RNA–Protein interactions for RNA: ENST00000238628.10

IFT43-201, Transcript of intraflagellar transport 43, humanhuman

TSL 1 (best) BASIC

Gene IFT43, Length 816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-201ENST00000238628 MYOZ2Q9NPC6 264 aa10.93□□□□□ -0.66
IFT43-201ENST00000238628 TSPYL4Q9UJ04 414 aa10.93□□□□□ -0.66
IFT43-201ENST00000238628 ANGEL1Q9UNK9 670 aaKnown RBP10.93□□□□□ -0.66
IFT43-201ENST00000238628 ANXA1P04083 346 aa10.92□□□□□ -0.66
IFT43-201ENST00000238628 USP17L8P0C7I0 530 aa10.92□□□□□ -0.66
IFT43-201ENST00000238628 AIMP1Q12904 312 aaKnown RBP10.92□□□□□ -0.66
IFT43-201ENST00000238628 PDIA6Q15084 440 aa10.92□□□□□ -0.66
IFT43-201ENST00000238628 TMC4Q7Z404 712 aa10.92□□□□□ -0.66
IFT43-201ENST00000238628 LRP10Q7Z4F1 713 aa10.92□□□□□ -0.66
IFT43-201ENST00000238628 AGBL3Q8NEM8 1001 aa10.92□□□□□ -0.66
IFT43-201ENST00000238628 NKX2-3Q8TAU0 364 aa10.92□□□□□ -0.66
IFT43-201ENST00000238628 NECTIN2Q92692 538 aa10.92□□□□□ -0.66
IFT43-201ENST00000238628 SHISA4Q96DD7 197 aa10.92□□□□□ -0.66
IFT43-201ENST00000238628 TRMT112Q9UI30 125 aaKnown RBP10.92□□□□□ -0.66
IFT43-201ENST00000238628 MAPK8IP3Q9UPT6 1336 aa10.91□□□□□ -0.66
IFT43-201ENST00000238628 EVI5O60447 810 aa10.91□□□□□ -0.66
IFT43-201ENST00000238628 ZBTB48P10074 688 aaPredicted RBP10.91□□□□□ -0.66
IFT43-201ENST00000238628 PROSER3Q2NL68 480 aa10.91□□□□□ -0.66
IFT43-201ENST00000238628 LDLRAD1Q5T700 205 aa10.91□□□□□ -0.66
IFT43-201ENST00000238628 RSBN1LQ6PCB5 846 aaPredicted RBP10.91□□□□□ -0.66
IFT43-201ENST00000238628 COPS6Q7L5N1 327 aa10.91□□□□□ -0.66
IFT43-201ENST00000238628 NLRP10Q86W26 655 aa10.91□□□□□ -0.66
IFT43-201ENST00000238628 ZC3H12CQ9C0D7 883 aaKnown RBP10.91□□□□□ -0.66
IFT43-201ENST00000238628 POLLQ9UGP5 575 aa10.91□□□□□ -0.66
IFT43-201ENST00000238628 DUOX1Q9NRD9 1551 aa10.9□□□□□ -0.66
IFT43-201ENST00000238628 NBPF9Q3BBW0 867 aa10.9□□□□□ -0.66
IFT43-201ENST00000238628 XAGE3Q8WTP9 111 aa10.9□□□□□ -0.66
IFT43-201ENST00000238628 FAM122AQ96E09 287 aa10.9□□□□□ -0.66
IFT43-201ENST00000238628 WNK4Q96J92 1243 aa10.9□□□□□ -0.66
IFT43-201ENST00000238628 SH3TC1Q8TE82 1336 aa10.89□□□□□ -0.67
IFT43-201ENST00000238628 PLA2G5P39877 138 aa10.89□□□□□ -0.67
IFT43-201ENST00000238628 RIPK4P57078 832 aa10.89□□□□□ -0.67
IFT43-201ENST00000238628 GPSM2P81274 684 aa10.89□□□□□ -0.67
IFT43-201ENST00000238628 MTFR1Q15390 333 aa10.89□□□□□ -0.67
IFT43-201ENST00000238628 RAPGEFL1Q9UHV5 662 aa10.89□□□□□ -0.67
IFT43-201ENST00000238628 FZD1Q9UP38 647 aa10.89□□□□□ -0.67
IFT43-201ENST00000238628 UNC80Q8N2C7 3258 aa10.89□□□□□ -0.67
IFT43-201ENST00000238628 GJA8P48165 433 aa10.88□□□□□ -0.67
IFT43-201ENST00000238628 UBE2Q1Q7Z7E8 422 aa10.88□□□□□ -0.67
IFT43-201ENST00000238628 ZNF428Q96B54 188 aa10.88□□□□□ -0.67
IFT43-201ENST00000238628 BABAM1Q9NWV8 329 aa10.88□□□□□ -0.67
IFT43-201ENST00000238628 RPTORQ8N122 1335 aa10.87□□□□□ -0.67
IFT43-201ENST00000238628 BCAMP50895 628 aa10.87□□□□□ -0.67
IFT43-201ENST00000238628 KIF22Q14807 665 aa10.87□□□□□ -0.67
IFT43-201ENST00000238628 LRIT3Q3SXY7 679 aa10.87□□□□□ -0.67
IFT43-201ENST00000238628 TBC1D16Q8TBP0 767 aa10.87□□□□□ -0.67
IFT43-201ENST00000238628 CELF1Q92879 486 aaKnown RBP10.87□□□□□ -0.67
IFT43-201ENST00000238628 CLMNQ96JQ2 1002 aa10.87□□□□□ -0.67
IFT43-201ENST00000238628 PTPN18Q99952 460 aa10.87□□□□□ -0.67
IFT43-201ENST00000238628 ZFYVE28Q9HCC9 887 aa10.87□□□□□ -0.67
IFT43-201ENST00000238628 SCN9AQ15858 1988 aa10.86□□□□□ -0.67
IFT43-201ENST00000238628 LAMA3Q16787 3333 aa10.86□□□□□ -0.67
IFT43-201ENST00000238628 FARP2O94887 1054 aaPredicted RBP10.86□□□□□ -0.67
IFT43-201ENST00000238628 GJB1P08034 283 aa10.86□□□□□ -0.67
IFT43-201ENST00000238628 BMP8BP34820 402 aa10.86□□□□□ -0.67
IFT43-201ENST00000238628 TAF1CQ15572 869 aaPredicted RBP10.86□□□□□ -0.67
IFT43-201ENST00000238628 OGFOD1Q8N543 542 aa10.86□□□□□ -0.67
IFT43-201ENST00000238628 GMLQ99445 158 aa10.86□□□□□ -0.67
IFT43-201ENST00000238628 DDX60Q8IY21 1712 aaKnown RBP10.85□□□□□ -0.67
IFT43-201ENST00000238628 WNT10BO00744 389 aa10.85□□□□□ -0.67
IFT43-201ENST00000238628 PPP1R12BO60237 982 aaPredicted RBP10.85□□□□□ -0.67
IFT43-201ENST00000238628 LMOD3Q0VAK6 560 aa10.85□□□□□ -0.67
IFT43-201ENST00000238628 SF3B3Q15393 1217 aaKnown RBP10.85□□□□□ -0.67
IFT43-201ENST00000238628 SYMPKQ92797 1274 aaKnown RBP10.85□□□□□ -0.67
IFT43-201ENST00000238628 FAM89AQ96GI7 184 aa10.85□□□□□ -0.67
IFT43-201ENST00000238628 GDF15Q99988 308 aa10.85□□□□□ -0.67
IFT43-201ENST00000238628 RNF208Q9H0X6 261 aa10.85□□□□□ -0.67
IFT43-201ENST00000238628 LRRC37AA6NMS7 1700 aa10.84□□□□□ -0.67
IFT43-201ENST00000238628 TESPA1A2RU30 521 aaPredicted RBP10.84□□□□□ -0.67
IFT43-201ENST00000238628 ATP5J2-PTCD1G3V325 749 aa10.84□□□□□ -0.67
IFT43-201ENST00000238628 ECM2O94769 699 aaPredicted RBP10.84□□□□□ -0.67
IFT43-201ENST00000238628 TMPOP42166 694 aaKnown RBP10.84□□□□□ -0.67
IFT43-201ENST00000238628 PRMT2P55345 433 aa10.84□□□□□ -0.67
IFT43-201ENST00000238628 RPS8P62241 208 aaKnown RBP10.84□□□□□ -0.67
IFT43-201ENST00000238628 RTL5Q5HYW3 569 aaPredicted RBP10.84□□□□□ -0.67
IFT43-201ENST00000238628 APOBEC3FQ8IUX4 373 aaKnown RBP10.84□□□□□ -0.67
IFT43-201ENST00000238628 PLBD2Q8NHP8 589 aa10.84□□□□□ -0.67
IFT43-201ENST00000238628 ISCA1Q9BUE6 129 aa10.84□□□□□ -0.67
IFT43-201ENST00000238628 ARHGAP39Q9C0H5 1083 aa10.84□□□□□ -0.67
IFT43-201ENST00000238628 CHPF2Q9P2E5 772 aa10.84□□□□□ -0.67
IFT43-201ENST00000238628 BIN2Q9UBW5 565 aaPredicted RBP10.84□□□□□ -0.67
IFT43-201ENST00000238628 LAS1LQ9Y4W2 734 aaKnown RBP10.84□□□□□ -0.67
IFT43-201ENST00000238628 USP17L3A6NCW0 530 aa10.83□□□□□ -0.68
IFT43-201ENST00000238628 USP17L4A6NCW7 530 aa10.83□□□□□ -0.68
IFT43-201ENST00000238628 UFL1O94874 794 aa10.83□□□□□ -0.68
IFT43-201ENST00000238628 SASH1O94885 1247 aa10.83□□□□□ -0.68
IFT43-201ENST00000238628 GNRH1P01148 92 aa10.83□□□□□ -0.68
IFT43-201ENST00000238628 CCL5P13501 91 aa10.83□□□□□ -0.68
IFT43-201ENST00000238628 NEUROD2Q15784 382 aa10.83□□□□□ -0.68
IFT43-201ENST00000238628 MAP3K11Q16584 847 aa10.83□□□□□ -0.68
IFT43-201ENST00000238628 KRT24Q2M2I5 525 aa10.83□□□□□ -0.68
IFT43-201ENST00000238628 USP17L1Q7RTZ2 530 aa10.83□□□□□ -0.68
IFT43-201ENST00000238628 IRS2Q9Y4H2 1338 aa10.83□□□□□ -0.68
IFT43-201ENST00000238628 UNCXA6NJT0 531 aa10.82□□□□□ -0.68
IFT43-201ENST00000238628 CHL1O00533 1208 aa10.82□□□□□ -0.68
IFT43-201ENST00000238628 IRS4O14654 1257 aaPredicted RBP10.82□□□□□ -0.68
IFT43-201ENST00000238628 WDHD1O75717 1129 aaPredicted RBP10.82□□□□□ -0.68
IFT43-201ENST00000238628 GRK4P32298 578 aa10.82□□□□□ -0.68
IFT43-201ENST00000238628 GJA5P36382 358 aa10.82□□□□□ -0.68
IFT43-201ENST00000238628 LACTBP83111 547 aaPredicted RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms