RNA–Protein interactions for RNA: ENST00000241312.8

CSMD2-201, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best)

Gene CSMD2, Length 13,108 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-201ENST00000241312 MIPOL1Q8TD10 442 aa7.63□□□□□ -1.19
CSMD2-201ENST00000241312 ARHGAP45Q92619 1136 aa7.63□□□□□ -1.19
CSMD2-201ENST00000241312 SNAPC4Q5SXM2 1469 aa7.63□□□□□ -1.19
CSMD2-201ENST00000241312 ZBTB43O43298 467 aa7.63□□□□□ -1.19
CSMD2-201ENST00000241312 CHMP4BP1P59074 171 aa7.63□□□□□ -1.19
CSMD2-201ENST00000241312 AOPEPQ8N6M6 819 aa7.63□□□□□ -1.19
CSMD2-201ENST00000241312 MRVI1Q9Y6F6 885 aa7.63□□□□□ -1.19
CSMD2-201ENST00000241312 CFAP157Q5JU67 520 aa7.63□□□□□ -1.19
CSMD2-201ENST00000241312 NUDT16Q96DE0 195 aaKnown RBP7.63□□□□□ -1.19
CSMD2-201ENST00000241312 TMX3Q96JJ7 454 aa7.63□□□□□ -1.19
CSMD2-201ENST00000241312 NKIRAS1Q9NYS0 192 aa7.63□□□□□ -1.19
CSMD2-201ENST00000241312 ATP6V0A2Q9Y487 856 aa7.63□□□□□ -1.19
CSMD2-201ENST00000241312 KIF3CO14782 793 aa7.63□□□□□ -1.19
CSMD2-201ENST00000241312 CALML3P27482 149 aa7.63□□□□□ -1.19
CSMD2-201ENST00000241312 PPP1R42Q7Z4L9 355 aa7.63□□□□□ -1.19
CSMD2-201ENST00000241312 SNX21Q969T3 373 aa7.63□□□□□ -1.19
CSMD2-201ENST00000241312 RASSF4Q9H2L5 321 aa7.63□□□□□ -1.19
CSMD2-201ENST00000241312 ODF2LQ9ULJ1 636 aa7.63□□□□□ -1.19
CSMD2-201ENST00000241312 EEF2P13639 858 aaKnown RBP7.63□□□□□ -1.19
CSMD2-201ENST00000241312 CCDC50Q8IVM0 306 aa7.63□□□□□ -1.19
CSMD2-201ENST00000241312 ARHGEF11O15085 1522 aa7.63□□□□□ -1.19
CSMD2-201ENST00000241312 CNTRLQ7Z7A1 2325 aa7.63□□□□□ -1.19
CSMD2-201ENST00000241312 VCX3BQ9H321 246 aa7.63□□□□□ -1.19
CSMD2-201ENST00000241312 OGFRQ9NZT2 677 aa7.63□□□□□ -1.19
CSMD2-201ENST00000241312 TMEM87AQ8NBN3 555 aa7.63□□□□□ -1.19
CSMD2-201ENST00000241312 TRIM75PA6NK02 468 aa7.63□□□□□ -1.19
CSMD2-201ENST00000241312 HAND2P61296 217 aa7.63□□□□□ -1.19
CSMD2-201ENST00000241312 SLC4A8Q2Y0W8 1093 aa7.63□□□□□ -1.19
CSMD2-201ENST00000241312 SMC1BQ8NDV3 1235 aa7.63□□□□□ -1.19
CSMD2-201ENST00000241312 ZGPATQ8N5A5 531 aaKnown RBP7.63□□□□□ -1.19
CSMD2-201ENST00000241312 NEK11Q8NG66 645 aa7.63□□□□□ -1.19
CSMD2-201ENST00000241312 F13A1P00488 732 aa7.63□□□□□ -1.19
CSMD2-201ENST00000241312 CCDC8Q9H0W5 538 aaPredicted RBP7.63□□□□□ -1.19
CSMD2-201ENST00000241312 CTTNBP2Q8WZ74 1663 aa7.63□□□□□ -1.19
CSMD2-201ENST00000241312 USP48Q86UV5 1035 aa7.62□□□□□ -1.19
CSMD2-201ENST00000241312 USHBP1Q8N6Y0 703 aa7.62□□□□□ -1.19
CSMD2-201ENST00000241312 VPS18Q9P253 973 aa7.62□□□□□ -1.19
CSMD2-201ENST00000241312 PTCD1O75127 700 aaKnown RBP7.62□□□□□ -1.19
CSMD2-201ENST00000241312 ATP11AP98196 1134 aa7.62□□□□□ -1.19
CSMD2-201ENST00000241312 CCDC186Q7Z3E2 898 aa7.62□□□□□ -1.19
CSMD2-201ENST00000241312 TRIM7Q9C029 511 aa7.62□□□□□ -1.19
CSMD2-201ENST00000241312 HDAC9Q9UKV0 1011 aa7.62□□□□□ -1.19
CSMD2-201ENST00000241312 CLGNO14967 610 aa7.62□□□□□ -1.19
CSMD2-201ENST00000241312 TUBB2AQ13885 445 aa7.62□□□□□ -1.19
CSMD2-201ENST00000241312 TUBB2BQ9BVA1 445 aa7.62□□□□□ -1.19
CSMD2-201ENST00000241312 MAP3K2Q9Y2U5 619 aa7.62□□□□□ -1.19
CSMD2-201ENST00000241312 KLF18A0A0U1RQI7 1052 aa7.62□□□□□ -1.19
CSMD2-201ENST00000241312 SEL1L2Q5TEA6 688 aa7.62□□□□□ -1.19
CSMD2-201ENST00000241312 MICALL1Q8N3F8 863 aa7.62□□□□□ -1.19
CSMD2-201ENST00000241312 TPD52P55327 224 aaPredicted RBP7.62□□□□□ -1.19
CSMD2-201ENST00000241312 CALCOCO2Q13137 446 aa7.62□□□□□ -1.19
CSMD2-201ENST00000241312 SPTLC2O15270 562 aa7.62□□□□□ -1.19
CSMD2-201ENST00000241312 AFMP43652 599 aa7.62□□□□□ -1.19
CSMD2-201ENST00000241312 NAA25Q14CX7 972 aa7.62□□□□□ -1.19
CSMD2-201ENST00000241312 CCDC63Q8NA47 563 aa7.62□□□□□ -1.19
CSMD2-201ENST00000241312 TEX13AQ9BXU3 409 aaPredicted RBP7.62□□□□□ -1.19
CSMD2-201ENST00000241312 ZEB2O60315 1214 aa7.62□□□□□ -1.19
CSMD2-201ENST00000241312 GPR161Q8N6U8 529 aaKnown RBP7.62□□□□□ -1.19
CSMD2-201ENST00000241312 PPFIBP2Q8ND30 876 aa7.62□□□□□ -1.19
CSMD2-201ENST00000241312 THOC2Q8NI27 1593 aaKnown RBP7.62□□□□□ -1.19
CSMD2-201ENST00000241312 PTGS1P23219 599 aa7.62□□□□□ -1.19
CSMD2-201ENST00000241312 MBIPQ9NS73 344 aa7.62□□□□□ -1.19
CSMD2-201ENST00000241312 PPP1R7Q15435 360 aa7.62□□□□□ -1.19
CSMD2-201ENST00000241312 C6orf50Q9HD87 102 aa7.62□□□□□ -1.19
CSMD2-201ENST00000241312 IFIT1BQ5T764 474 aaKnown RBP7.62□□□□□ -1.19
CSMD2-201ENST00000241312 NUTM2AQ8IVF1 878 aaPredicted RBP7.62□□□□□ -1.19
CSMD2-201ENST00000241312 CACNA2D3Q8IZS8 1091 aa7.62□□□□□ -1.19
CSMD2-201ENST00000241312 LUC7L2Q9Y383 392 aaKnown RBP7.62□□□□□ -1.19
CSMD2-201ENST00000241312 PDE4DIPQ5VU43 2346 aa7.61□□□□□ -1.19
CSMD2-201ENST00000241312 TRIM14Q14142 442 aa7.61□□□□□ -1.19
CSMD2-201ENST00000241312 AFAP1L1Q8TED9 768 aa7.61□□□□□ -1.19
CSMD2-201ENST00000241312 BRF1Q92994 677 aa7.61□□□□□ -1.19
CSMD2-201ENST00000241312 GUCA1BQ9UMX6 200 aa7.61□□□□□ -1.19
CSMD2-201ENST00000241312 INF2Q27J81 1249 aa7.61□□□□□ -1.19
CSMD2-201ENST00000241312 FYB2Q5VWT5 728 aa7.61□□□□□ -1.19
CSMD2-201ENST00000241312 ATL3Q6DD88 541 aa7.61□□□□□ -1.19
CSMD2-201ENST00000241312 TXNDC16Q9P2K2 825 aa7.61□□□□□ -1.19
CSMD2-201ENST00000241312 PHACTR2O75167 634 aa7.61□□□□□ -1.19
CSMD2-201ENST00000241312 TSPY3P0CV98 308 aa7.61□□□□□ -1.19
CSMD2-201ENST00000241312 TSPY8P0CW00 308 aa7.61□□□□□ -1.19
CSMD2-201ENST00000241312 SNX16P57768 344 aa7.61□□□□□ -1.19
CSMD2-201ENST00000241312 INTS8Q75QN2 995 aaKnown RBP7.61□□□□□ -1.19
CSMD2-201ENST00000241312 ALG1Q9BT22 464 aa7.61□□□□□ -1.19
CSMD2-201ENST00000241312 CSRNP2Q9H175 543 aa7.61□□□□□ -1.19
CSMD2-201ENST00000241312 TTC41PQ6P2S7 1318 aa7.61□□□□□ -1.19
CSMD2-201ENST00000241312 SETSIPP0DME0 302 aa7.61□□□□□ -1.19
CSMD2-201ENST00000241312 PPP2R3AQ06190 1150 aa7.61□□□□□ -1.19
CSMD2-201ENST00000241312 WDR78Q5VTH9 848 aa7.61□□□□□ -1.19
CSMD2-201ENST00000241312 CABP5Q9NP86 173 aa7.61□□□□□ -1.19
CSMD2-201ENST00000241312 NDC80O14777 642 aa7.61□□□□□ -1.19
CSMD2-201ENST00000241312 GBP1P32455 592 aa7.61□□□□□ -1.19
CSMD2-201ENST00000241312 DNAJC25Q9H1X3 360 aa7.61□□□□□ -1.19
CSMD2-201ENST00000241312 A0A1B0GUL7 405 aa7.61□□□□□ -1.19
CSMD2-201ENST00000241312 TRMT1LQ7Z2T5 733 aaKnown RBP7.61□□□□□ -1.19
CSMD2-201ENST00000241312 ABCC5O15440 1437 aa7.61□□□□□ -1.19
CSMD2-201ENST00000241312 RPRD2Q5VT52 1461 aaKnown RBP7.61□□□□□ -1.19
CSMD2-201ENST00000241312 IGHDP01880 384 aa7.61□□□□□ -1.19
CSMD2-201ENST00000241312 SDSP20132 328 aa7.61□□□□□ -1.19
CSMD2-201ENST00000241312 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.61□□□□□ -1.19
CSMD2-201ENST00000241312 LMOD1P29536 600 aaPredicted RBP7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms