RNA–Protein interactions for RNA: ENST00000242994.3

NEUROD4-201, Transcript of neuronal differentiation 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEUROD4, Length 3,953 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4-201ENST00000242994 CCDC196A0A1B0GTZ2 297 aa8.55□□□□□ -1.04
NEUROD4-201ENST00000242994 EYA2O00167 538 aa8.55□□□□□ -1.04
NEUROD4-201ENST00000242994 KRT18P05783 430 aaKnown RBP8.55□□□□□ -1.04
NEUROD4-201ENST00000242994 HOXB7P09629 217 aa8.55□□□□□ -1.04
NEUROD4-201ENST00000242994 EIF5P55010 431 aaKnown RBP8.55□□□□□ -1.04
NEUROD4-201ENST00000242994 NLRP5P59047 1200 aa8.55□□□□□ -1.04
NEUROD4-201ENST00000242994 WTAPQ15007 396 aa8.55□□□□□ -1.04
NEUROD4-201ENST00000242994 DZIP1Q86YF9 867 aaKnown RBP8.55□□□□□ -1.04
NEUROD4-201ENST00000242994 PHKBQ93100 1093 aa8.55□□□□□ -1.04
NEUROD4-201ENST00000242994 CEP89Q96ST8 783 aa8.55□□□□□ -1.04
NEUROD4-201ENST00000242994 LSG1Q9H089 658 aaKnown RBP8.55□□□□□ -1.04
NEUROD4-201ENST00000242994 STX8Q9UNK0 236 aa8.55□□□□□ -1.04
NEUROD4-201ENST00000242994 IRS4O14654 1257 aaPredicted RBP8.55□□□□□ -1.04
NEUROD4-201ENST00000242994 NR1I2O75469 434 aa8.55□□□□□ -1.04
NEUROD4-201ENST00000242994 CYP7A1P22680 504 aa8.55□□□□□ -1.04
NEUROD4-201ENST00000242994 SLFNL1Q499Z3 407 aa8.55□□□□□ -1.04
NEUROD4-201ENST00000242994 HS1BP3Q53T59 392 aa8.55□□□□□ -1.04
NEUROD4-201ENST00000242994 AXDND1Q5T1B0 1012 aaPredicted RBP8.55□□□□□ -1.04
NEUROD4-201ENST00000242994 MAGEB6Q8N7X4 407 aa8.55□□□□□ -1.04
NEUROD4-201ENST00000242994 KBTBD3Q8NAB2 608 aa8.55□□□□□ -1.04
NEUROD4-201ENST00000242994 RUFY1Q96T51 708 aa8.55□□□□□ -1.04
NEUROD4-201ENST00000242994 LRRC7Q96NW7 1537 aa8.55□□□□□ -1.04
NEUROD4-201ENST00000242994 TSPY2A6NKD2 308 aa8.55□□□□□ -1.04
NEUROD4-201ENST00000242994 IL2RBP14784 551 aa8.55□□□□□ -1.04
NEUROD4-201ENST00000242994 GNG11P61952 73 aa8.55□□□□□ -1.04
NEUROD4-201ENST00000242994 KIF4BQ2VIQ3 1234 aa8.55□□□□□ -1.04
NEUROD4-201ENST00000242994 SOGA3Q5TF21 947 aa8.55□□□□□ -1.04
NEUROD4-201ENST00000242994 KCNG4Q8TDN1 519 aa8.55□□□□□ -1.04
NEUROD4-201ENST00000242994 FTOQ9C0B1 505 aaKnown RBP eCLIP8.55□□□□□ -1.04
NEUROD4-201ENST00000242994 OSBPL3Q9H4L5 887 aa8.55□□□□□ -1.04
NEUROD4-201ENST00000242994 CLASP1Q7Z460 1538 aa8.55□□□□□ -1.04
NEUROD4-201ENST00000242994 PTCH1Q13635 1447 aa8.55□□□□□ -1.04
NEUROD4-201ENST00000242994 ATP7BP35670 1465 aa8.55□□□□□ -1.04
NEUROD4-201ENST00000242994 TAF5LO75529 589 aa8.54□□□□□ -1.04
NEUROD4-201ENST00000242994 PRDM1O75626 825 aa8.54□□□□□ -1.04
NEUROD4-201ENST00000242994 ZNHIT6Q9NWK9 470 aaKnown RBP8.54□□□□□ -1.04
NEUROD4-201ENST00000242994 DBNLQ9UJU6 430 aaKnown RBP8.54□□□□□ -1.04
NEUROD4-201ENST00000242994 AOX1Q06278 1338 aa8.54□□□□□ -1.04
NEUROD4-201ENST00000242994 KIF24Q5T7B8 1368 aa8.54□□□□□ -1.04
NEUROD4-201ENST00000242994 hCG_1642624A0A1W2PR95 340 aa8.54□□□□□ -1.04
NEUROD4-201ENST00000242994 ZFYP08048 801 aaPredicted RBP8.54□□□□□ -1.04
NEUROD4-201ENST00000242994 STIM1Q13586 685 aa8.54□□□□□ -1.04
NEUROD4-201ENST00000242994 TTF1Q15361 905 aaPredicted RBP8.54□□□□□ -1.04
NEUROD4-201ENST00000242994 LRRC24Q50LG9 513 aa8.54□□□□□ -1.04
NEUROD4-201ENST00000242994 TMCO3Q6UWJ1 677 aa8.54□□□□□ -1.04
NEUROD4-201ENST00000242994 DNAJC10Q8IXB1 793 aa8.54□□□□□ -1.04
NEUROD4-201ENST00000242994 CCDC24Q8N4L8 307 aa8.54□□□□□ -1.04
NEUROD4-201ENST00000242994 XAGE2Q96GT9 111 aa8.54□□□□□ -1.04
NEUROD4-201ENST00000242994 TULP4Q9NRJ4 1543 aa8.54□□□□□ -1.04
NEUROD4-201ENST00000242994 GPAA1O43292 621 aa8.54□□□□□ -1.04
NEUROD4-201ENST00000242994 ZAP70P43403 619 aa8.54□□□□□ -1.04
NEUROD4-201ENST00000242994 RBM5P52756 815 aaKnown RBP eCLIP8.54□□□□□ -1.04
NEUROD4-201ENST00000242994 NOM1Q5C9Z4 860 aaKnown RBP8.54□□□□□ -1.04
NEUROD4-201ENST00000242994 CATIPQ7Z7H3 387 aa8.54□□□□□ -1.04
NEUROD4-201ENST00000242994 DZIP3Q86Y13 1208 aaKnown RBP8.54□□□□□ -1.04
NEUROD4-201ENST00000242994 ZSCAN29Q8IWY8 852 aaPredicted RBP8.54□□□□□ -1.04
NEUROD4-201ENST00000242994 PLBD2Q8NHP8 589 aa8.54□□□□□ -1.04
NEUROD4-201ENST00000242994 STAP2Q9UGK3 403 aa8.54□□□□□ -1.04
NEUROD4-201ENST00000242994 TCEAL9Q9UHQ7 104 aa8.54□□□□□ -1.04
NEUROD4-201ENST00000242994 CEP131Q9UPN4 1083 aa8.54□□□□□ -1.04
NEUROD4-201ENST00000242994 NIP7Q9Y221 180 aaKnown RBP eCLIP8.54□□□□□ -1.04
NEUROD4-201ENST00000242994 HECW2Q9P2P5 1572 aa8.54□□□□□ -1.04
NEUROD4-201ENST00000242994 RTN1Q16799 776 aa8.54□□□□□ -1.04
NEUROD4-201ENST00000242994 CCDC102AQ96A19 550 aa8.54□□□□□ -1.04
NEUROD4-201ENST00000242994 DHX58Q96C10 678 aa8.54□□□□□ -1.04
NEUROD4-201ENST00000242994 NUP88Q99567 741 aaPredicted RBP8.54□□□□□ -1.04
NEUROD4-201ENST00000242994 MBD4O95243 580 aa8.53□□□□□ -1.04
NEUROD4-201ENST00000242994 ITGA6P23229 1130 aa8.53□□□□□ -1.04
NEUROD4-201ENST00000242994 GSDMDP57764 484 aa8.53□□□□□ -1.04
NEUROD4-201ENST00000242994 PPP1R9BQ96SB3 815 aa8.53□□□□□ -1.04
NEUROD4-201ENST00000242994 RIOK3O14730 519 aaKnown RBP8.53□□□□□ -1.04
NEUROD4-201ENST00000242994 ATP6V1AP38606 617 aa8.53□□□□□ -1.04
NEUROD4-201ENST00000242994 TRMT1LQ7Z2T5 733 aaKnown RBP8.53□□□□□ -1.04
NEUROD4-201ENST00000242994 KLHL34Q8N239 644 aa8.53□□□□□ -1.04
NEUROD4-201ENST00000242994 ZFP91Q96JP5 570 aaPredicted RBP8.53□□□□□ -1.04
NEUROD4-201ENST00000242994 CCDC43Q96MW1 224 aaKnown RBP8.53□□□□□ -1.04
NEUROD4-201ENST00000242994 USP28Q96RU2 1077 aa8.53□□□□□ -1.04
NEUROD4-201ENST00000242994 RNF41Q9H4P4 317 aaPredicted RBP8.53□□□□□ -1.04
NEUROD4-201ENST00000242994 BABAM1Q9NWV8 329 aa8.53□□□□□ -1.04
NEUROD4-201ENST00000242994 QRICH2Q9H0J4 1663 aa8.53□□□□□ -1.04
NEUROD4-201ENST00000242994 CEP152O94986 1710 aa8.53□□□□□ -1.04
NEUROD4-201ENST00000242994 RGS12O14924 1447 aa8.53□□□□□ -1.04
NEUROD4-201ENST00000242994 CDK12Q9NYV4 1490 aaPredicted RBP8.53□□□□□ -1.04
NEUROD4-201ENST00000242994 CCDC194A0A1B0GVG4 234 aa8.53□□□□□ -1.04
NEUROD4-201ENST00000242994 KIAA1328Q86T90 577 aa8.53□□□□□ -1.04
NEUROD4-201ENST00000242994 CMTR1Q8N1G2 835 aaKnown RBP8.53□□□□□ -1.04
NEUROD4-201ENST00000242994 UBE2Q2Q8WVN8 375 aa8.53□□□□□ -1.04
NEUROD4-201ENST00000242994 PUS3Q9BZE2 481 aaKnown RBP8.53□□□□□ -1.04
NEUROD4-201ENST00000242994 ZSWIM6Q9HCJ5 1215 aa8.53□□□□□ -1.04
NEUROD4-201ENST00000242994 ZNF652Q9Y2D9 606 aa8.53□□□□□ -1.04
NEUROD4-201ENST00000242994 POLR1AO95602 1720 aaPredicted RBP8.52□□□□□ -1.05
NEUROD4-201ENST00000242994 PATL2C9JE40 543 aaKnown RBP8.52□□□□□ -1.05
NEUROD4-201ENST00000242994 ZSCAN12O43309 604 aa8.52□□□□□ -1.05
NEUROD4-201ENST00000242994 ZPR1O75312 459 aa8.52□□□□□ -1.05
NEUROD4-201ENST00000242994 IDEP14735 1019 aa8.52□□□□□ -1.05
NEUROD4-201ENST00000242994 FAM160A1Q05DH4 1040 aa8.52□□□□□ -1.05
NEUROD4-201ENST00000242994 PI16Q6UXB8 463 aa8.52□□□□□ -1.05
NEUROD4-201ENST00000242994 SYT10Q6XYQ8 523 aa8.52□□□□□ -1.05
NEUROD4-201ENST00000242994 PI4K2BQ8TCG2 481 aa8.52□□□□□ -1.05
NEUROD4-201ENST00000242994 CCDC12Q8WUD4 166 aaPredicted RBP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms