RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 LUZP1Q86V48 1076 aa16.95■□□□□ 0.3
HIF3A-202ENST00000244303 NSUN7Q8NE18 718 aaKnown RBP16.95■□□□□ 0.3
HIF3A-202ENST00000244303 MAP7D2Q96T17 732 aa16.95■□□□□ 0.3
HIF3A-202ENST00000244303 LLPHQ9BRT6 129 aaKnown RBP16.95■□□□□ 0.3
HIF3A-202ENST00000244303 PUS3Q9BZE2 481 aaKnown RBP16.95■□□□□ 0.3
HIF3A-202ENST00000244303 CTDNEP1O95476 244 aa16.95■□□□□ 0.3
HIF3A-202ENST00000244303 ANO6Q4KMQ2 910 aa16.95■□□□□ 0.3
HIF3A-202ENST00000244303 RBM43Q6ZSC3 357 aaKnown RBP16.95■□□□□ 0.3
HIF3A-202ENST00000244303 SPC24Q8NBT2 197 aa16.95■□□□□ 0.3
HIF3A-202ENST00000244303 E7EWF7 191 aa16.94■□□□□ 0.3
HIF3A-202ENST00000244303 FOSBP53539 338 aa16.94■□□□□ 0.3
HIF3A-202ENST00000244303 EXOSC10Q01780 885 aaKnown RBP16.94■□□□□ 0.3
HIF3A-202ENST00000244303 DNAJC10Q8IXB1 793 aa16.94■□□□□ 0.3
HIF3A-202ENST00000244303 ATG3Q9NT62 314 aa16.94■□□□□ 0.3
HIF3A-202ENST00000244303 RNF113AO15541 343 aaKnown RBP16.94■□□□□ 0.3
HIF3A-202ENST00000244303 CIAO1O76071 339 aa16.94■□□□□ 0.3
HIF3A-202ENST00000244303 CCT2P78371 535 aaKnown RBP16.94■□□□□ 0.3
HIF3A-202ENST00000244303 ISCA1Q9BUE6 129 aa16.94■□□□□ 0.3
HIF3A-202ENST00000244303 TEX13AQ9BXU3 409 aaPredicted RBP16.94■□□□□ 0.3
HIF3A-202ENST00000244303 AGXT2Q9BYV1 514 aa16.94■□□□□ 0.3
HIF3A-202ENST00000244303 KCNF1Q9H3M0 494 aa16.94■□□□□ 0.3
HIF3A-202ENST00000244303 NWD2Q9ULI1 1742 aa16.93■□□□□ 0.3
HIF3A-202ENST00000244303 PTPDC1A2A3K4 754 aa16.93■□□□□ 0.3
HIF3A-202ENST00000244303 M0R2C6 588 aa16.93■□□□□ 0.3
HIF3A-202ENST00000244303 CEBPZQ03701 1054 aaKnown RBP16.93■□□□□ 0.3
HIF3A-202ENST00000244303 TICAM2Q86XR7 235 aa16.93■□□□□ 0.3
HIF3A-202ENST00000244303 CBX8Q9HC52 389 aa16.93■□□□□ 0.3
HIF3A-202ENST00000244303 CFAP45Q9UL16 551 aa16.93■□□□□ 0.3
HIF3A-202ENST00000244303 TCIRG1Q13488 830 aa16.93■□□□□ 0.3
HIF3A-202ENST00000244303 ZNF330Q9Y3S2 320 aaPredicted RBP16.93■□□□□ 0.3
HIF3A-202ENST00000244303 DYNC1I1O14576 645 aa16.92■□□□□ 0.3
HIF3A-202ENST00000244303 CHST3Q7LGC8 479 aa16.92■□□□□ 0.3
HIF3A-202ENST00000244303 NCOA5Q9HCD5 579 aaKnown RBP16.92■□□□□ 0.3
HIF3A-202ENST00000244303 SPTLC3Q9NUV7 552 aa16.92■□□□□ 0.3
HIF3A-202ENST00000244303 NAP1L2Q9ULW6 460 aaPredicted RBP16.92■□□□□ 0.3
HIF3A-202ENST00000244303 MYH7P12883 1935 aa16.92■□□□□ 0.3
HIF3A-202ENST00000244303 ADD1P35611 737 aaKnown RBP16.91■□□□□ 0.3
HIF3A-202ENST00000244303 HMGN5P82970 282 aaKnown RBP16.91■□□□□ 0.3
HIF3A-202ENST00000244303 FKBP4Q02790 459 aaKnown RBP eCLIP16.91■□□□□ 0.3
HIF3A-202ENST00000244303 NAA16Q6N069 864 aaPredicted RBP16.91■□□□□ 0.3
HIF3A-202ENST00000244303 CEP126Q9P2H0 1117 aa16.91■□□□□ 0.3
HIF3A-202ENST00000244303 DISP2A7MBM2 1401 aa16.91■□□□□ 0.3
HIF3A-202ENST00000244303 GOLGA6L6A8MZA4 724 aa16.91■□□□□ 0.3
HIF3A-202ENST00000244303 TTLL5Q6EMB2 1281 aa16.91■□□□□ 0.3
HIF3A-202ENST00000244303 OSBP2Q969R2 916 aa16.91■□□□□ 0.3
HIF3A-202ENST00000244303 FTOQ9C0B1 505 aaKnown RBP eCLIP16.91■□□□□ 0.3
HIF3A-202ENST00000244303 PPFIA3O75145 1194 aa16.9■□□□□ 0.3
HIF3A-202ENST00000244303 TPM3P06753 285 aa16.9■□□□□ 0.3
HIF3A-202ENST00000244303 CCDC57Q2TAC2 916 aa16.9■□□□□ 0.3
HIF3A-202ENST00000244303 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.9■□□□□ 0.3
HIF3A-202ENST00000244303 PYCARDQ9ULZ3 195 aa16.9■□□□□ 0.3
HIF3A-202ENST00000244303 SALL1Q9NSC2 1324 aa16.9■□□□□ 0.3
HIF3A-202ENST00000244303 COL14A1Q05707 1796 aaKnown RBP16.9■□□□□ 0.3
HIF3A-202ENST00000244303 STARD3NLO95772 234 aa16.9■□□□□ 0.3
HIF3A-202ENST00000244303 PDIA3P30101 505 aaKnown RBP16.9■□□□□ 0.3
HIF3A-202ENST00000244303 ADORA1P30542 326 aa16.9■□□□□ 0.3
HIF3A-202ENST00000244303 KIAA1524Q8TCG1 905 aa16.9■□□□□ 0.3
HIF3A-202ENST00000244303 TRIM28Q13263 835 aaKnown RBP16.89■□□□□ 0.29
HIF3A-202ENST00000244303 TTC39AQ5SRH9 613 aa16.89■□□□□ 0.29
HIF3A-202ENST00000244303 KIF6Q6ZMV9 814 aa16.89■□□□□ 0.29
HIF3A-202ENST00000244303 CCDC85AQ96PX6 553 aaPredicted RBP16.89■□□□□ 0.29
HIF3A-202ENST00000244303 DNAJC25Q9H1X3 360 aa16.89■□□□□ 0.29
HIF3A-202ENST00000244303 KIF3AQ9Y496 699 aa16.89■□□□□ 0.29
HIF3A-202ENST00000244303 CCDC158Q5M9N0 1113 aa16.89■□□□□ 0.29
HIF3A-202ENST00000244303 GORABQ5T7V8 394 aa16.89■□□□□ 0.29
HIF3A-202ENST00000244303 MYRIPQ8NFW9 859 aa16.89■□□□□ 0.29
HIF3A-202ENST00000244303 ZNF274Q96GC6 653 aaPredicted RBP16.89■□□□□ 0.29
HIF3A-202ENST00000244303 XAGE2Q96GT9 111 aa16.89■□□□□ 0.29
HIF3A-202ENST00000244303 EXOC5O00471 708 aa16.88■□□□□ 0.29
HIF3A-202ENST00000244303 ZNF165P49910 485 aa16.88■□□□□ 0.29
HIF3A-202ENST00000244303 GUCY1B3Q02153 619 aa16.88■□□□□ 0.29
HIF3A-202ENST00000244303 TDRD7Q8NHU6 1098 aaKnown RBP16.88■□□□□ 0.29
HIF3A-202ENST00000244303 USP28Q96RU2 1077 aa16.88■□□□□ 0.29
HIF3A-202ENST00000244303 ARID3AQ99856 593 aa16.88■□□□□ 0.29
HIF3A-202ENST00000244303 RCOR1Q9UKL0 485 aa16.88■□□□□ 0.29
HIF3A-202ENST00000244303 ITGB4P16144 1822 aa16.88■□□□□ 0.29
HIF3A-202ENST00000244303 PTGS1P23219 599 aa16.87■□□□□ 0.29
HIF3A-202ENST00000244303 PRIMPOLQ96LW4 560 aa16.87■□□□□ 0.29
HIF3A-202ENST00000244303 DDX60Q8IY21 1712 aaKnown RBP16.87■□□□□ 0.29
HIF3A-202ENST00000244303 FOXP2O15409 715 aa16.87■□□□□ 0.29
HIF3A-202ENST00000244303 SCARF1Q14162 830 aa16.87■□□□□ 0.29
HIF3A-202ENST00000244303 WASHC4Q2M389 1173 aa16.87■□□□□ 0.29
HIF3A-202ENST00000244303 MTERF4Q7Z6M4 381 aaKnown RBP16.87■□□□□ 0.29
HIF3A-202ENST00000244303 CCAR1Q8IX12 1150 aaKnown RBP16.87■□□□□ 0.29
HIF3A-202ENST00000244303 FAM89AQ96GI7 184 aa16.87■□□□□ 0.29
HIF3A-202ENST00000244303 GOLPH3LQ9H4A5 285 aa16.87■□□□□ 0.29
HIF3A-202ENST00000244303 AKAP2Q9Y2D5 859 aa16.87■□□□□ 0.29
HIF3A-202ENST00000244303 CARMIL3Q8ND23 1372 aa16.87■□□□□ 0.29
HIF3A-202ENST00000244303 BCL9O00512 1426 aa16.87■□□□□ 0.29
HIF3A-202ENST00000244303 ROBO1Q9Y6N7 1651 aa16.87■□□□□ 0.29
HIF3A-202ENST00000244303 PCCAP05165 728 aaPredicted RBP16.86■□□□□ 0.29
HIF3A-202ENST00000244303 HAND2P61296 217 aa16.86■□□□□ 0.29
HIF3A-202ENST00000244303 SLC4A9Q96Q91 983 aa16.86■□□□□ 0.29
HIF3A-202ENST00000244303 TRIM5Q9C035 493 aa16.86■□□□□ 0.29
HIF3A-202ENST00000244303 GPHNQ9NQX3 736 aaPredicted RBP16.86■□□□□ 0.29
HIF3A-202ENST00000244303 MAP3K15Q6ZN16 1313 aa16.86■□□□□ 0.29
HIF3A-202ENST00000244303 LRRFIP1Q32MZ4 808 aaKnown RBP16.86■□□□□ 0.29
HIF3A-202ENST00000244303 HSP90AB3PQ58FF7 597 aa16.86■□□□□ 0.29
HIF3A-202ENST00000244303 ILDR1Q86SU0 546 aaPredicted RBP16.86■□□□□ 0.29
HIF3A-202ENST00000244303 PLA2G4DQ86XP0 818 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms