aaKnown RBP22.67■■□□□ 1.22
TRIM47-201ENST00000254816 OSBP2Q969R2 916 aa22.67■■□□□ 1.22
TRIM47-201ENST00000254816 SLC27A2O14975 620 aa22.66■■□□□ 1.22
TRIM47-201ENST00000254816 HSP90AA1P07900 732 aaKnown RBP22.66■■□□□ 1.22
TRIM47-201ENST00000254816 CPA1P15085 419 aa22.66■■□□□ 1.22
TRIM47-201ENST00000254816 GYG1P46976 350 aa22.66■■□□□ 1.22
TRIM47-201ENST00000254816 EN1Q05925 392 aaPredicted RBP22.66■■□□□ 1.22
TRIM47-201ENST00000254816 VPS53Q5VIR6 699 aa22.66■■□□□ 1.22
TRIM47-201ENST00000254816 SPATA5Q8NB90 893 aa22.66■■□□□ 1.22
TRIM47-201ENST00000254816 IQSEC3Q9UPP2 1182 aaPredicted RBP22.66■■□□□ 1.22
TRIM47-201ENST00000254816 WASHC4Q2M389 1173 aa22.66■■□□□ 1.22
TRIM47-201ENST00000254816 TAF6LQ9Y6J9 622 aa22.66■■□□□ 1.22
TRIM47-201ENST00000254816 DOCK2Q92608 1830 aa22.66■■□□□ 1.22
TRIM47-201ENST00000254816 KCNB2Q92953 911 aa22.65■■□□□ 1.22
TRIM47-201ENST00000254816 PNPLA7Q6ZV29 1317 aa22.65■■□□□ 1.22
TRIM47-201ENST00000254816 UBE4AQ14139 1066 aa22.65■■□□□ 1.22
TRIM47-201ENST00000254816 CHMP5Q9NZZ3 219 aa22.65■■□□□ 1.22
TRIM47-201ENST00000254816 ANKRD31Q8N7Z5 1873 aa22.64■■□□□ 1.22
TRIM47-201ENST00000254816 IDH1O75874 414 aaKnown RBP22.64■■□□□ 1.22
TRIM47-201ENST00000254816 KLRK1P26718 216 aa22.64■■□□□ 1.22
TRIM47-201ENST00000254816 TICAM2Q86XR7 235 aa22.64■■□□□ 1.22
TRIM47-201ENST00000254816 JAKMIP1Q96N16 626 aaKnown RBP22.64■■□□□ 1.22
TRIM47-201ENST00000254816 CASTP20810 708 aaKnown RBP22.64■■□□□ 1.21
TRIM47-201ENST00000254816 GRAPQ13588 217 aa22.64■■□□□ 1.21
TRIM47-201ENST00000254816 TTF1Q15361 905 aaPredicted RBP22.64■■□□□ 1.21
TRIM47-201ENST00000254816 GRAPLQ8TC17 118 aaPredicted RBP22.64■■□□□ 1.21
TRIM47-201ENST00000254816 RPGRQ92834 1020 aaKnown RBP22.64■■□□□ 1.21
TRIM47-201ENST00000254816 MYH13Q9UKX3 1938 aa22.63■■□□□ 1.21
TRIM47-201ENST00000254816 LRRFIP1Q32MZ4 808 aaKnown RBP22.63■■□□□ 1.21
TRIM47-201ENST00000254816 PUS7LQ9H0K6 701 aaKnown RBP22.63■■□□□ 1.21
TRIM47-201ENST00000254816 ZFYP08048 801 aaPredicted RBP22.62■■□□□ 1.21
TRIM47-201ENST00000254816 ZKSCAN1P17029 563 aaPredicted RBP22.62■■□□□ 1.21
TRIM47-201ENST00000254816 SLC9C2Q5TAH2 1124 aa22.62■■□□□ 1.21
TRIM47-201ENST00000254816 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.62■■□□□ 1.21
TRIM47-201ENST00000254816 COL9A3Q14050 684 aaPredicted RBP22.62■■□□□ 1.21
TRIM47-201ENST00000254816 MSL1Q68DK7 614 aa22.62■■□□□ 1.21
TRIM47-201ENST00000254816 ANO8Q9HCE9 1232 aaPredicted RBP22.62■■□□□ 1.21
TRIM47-201ENST00000254816 WWC3Q9ULE0 1092 aa22.62■■□□□ 1.21
TRIM47-201ENST00000254816 ADD2P35612 726 aa22.61■■□□□ 1.21
TRIM47-201ENST00000254816 NLGN1Q8N2Q7 840 aa22.61■■□□□ 1.21
TRIM47-201ENST00000254816 APPBP2Q92624 585 aa22.61■■□□□ 1.21
TRIM47-201ENST00000254816 CAMKK2Q96RR4 588 aa22.61■■□□□ 1.21
TRIM47-201ENST00000254816 HSPD1P10809 573 aaKnown RBP22.61■■□□□ 1.21
TRIM47-201ENST00000254816 CRY2Q49AN0 593 aa22.61■■□□□ 1.21
TRIM47-201ENST00000254816 ANKRD2Q9GZV1 360 aa22.61■■□□□ 1.21
TRIM47-201ENST00000254816 RNF20Q5VTR2 975 aa22.6■■□□□ 1.21
TRIM47-201ENST00000254816 FLAD1Q8NFF5 587 aa22.6■■□□□ 1.21
TRIM47-201ENST00000254816 FAM84BQ96KN1 310 aaPredicted RBP22.6■■□□□ 1.21
TRIM47-201ENST00000254816 U3KPZ7 1027 aaPredicted RBP22.6■■□□□ 1.21
TRIM47-201ENST00000254816 NRXN2Q9P2S2 1712 aa22.6■■□□□ 1.21
TRIM47-201ENST00000254816 LAMA4Q16363 1823 aa22.6■■□□□ 1.21
TRIM47-201ENST00000254816 DDIT3P35638 169 aa22.6■■□□□ 1.21
TRIM47-201ENST00000254816 TMX3Q96JJ7 454 aa22.6■■□□□ 1.21
TRIM47-201ENST00000254816 TTC14Q96N46 770 aa22.6■■□□□ 1.21
TRIM47-201ENST00000254816 LARP6Q9BRS8 491 aaKnown RBP22.6■■□□□ 1.21
TRIM47-201ENST00000254816 ZNF804BA4D1E1 1349 aa22.6■■□□□ 1.21
TRIM47-201ENST00000254816 CAVIN4Q5BKX8 364 aa22.59■■□□□ 1.21
TRIM47-201ENST00000254816 VPS37DQ86XT2 251 aa22.59■■□□□ 1.21
TRIM47-201ENST00000254816 ZNF532Q9HCE3 1301 aa22.59■■□□□ 1.21
TRIM47-201ENST00000254816 COL1A1P02452 1464 aaPredicted RBP22.59■■□□□ 1.21
TRIM47-201ENST00000254816 A0A0G2JLW4 131 aa22.59■■□□□ 1.21
TRIM47-201ENST00000254816 PDE6AP16499 860 aa22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms