RNA–Protein interactions for RNA: ENST00000254231.4

LIN28A-201, Transcript of lin-28 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28A, Length 3,458 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28A-201ENST00000254231 RASGRF1Q13972 1273 aa13.93□□□□□ -0.18
LIN28A-201ENST00000254231 GPHNQ9NQX3 736 aaPredicted RBP13.93□□□□□ -0.18
LIN28A-201ENST00000254231 ABCC12Q96J65 1359 aa13.93□□□□□ -0.18
LIN28A-201ENST00000254231 SMIM22K7EJ46 135 aa13.93□□□□□ -0.18
LIN28A-201ENST00000254231 ATP2B1P20020 1258 aa13.93□□□□□ -0.18
LIN28A-201ENST00000254231 CYP7A1P22680 504 aa13.93□□□□□ -0.18
LIN28A-201ENST00000254231 TDO2P48775 406 aa13.93□□□□□ -0.18
LIN28A-201ENST00000254231 SCNN1DP51172 638 aa13.93□□□□□ -0.18
LIN28A-201ENST00000254231 PICALMQ13492 652 aa13.93□□□□□ -0.18
LIN28A-201ENST00000254231 RABL6Q3YEC7 729 aaPredicted RBP13.93□□□□□ -0.18
LIN28A-201ENST00000254231 DBNDD1Q9H9R9 158 aa13.93□□□□□ -0.18
LIN28A-201ENST00000254231 COL16A1Q07092 1604 aaPredicted RBP13.92□□□□□ -0.18
LIN28A-201ENST00000254231 CYP2D7A0A087X1C5 515 aa13.92□□□□□ -0.18
LIN28A-201ENST00000254231 SGSM2O43147 1006 aa13.92□□□□□ -0.18
LIN28A-201ENST00000254231 PIH1D3Q9NQM4 214 aaKnown RBP13.92□□□□□ -0.18
LIN28A-201ENST00000254231 STK32BQ9NY57 414 aa13.92□□□□□ -0.18
LIN28A-201ENST00000254231 DENND2AQ9ULE3 1009 aa13.92□□□□□ -0.18
LIN28A-201ENST00000254231 MINPP1Q9UNW1 487 aa13.92□□□□□ -0.18
LIN28A-201ENST00000254231 RIPOR2Q9Y4F9 1068 aa13.92□□□□□ -0.18
LIN28A-201ENST00000254231 PUM3Q15397 648 aaKnown RBP13.92□□□□□ -0.18
LIN28A-201ENST00000254231 DIXDC1Q155Q3 683 aa13.92□□□□□ -0.18
LIN28A-201ENST00000254231 NFKBIBQ15653 356 aa13.92□□□□□ -0.18
LIN28A-201ENST00000254231 OSBP2Q969R2 916 aa13.92□□□□□ -0.18
LIN28A-201ENST00000254231 DISP2A7MBM2 1401 aa13.92□□□□□ -0.18
LIN28A-201ENST00000254231 SLURP2P0DP57 97 aa13.91□□□□□ -0.18
LIN28A-201ENST00000254231 AATFQ9NY61 560 aaKnown RBP eCLIP13.91□□□□□ -0.18
LIN28A-201ENST00000254231 ZNF532Q9HCE3 1301 aa13.91□□□□□ -0.18
LIN28A-201ENST00000254231 MBD4O95243 580 aa13.91□□□□□ -0.18
LIN28A-201ENST00000254231 CYP2E1P05181 493 aaPredicted RBP13.91□□□□□ -0.18
LIN28A-201ENST00000254231 MCTP1Q6DN14 999 aa13.91□□□□□ -0.18
LIN28A-201ENST00000254231 HMG20BQ9P0W2 317 aa13.91□□□□□ -0.18
LIN28A-201ENST00000254231 CACNB3P54284 484 aa13.91□□□□□ -0.18
LIN28A-201ENST00000254231 DDR1Q08345 913 aa13.91□□□□□ -0.18
LIN28A-201ENST00000254231 SPATA5Q8NB90 893 aa13.91□□□□□ -0.18
LIN28A-201ENST00000254231 NYXQ9GZU5 481 aa13.91□□□□□ -0.18
LIN28A-201ENST00000254231 FAM208AQ9UK61 1670 aaKnown RBP13.9□□□□□ -0.18
LIN28A-201ENST00000254231 DYNLL1P63167 89 aaKnown RBP13.9□□□□□ -0.18
LIN28A-201ENST00000254231 TTC41PQ6P2S7 1318 aa13.9□□□□□ -0.18
LIN28A-201ENST00000254231 K7ELQ4 463 aaPredicted RBP13.9□□□□□ -0.18
LIN28A-201ENST00000254231 M0R2C6 588 aa13.9□□□□□ -0.18
LIN28A-201ENST00000254231 C21orf2O43822 256 aa13.9□□□□□ -0.18
LIN28A-201ENST00000254231 ATP5JP18859 108 aa13.9□□□□□ -0.18
LIN28A-201ENST00000254231 PRDX5P30044 214 aa13.9□□□□□ -0.18
LIN28A-201ENST00000254231 PDRG1Q9NUG6 133 aa13.9□□□□□ -0.18
LIN28A-201ENST00000254231 SAP30BPQ9UHR5 308 aaKnown RBP13.9□□□□□ -0.18
LIN28A-201ENST00000254231 LMO7Q8WWI1 1683 aa13.9□□□□□ -0.18
LIN28A-201ENST00000254231 SSFA2P28290 1259 aa13.89□□□□□ -0.19
LIN28A-201ENST00000254231 BAG6P46379 1132 aa13.89□□□□□ -0.19
LIN28A-201ENST00000254231 CTDSPL2Q05D32 466 aa13.89□□□□□ -0.19
LIN28A-201ENST00000254231 MCMDC2Q4G0Z9 681 aa13.89□□□□□ -0.19
LIN28A-201ENST00000254231 NFXL1Q6ZNB6 911 aa13.89□□□□□ -0.19
LIN28A-201ENST00000254231 DZIP1Q86YF9 867 aaKnown RBP13.89□□□□□ -0.19
LIN28A-201ENST00000254231 ZSCAN29Q8IWY8 852 aaPredicted RBP13.89□□□□□ -0.19
LIN28A-201ENST00000254231 LPIN2Q92539 896 aa13.89□□□□□ -0.19
LIN28A-201ENST00000254231 MYL10Q9BUA6 226 aa13.89□□□□□ -0.19
LIN28A-201ENST00000254231 STAP2Q9UGK3 403 aa13.89□□□□□ -0.19
LIN28A-201ENST00000254231 BCS1LQ9Y276 419 aa13.89□□□□□ -0.19
LIN28A-201ENST00000254231 USP42Q9H9J4 1324 aaKnown RBP13.89□□□□□ -0.19
LIN28A-201ENST00000254231 GTF2IP78347 998 aa13.89□□□□□ -0.19
LIN28A-201ENST00000254231 CREB3L3Q68CJ9 461 aa13.89□□□□□ -0.19
LIN28A-201ENST00000254231 BLOC1S2Q6QNY1 142 aa13.89□□□□□ -0.19
LIN28A-201ENST00000254231 KBTBD3Q8NAB2 608 aa13.89□□□□□ -0.19
LIN28A-201ENST00000254231 BRF1Q92994 677 aa13.89□□□□□ -0.19
LIN28A-201ENST00000254231 SNX14Q9Y5W7 946 aa13.89□□□□□ -0.19
LIN28A-201ENST00000254231 GPAA1O43292 621 aa13.89□□□□□ -0.19
LIN28A-201ENST00000254231 NCOA5Q9HCD5 579 aaKnown RBP13.89□□□□□ -0.19
LIN28A-201ENST00000254231 hCG_1642624A0A1W2PR95 340 aa13.88□□□□□ -0.19
LIN28A-201ENST00000254231 CSF1RP07333 972 aa13.88□□□□□ -0.19
LIN28A-201ENST00000254231 TCP10Q12799 353 aa13.88□□□□□ -0.19
LIN28A-201ENST00000254231 TRIM28Q13263 835 aaKnown RBP13.88□□□□□ -0.19
LIN28A-201ENST00000254231 RALYLQ86SE5 291 aaKnown RBP13.88□□□□□ -0.19
LIN28A-201ENST00000254231 CMTR1Q8N1G2 835 aaKnown RBP13.88□□□□□ -0.19
LIN28A-201ENST00000254231 CYP46A1Q9Y6A2 500 aa13.88□□□□□ -0.19
LIN28A-201ENST00000254231 NHSL1Q5SYE7 1610 aa13.88□□□□□ -0.19
LIN28A-201ENST00000254231 HIBADHP31937 336 aaKnown RBP13.88□□□□□ -0.19
LIN28A-201ENST00000254231 AK2P54819 239 aa13.88□□□□□ -0.19
LIN28A-201ENST00000254231 MAP3K12Q12852 859 aa13.88□□□□□ -0.19
LIN28A-201ENST00000254231 FAM173BQ6P4H8 233 aa13.88□□□□□ -0.19
LIN28A-201ENST00000254231 NUP133Q8WUM0 1156 aa13.88□□□□□ -0.19
LIN28A-201ENST00000254231 GNL3LQ9NVN8 582 aaKnown RBP13.88□□□□□ -0.19
LIN28A-201ENST00000254231 BAZ2BQ9UIF8 2168 aaKnown RBP13.88□□□□□ -0.19
LIN28A-201ENST00000254231 TMX3Q96JJ7 454 aa13.88□□□□□ -0.19
LIN28A-201ENST00000254231 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.88□□□□□ -0.19
LIN28A-201ENST00000254231 SLC4A4Q9Y6R1 1079 aa13.88□□□□□ -0.19
LIN28A-201ENST00000254231 CCDC171Q6TFL3 1326 aa13.88□□□□□ -0.19
LIN28A-201ENST00000254231 RNF113AO15541 343 aaKnown RBP13.87□□□□□ -0.19
LIN28A-201ENST00000254231 EIF6P56537 245 aaKnown RBP13.87□□□□□ -0.19
LIN28A-201ENST00000254231 C2CD5Q86YS7 1000 aa13.87□□□□□ -0.19
LIN28A-201ENST00000254231 KIAA0825Q8IV33 1275 aa13.87□□□□□ -0.19
LIN28A-201ENST00000254231 KIF2CQ99661 725 aa13.87□□□□□ -0.19
LIN28A-201ENST00000254231 HAUS7Q99871 368 aa13.87□□□□□ -0.19
LIN28A-201ENST00000254231 ZC3H12CQ9C0D7 883 aaKnown RBP13.87□□□□□ -0.19
LIN28A-201ENST00000254231 NAPBQ9H115 298 aa13.87□□□□□ -0.19
LIN28A-201ENST00000254231 UTYO14607 1347 aa13.87□□□□□ -0.19
LIN28A-201ENST00000254231 RANBP6O60518 1105 aaKnown RBP13.87□□□□□ -0.19
LIN28A-201ENST00000254231 PRKG1Q13976 671 aa13.87□□□□□ -0.19
LIN28A-201ENST00000254231 RABEP1Q15276 862 aa13.87□□□□□ -0.19
LIN28A-201ENST00000254231 RNF20Q5VTR2 975 aa13.87□□□□□ -0.19
LIN28A-201ENST00000254231 KCNQ5Q9NR82 932 aa13.87□□□□□ -0.19
LIN28A-201ENST00000254231 KCPQ6ZWJ8 1503 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms