RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 HECW2Q9P2P5 1572 aa10.28□□□□□ -0.76
CXCR4-201ENST00000241393 NEO1Q92859 1461 aa10.28□□□□□ -0.76
CXCR4-201ENST00000241393 CD109Q6YHK3 1445 aa10.28□□□□□ -0.76
CXCR4-201ENST00000241393 H7C1W4 665 aa10.28□□□□□ -0.76
CXCR4-201ENST00000241393 MZF1P28698 734 aaPredicted RBP10.28□□□□□ -0.76
CXCR4-201ENST00000241393 ZAP70P43403 619 aa10.28□□□□□ -0.76
CXCR4-201ENST00000241393 FGD1P98174 961 aa10.28□□□□□ -0.76
CXCR4-201ENST00000241393 FIGNL1Q6PIW4 674 aa10.28□□□□□ -0.76
CXCR4-201ENST00000241393 TREML1Q86YW5 311 aa10.28□□□□□ -0.76
CXCR4-201ENST00000241393 PIK3R5Q8WYR1 880 aa10.28□□□□□ -0.76
CXCR4-201ENST00000241393 ASB16Q96NS5 453 aa10.28□□□□□ -0.76
CXCR4-201ENST00000241393 RBCK1Q9BYM8 510 aa10.28□□□□□ -0.76
CXCR4-201ENST00000241393 DNMT3LQ9UJW3 386 aa10.28□□□□□ -0.76
CXCR4-201ENST00000241393 ERVK-7P63135 1459 aa10.27□□□□□ -0.77
CXCR4-201ENST00000241393 RPGRIP1LQ68CZ1 1315 aa10.27□□□□□ -0.77
CXCR4-201ENST00000241393 ST8SIA5O15466 376 aa10.27□□□□□ -0.77
CXCR4-201ENST00000241393 ATP4AP20648 1035 aa10.27□□□□□ -0.77
CXCR4-201ENST00000241393 NGEFQ8N5V2 710 aa10.27□□□□□ -0.77
CXCR4-201ENST00000241393 DMRTB1Q96MA1 342 aa10.27□□□□□ -0.77
CXCR4-201ENST00000241393 GAS2L1Q99501 681 aaPredicted RBP10.27□□□□□ -0.77
CXCR4-201ENST00000241393 CRISPLD1Q9H336 500 aa10.27□□□□□ -0.77
CXCR4-201ENST00000241393 FRMPD1Q5SYB0 1578 aa10.27□□□□□ -0.77
CXCR4-201ENST00000241393 A0A1W2PNR3 127 aa10.26□□□□□ -0.77
CXCR4-201ENST00000241393 MICAL2O94851 1124 aa10.26□□□□□ -0.77
CXCR4-201ENST00000241393 EHHADHQ08426 723 aa10.26□□□□□ -0.77
CXCR4-201ENST00000241393 COL19A1Q14993 1142 aa10.26□□□□□ -0.77
CXCR4-201ENST00000241393 RGL4Q8IZJ4 473 aa10.26□□□□□ -0.77
CXCR4-201ENST00000241393 ZIC5Q96T25 663 aa10.26□□□□□ -0.77
CXCR4-201ENST00000241393 FNDC3AQ9Y2H6 1198 aaKnown RBP10.26□□□□□ -0.77
CXCR4-201ENST00000241393 UGGT1Q9NYU2 1555 aa10.25□□□□□ -0.77
CXCR4-201ENST00000241393 ARSDP51689 593 aa10.25□□□□□ -0.77
CXCR4-201ENST00000241393 WDR43Q15061 677 aaKnown RBP eCLIP10.25□□□□□ -0.77
CXCR4-201ENST00000241393 GMCL1Q96IK5 515 aa10.25□□□□□ -0.77
CXCR4-201ENST00000241393 NPATQ14207 1427 aa10.25□□□□□ -0.77
CXCR4-201ENST00000241393 MROH2AA6NES4 1674 aa10.25□□□□□ -0.77
CXCR4-201ENST00000241393 ADGRF5Q8IZF2 1346 aa10.25□□□□□ -0.77
CXCR4-201ENST00000241393 ETFBKMTQ8IXQ9 262 aa10.25□□□□□ -0.77
CXCR4-201ENST00000241393 GPAMQ9HCL2 828 aa10.25□□□□□ -0.77
CXCR4-201ENST00000241393 ZNF521Q96K83 1311 aa10.24□□□□□ -0.77
CXCR4-201ENST00000241393 ABCC3O15438 1527 aa10.24□□□□□ -0.77
CXCR4-201ENST00000241393 ECM1Q16610 540 aa10.24□□□□□ -0.77
CXCR4-201ENST00000241393 LRRC69Q6ZNQ3 347 aa10.24□□□□□ -0.77
CXCR4-201ENST00000241393 PUS7Q96PZ0 661 aaKnown RBP10.24□□□□□ -0.77
CXCR4-201ENST00000241393 ADAMTS8Q9UP79 889 aa10.24□□□□□ -0.77
CXCR4-201ENST00000241393 PPLO60437 1756 aa10.24□□□□□ -0.77
CXCR4-201ENST00000241393 ANKRD33BA6NCL7 494 aa10.23□□□□□ -0.77
CXCR4-201ENST00000241393 DNM1Q05193 864 aaKnown RBP10.23□□□□□ -0.77
CXCR4-201ENST00000241393 SAMD5Q5TGI4 173 aa10.23□□□□□ -0.77
CXCR4-201ENST00000241393 DNAJC14Q6Y2X3 702 aaPredicted RBP10.23□□□□□ -0.77
CXCR4-201ENST00000241393 TRIM47Q96LD4 638 aa10.23□□□□□ -0.77
CXCR4-201ENST00000241393 NOS1P29475 1434 aa10.23□□□□□ -0.77
CXCR4-201ENST00000241393 ARHGAP31Q2M1Z3 1444 aa10.23□□□□□ -0.77
CXCR4-201ENST00000241393 TCERG1O14776 1098 aaKnown RBP10.22□□□□□ -0.77
CXCR4-201ENST00000241393 IDH3AP50213 366 aa10.22□□□□□ -0.77
CXCR4-201ENST00000241393 RIPOR1Q6ZS17 1223 aa10.22□□□□□ -0.77
CXCR4-201ENST00000241393 BTLAQ7Z6A9 289 aa10.22□□□□□ -0.77
CXCR4-201ENST00000241393 NPM2Q86SE8 214 aaKnown RBP10.22□□□□□ -0.77
CXCR4-201ENST00000241393 C7orf43Q8WVR3 580 aa10.22□□□□□ -0.77
CXCR4-201ENST00000241393 EDEM1Q92611 657 aa10.22□□□□□ -0.77
CXCR4-201ENST00000241393 C14orf93Q9H972 538 aaKnown RBP10.22□□□□□ -0.77
CXCR4-201ENST00000241393 CENPJQ9HC77 1338 aaPredicted RBP10.22□□□□□ -0.77
CXCR4-201ENST00000241393 ADGRB1O14514 1584 aa10.22□□□□□ -0.77
CXCR4-201ENST00000241393 FZD6O60353 706 aa10.22□□□□□ -0.77
CXCR4-201ENST00000241393 EXOC6Q8TAG9 804 aa10.22□□□□□ -0.77
CXCR4-201ENST00000241393 CEP63Q96MT8 703 aa10.22□□□□□ -0.77
CXCR4-201ENST00000241393 RUBCNLQ9H714 662 aa10.22□□□□□ -0.77
CXCR4-201ENST00000241393 C11orf16Q9NQ32 467 aa10.22□□□□□ -0.77
CXCR4-201ENST00000241393 ZC3H13Q5T200 1668 aaKnown RBP10.21□□□□□ -0.78
CXCR4-201ENST00000241393 PTSQ03393 145 aa10.21□□□□□ -0.78
CXCR4-201ENST00000241393 Q6ZNB5 142 aa10.21□□□□□ -0.78
CXCR4-201ENST00000241393 HSH2DQ96JZ2 352 aa10.21□□□□□ -0.78
CXCR4-201ENST00000241393 PIK3C2BO00750 1634 aa10.21□□□□□ -0.78
CXCR4-201ENST00000241393 POLR3AO14802 1390 aaPredicted RBP10.21□□□□□ -0.78
CXCR4-201ENST00000241393 CAMSAP1Q5T5Y3 1602 aa10.2□□□□□ -0.78
CXCR4-201ENST00000241393 USP32Q8NFA0 1604 aa10.2□□□□□ -0.78
CXCR4-201ENST00000241393 PDGFAP04085 211 aa10.2□□□□□ -0.78
CXCR4-201ENST00000241393 FOXR1Q6PIV2 292 aa10.2□□□□□ -0.78
CXCR4-201ENST00000241393 GPR152Q8TDT2 470 aa10.2□□□□□ -0.78
CXCR4-201ENST00000241393 POLIQ9UNA4 740 aa10.2□□□□□ -0.78
CXCR4-201ENST00000241393 PLEKHH1Q9ULM0 1364 aa10.2□□□□□ -0.78
CXCR4-201ENST00000241393 ZBTB39O15060 712 aa10.19□□□□□ -0.78
CXCR4-201ENST00000241393 DUSP27Q5VZP5 1158 aa10.19□□□□□ -0.78
CXCR4-201ENST00000241393 BCL2L13Q9BXK5 485 aa10.19□□□□□ -0.78
CXCR4-201ENST00000241393 NUCKS1Q9H1E3 243 aaKnown RBP10.19□□□□□ -0.78
CXCR4-201ENST00000241393 CCDC87Q9NVE4 849 aa10.19□□□□□ -0.78
CXCR4-201ENST00000241393 BCS1LQ9Y276 419 aa10.19□□□□□ -0.78
CXCR4-201ENST00000241393 ZFYVE9O95405 1425 aa10.19□□□□□ -0.78
CXCR4-201ENST00000241393 DIP2CQ9Y2E4 1556 aa10.19□□□□□ -0.78
CXCR4-201ENST00000241393 SENP3-EIF4A1A0A087X0R7 540 aa10.18□□□□□ -0.78
CXCR4-201ENST00000241393 SLC35F4A4IF30 521 aa10.18□□□□□ -0.78
CXCR4-201ENST00000241393 PLCB3Q01970 1234 aa10.18□□□□□ -0.78
CXCR4-201ENST00000241393 ATCAYQ86WG3 371 aa10.18□□□□□ -0.78
CXCR4-201ENST00000241393 TRMT2AQ8IZ69 625 aaKnown RBP10.18□□□□□ -0.78
CXCR4-201ENST00000241393 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.18□□□□□ -0.78
CXCR4-201ENST00000241393 ZNF280CQ8ND82 737 aa10.18□□□□□ -0.78
CXCR4-201ENST00000241393 FOXD4L4Q8WXT5 416 aaPredicted RBP10.18□□□□□ -0.78
CXCR4-201ENST00000241393 PHF24Q9UPV7 400 aa10.18□□□□□ -0.78
CXCR4-201ENST00000241393 ANP32AP39687 249 aaKnown RBP10.18□□□□□ -0.78
CXCR4-201ENST00000241393 SLFN5Q08AF3 891 aa10.18□□□□□ -0.78
CXCR4-201ENST00000241393 TMC7Q7Z402 723 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms