RNA–Protein interactions for RNA: ENST00000254109.9

CLUHP3-201, Transcript of clustered mitochondria homolog pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CLUHP3, Length 1,812 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLUHP3-201ENST00000254109 NMIQ13287 307 aaPredicted RBP13.66□□□□□ -0.22
CLUHP3-201ENST00000254109 PKP1Q13835 747 aa13.66□□□□□ -0.22
CLUHP3-201ENST00000254109 RIC1Q4ADV7 1423 aa13.66□□□□□ -0.22
CLUHP3-201ENST00000254109 LDHAL6AQ6ZMR3 332 aa13.66□□□□□ -0.22
CLUHP3-201ENST00000254109 BRPF3Q9ULD4 1205 aa13.66□□□□□ -0.22
CLUHP3-201ENST00000254109 RTL9Q8NET4 1388 aa13.66□□□□□ -0.22
CLUHP3-201ENST00000254109 EYA2O00167 538 aa13.65□□□□□ -0.22
CLUHP3-201ENST00000254109 CRY2Q49AN0 593 aa13.65□□□□□ -0.22
CLUHP3-201ENST00000254109 PRPF40BQ6NWY9 871 aaKnown RBP13.65□□□□□ -0.22
CLUHP3-201ENST00000254109 SLC51AQ86UW1 340 aa13.65□□□□□ -0.22
CLUHP3-201ENST00000254109 RASEFQ8IZ41 740 aa13.65□□□□□ -0.22
CLUHP3-201ENST00000254109 SNRKQ9NRH2 765 aa13.65□□□□□ -0.22
CLUHP3-201ENST00000254109 LIMCH1Q9UPQ0 1083 aa13.65□□□□□ -0.22
CLUHP3-201ENST00000254109 DDX49Q9Y6V7 483 aaKnown RBP13.65□□□□□ -0.22
CLUHP3-201ENST00000254109 KLRG2A4D1S0 409 aaPredicted RBP13.64□□□□□ -0.23
CLUHP3-201ENST00000254109 CASTP20810 708 aaKnown RBP13.64□□□□□ -0.23
CLUHP3-201ENST00000254109 KLHL40Q2TBA0 621 aa13.64□□□□□ -0.23
CLUHP3-201ENST00000254109 RNF20Q5VTR2 975 aa13.64□□□□□ -0.23
CLUHP3-201ENST00000254109 DDX46Q7L014 1031 aaKnown RBP13.64□□□□□ -0.23
CLUHP3-201ENST00000254109 ANKRD18AQ8IVF6 992 aa13.64□□□□□ -0.23
CLUHP3-201ENST00000254109 RPGRQ92834 1020 aaKnown RBP13.64□□□□□ -0.23
CLUHP3-201ENST00000254109 KCNB2Q92953 911 aa13.64□□□□□ -0.23
CLUHP3-201ENST00000254109 FAM227BQ96M60 508 aa13.64□□□□□ -0.23
CLUHP3-201ENST00000254109 TTC14Q96N46 770 aa13.64□□□□□ -0.23
CLUHP3-201ENST00000254109 TM6SF1Q9BZW5 370 aa13.64□□□□□ -0.23
CLUHP3-201ENST00000254109 DBNLQ9UJU6 430 aaKnown RBP13.64□□□□□ -0.23
CLUHP3-201ENST00000254109 ZDHHC9Q9Y397 364 aa13.64□□□□□ -0.23
CLUHP3-201ENST00000254109 COL11A2P13942 1736 aaPredicted RBP13.64□□□□□ -0.23
CLUHP3-201ENST00000254109 IGHMBP2P38935 993 aaKnown RBP13.64□□□□□ -0.23
CLUHP3-201ENST00000254109 IL15P40933 162 aaPredicted RBP13.64□□□□□ -0.23
CLUHP3-201ENST00000254109 MRE11P49959 708 aa13.64□□□□□ -0.23
CLUHP3-201ENST00000254109 NECTIN1Q15223 517 aa13.64□□□□□ -0.23
CLUHP3-201ENST00000254109 CDC5LQ99459 802 aaKnown RBP13.64□□□□□ -0.23
CLUHP3-201ENST00000254109 SGIP1Q9BQI5 828 aa13.64□□□□□ -0.23
CLUHP3-201ENST00000254109 CNNM1Q9NRU3 951 aa13.64□□□□□ -0.23
CLUHP3-201ENST00000254109 RIPOR2Q9Y4F9 1068 aa13.64□□□□□ -0.23
CLUHP3-201ENST00000254109 CYP46A1Q9Y6A2 500 aa13.64□□□□□ -0.23
CLUHP3-201ENST00000254109 CIAO1O76071 339 aa13.63□□□□□ -0.23
CLUHP3-201ENST00000254109 SRGNP10124 158 aa13.63□□□□□ -0.23
CLUHP3-201ENST00000254109 PSMA5P28066 241 aa13.63□□□□□ -0.23
CLUHP3-201ENST00000254109 POLD1P28340 1107 aa13.63□□□□□ -0.23
CLUHP3-201ENST00000254109 CHRNA5P30532 468 aa13.63□□□□□ -0.23
CLUHP3-201ENST00000254109 PDE6BP35913 854 aa13.63□□□□□ -0.23
CLUHP3-201ENST00000254109 AK2P54819 239 aa13.63□□□□□ -0.23
CLUHP3-201ENST00000254109 VPS53Q5VIR6 699 aa13.63□□□□□ -0.23
CLUHP3-201ENST00000254109 MAP4K1Q92918 833 aa13.63□□□□□ -0.23
CLUHP3-201ENST00000254109 JAKMIP1Q96N16 626 aaKnown RBP13.63□□□□□ -0.23
CLUHP3-201ENST00000254109 MPHOSPH8Q99549 860 aa13.63□□□□□ -0.23
CLUHP3-201ENST00000254109 GPR108Q9NPR9 543 aa13.63□□□□□ -0.23
CLUHP3-201ENST00000254109 PDRG1Q9NUG6 133 aa13.63□□□□□ -0.23
CLUHP3-201ENST00000254109 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.63□□□□□ -0.23
CLUHP3-201ENST00000254109 RBM8AQ9Y5S9 174 aaKnown RBP13.63□□□□□ -0.23
CLUHP3-201ENST00000254109 RFX7Q2KHR2 1363 aa13.63□□□□□ -0.23
CLUHP3-201ENST00000254109 BRD1O95696 1058 aa13.62□□□□□ -0.23
CLUHP3-201ENST00000254109 PTGER2P43116 358 aa13.62□□□□□ -0.23
CLUHP3-201ENST00000254109 RPS8P62241 208 aaKnown RBP13.62□□□□□ -0.23
CLUHP3-201ENST00000254109 C2CD5Q86YS7 1000 aa13.62□□□□□ -0.23
CLUHP3-201ENST00000254109 HELBQ8NG08 1087 aaPredicted RBP13.62□□□□□ -0.23
CLUHP3-201ENST00000254109 RBM17Q96I25 401 aaKnown RBP13.62□□□□□ -0.23
CLUHP3-201ENST00000254109 HAUS7Q99871 368 aa13.62□□□□□ -0.23
CLUHP3-201ENST00000254109 DBNDD2Q9BQY9 259 aa13.62□□□□□ -0.23
CLUHP3-201ENST00000254109 ZSWIM6Q9HCJ5 1215 aa13.62□□□□□ -0.23
CLUHP3-201ENST00000254109 LRP5O75197 1615 aa13.62□□□□□ -0.23
CLUHP3-201ENST00000254109 A0A0D9SFI3 127 aa13.62□□□□□ -0.23
CLUHP3-201ENST00000254109 GRAPQ13588 217 aa13.62□□□□□ -0.23
CLUHP3-201ENST00000254109 CREB3L3Q68CJ9 461 aa13.62□□□□□ -0.23
CLUHP3-201ENST00000254109 GRAPLQ8TC17 118 aaPredicted RBP13.62□□□□□ -0.23
CLUHP3-201ENST00000254109 ZSCAN31Q96LW9 406 aaPredicted RBP13.62□□□□□ -0.23
CLUHP3-201ENST00000254109 LMBRD1Q9NUN5 540 aa13.62□□□□□ -0.23
CLUHP3-201ENST00000254109 C10orf71Q711Q0 1435 aa13.61□□□□□ -0.23
CLUHP3-201ENST00000254109 WDR33Q9C0J8 1336 aaKnown RBP13.61□□□□□ -0.23
CLUHP3-201ENST00000254109 CACNA1SQ13698 1873 aa13.61□□□□□ -0.23
CLUHP3-201ENST00000254109 MED23Q9ULK4 1368 aa13.61□□□□□ -0.23
CLUHP3-201ENST00000254109 PRPF40AO75400 957 aaKnown RBP13.61□□□□□ -0.23
CLUHP3-201ENST00000254109 NCLP19338 710 aaKnown RBP13.61□□□□□ -0.23
CLUHP3-201ENST00000254109 METTL24Q5JXM2 366 aa13.61□□□□□ -0.23
CLUHP3-201ENST00000254109 RUFY3Q7L099 469 aa13.61□□□□□ -0.23
CLUHP3-201ENST00000254109 ZNF622Q969S3 477 aaKnown RBP eCLIP13.61□□□□□ -0.23
CLUHP3-201ENST00000254109 NEUROD6Q96NK8 337 aa13.61□□□□□ -0.23
CLUHP3-201ENST00000254109 DNAJC2Q99543 621 aaKnown RBP13.61□□□□□ -0.23
CLUHP3-201ENST00000254109 BSDC1Q9NW68 430 aaPredicted RBP13.61□□□□□ -0.23
CLUHP3-201ENST00000254109 FBXO3Q9UK99 471 aa13.61□□□□□ -0.23
CLUHP3-201ENST00000254109 SNAP23O00161 211 aa13.6□□□□□ -0.23
CLUHP3-201ENST00000254109 TAF5LO75529 589 aa13.6□□□□□ -0.23
CLUHP3-201ENST00000254109 XRCC6P12956 609 aaKnown RBP eCLIP13.6□□□□□ -0.23
CLUHP3-201ENST00000254109 NPR1P16066 1061 aa13.6□□□□□ -0.23
CLUHP3-201ENST00000254109 HOXA10P31260 410 aaPredicted RBP13.6□□□□□ -0.23
CLUHP3-201ENST00000254109 FOXD4L5Q5VV16 416 aaPredicted RBP13.6□□□□□ -0.23
CLUHP3-201ENST00000254109 FOXD4L4Q8WXT5 416 aaPredicted RBP13.6□□□□□ -0.23
CLUHP3-201ENST00000254109 GRPEL1Q9HAV7 217 aa13.6□□□□□ -0.23
CLUHP3-201ENST00000254109 SH2B1Q9NRF2 756 aaPredicted RBP13.6□□□□□ -0.23
CLUHP3-201ENST00000254109 HMG20BQ9P0W2 317 aa13.6□□□□□ -0.23
CLUHP3-201ENST00000254109 CEP126Q9P2H0 1117 aa13.6□□□□□ -0.23
CLUHP3-201ENST00000254109 PPP1R1BQ9UD71 204 aaPredicted RBP13.6□□□□□ -0.23
CLUHP3-201ENST00000254109 H0YIN7 160 aa13.6□□□□□ -0.23
CLUHP3-201ENST00000254109 SLC27A2O14975 620 aa13.6□□□□□ -0.23
CLUHP3-201ENST00000254109 PRKCSHP14314 528 aaPredicted RBP13.6□□□□□ -0.23
CLUHP3-201ENST00000254109 CHRNDQ07001 517 aa13.6□□□□□ -0.23
CLUHP3-201ENST00000254109 ADCK5Q3MIX3 580 aa13.6□□□□□ -0.23
CLUHP3-201ENST00000254109 TICAM2Q86XR7 235 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms