RNA–Protein interactions for RNA: ENST00000234179.6

PRKD3-201, Transcript of protein kinase D3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKD3, Length 5,900 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-201ENST00000234179 ANKRD13AQ8IZ07 590 aa2.95□□□□□ -1.94
PRKD3-201ENST00000234179 ZBTB38Q8NAP3 1195 aaPredicted RBP2.95□□□□□ -1.94
PRKD3-201ENST00000234179 ZNF296Q8WUU4 475 aaPredicted RBP2.95□□□□□ -1.94
PRKD3-201ENST00000234179 IGSF3O75054 1194 aa2.95□□□□□ -1.94
PRKD3-201ENST00000234179 UBXN2AP68543 259 aa2.95□□□□□ -1.94
PRKD3-201ENST00000234179 FMR1Q06787 632 aaKnown RBP eCLIP2.95□□□□□ -1.94
PRKD3-201ENST00000234179 SCARF1Q14162 830 aa2.95□□□□□ -1.94
PRKD3-201ENST00000234179 MCM10Q7L590 875 aa2.95□□□□□ -1.94
PRKD3-201ENST00000234179 GMLQ99445 158 aa2.95□□□□□ -1.94
PRKD3-201ENST00000234179 ANKIB1Q9P2G1 1089 aa2.95□□□□□ -1.94
PRKD3-201ENST00000234179 KDM3BQ7LBC6 1761 aa2.95□□□□□ -1.94
PRKD3-201ENST00000234179 FAM205AQ6ZU69 1335 aa2.95□□□□□ -1.94
PRKD3-201ENST00000234179 TESPA1A2RU30 521 aaPredicted RBP2.95□□□□□ -1.94
PRKD3-201ENST00000234179 IRS4O14654 1257 aaPredicted RBP2.95□□□□□ -1.94
PRKD3-201ENST00000234179 GTF2A2P52657 109 aa2.95□□□□□ -1.94
PRKD3-201ENST00000234179 ANGEL2Q5VTE6 544 aaKnown RBP2.95□□□□□ -1.94
PRKD3-201ENST00000234179 TTLL7Q6ZT98 887 aa2.95□□□□□ -1.94
PRKD3-201ENST00000234179 NGEFQ8N5V2 710 aa2.95□□□□□ -1.94
PRKD3-201ENST00000234179 PHACTR3Q96KR7 559 aa2.95□□□□□ -1.94
PRKD3-201ENST00000234179 TMOD2Q9NZR1 351 aa2.95□□□□□ -1.94
PRKD3-201ENST00000234179 GNAI1P63096 354 aa2.95□□□□□ -1.94
PRKD3-201ENST00000234179 HDLBPQ00341 1268 aaKnown RBP2.95□□□□□ -1.94
PRKD3-201ENST00000234179 DLGAP5Q15398 846 aa2.95□□□□□ -1.94
PRKD3-201ENST00000234179 HDGFL1Q5TGJ6 251 aa2.95□□□□□ -1.94
PRKD3-201ENST00000234179 FKBP1CQ5VVH2 108 aa2.95□□□□□ -1.94
PRKD3-201ENST00000234179 DCAF15Q66K64 600 aa2.95□□□□□ -1.94
PRKD3-201ENST00000234179 XAGE3Q8WTP9 111 aa2.95□□□□□ -1.94
PRKD3-201ENST00000234179 MYH16Q9H6N6 1097 aa2.95□□□□□ -1.94
PRKD3-201ENST00000234179 CWC25Q9NXE8 425 aaPredicted RBP2.95□□□□□ -1.94
PRKD3-201ENST00000234179 PTPN22Q9Y2R2 807 aa2.95□□□□□ -1.94
PRKD3-201ENST00000234179 SNPHO15079 494 aa2.94□□□□□ -1.94
PRKD3-201ENST00000234179 KCNQ3O43525 872 aa2.94□□□□□ -1.94
PRKD3-201ENST00000234179 FXR2P51116 673 aaKnown RBP eCLIP2.94□□□□□ -1.94
PRKD3-201ENST00000234179 SP3Q02447 781 aa2.94□□□□□ -1.94
PRKD3-201ENST00000234179 BSDC1Q9NW68 430 aaPredicted RBP2.94□□□□□ -1.94
PRKD3-201ENST00000234179 HDAC5Q9UQL6 1122 aa2.94□□□□□ -1.94
PRKD3-201ENST00000234179 MYL6BP14649 208 aa2.94□□□□□ -1.94
PRKD3-201ENST00000234179 ZNF804AQ7Z570 1209 aa2.94□□□□□ -1.94
PRKD3-201ENST00000234179 TBC1D22AQ8WUA7 517 aa2.94□□□□□ -1.94
PRKD3-201ENST00000234179 WNK4Q96J92 1243 aa2.94□□□□□ -1.94
PRKD3-201ENST00000234179 SUGT1Q9Y2Z0 365 aa2.94□□□□□ -1.94
PRKD3-201ENST00000234179 TRIM17Q9Y577 477 aa2.94□□□□□ -1.94
PRKD3-201ENST00000234179 NUP98P52948 1817 aa2.94□□□□□ -1.94
PRKD3-201ENST00000234179 RBBP6Q7Z6E9 1792 aaKnown RBP2.94□□□□□ -1.94
PRKD3-201ENST00000234179 YDJCA8MPS7 323 aa2.94□□□□□ -1.94
PRKD3-201ENST00000234179 ADM5C9JUS6 153 aa2.94□□□□□ -1.94
PRKD3-201ENST00000234179 CHL1O00533 1208 aa2.94□□□□□ -1.94
PRKD3-201ENST00000234179 CETPP11597 493 aa2.94□□□□□ -1.94
PRKD3-201ENST00000234179 IFNL1Q8IU54 200 aa2.94□□□□□ -1.94
PRKD3-201ENST00000234179 RPAP1Q9BWH6 1393 aaPredicted RBP2.94□□□□□ -1.94
PRKD3-201ENST00000234179 GPSM2P81274 684 aa2.94□□□□□ -1.94
PRKD3-201ENST00000234179 CCDC30Q5VVM6 783 aa2.94□□□□□ -1.94
PRKD3-201ENST00000234179 OTOP1Q7RTM1 612 aa2.94□□□□□ -1.94
PRKD3-201ENST00000234179 SAMD7Q7Z3H4 446 aa2.94□□□□□ -1.94
PRKD3-201ENST00000234179 ANKLE1Q8NAG6 615 aa2.94□□□□□ -1.94
PRKD3-201ENST00000234179 MRIQ9BWK5 157 aa2.94□□□□□ -1.94
PRKD3-201ENST00000234179 PLA2G12BQ9BX93 195 aa2.94□□□□□ -1.94
PRKD3-201ENST00000234179 STK31Q9BXU1 1019 aa2.94□□□□□ -1.94
PRKD3-201ENST00000234179 TBC1D2Q9BYX2 928 aa2.94□□□□□ -1.94
PRKD3-201ENST00000234179 CSADQ9Y600 493 aa2.94□□□□□ -1.94
PRKD3-201ENST00000234179 MAP4K4O95819 1239 aaPredicted RBP2.94□□□□□ -1.94
PRKD3-201ENST00000234179 KCNJ4P48050 445 aa2.94□□□□□ -1.94
PRKD3-201ENST00000234179 RIC3Q7Z5B4 369 aa2.94□□□□□ -1.94
PRKD3-201ENST00000234179 CCER1Q8TC90 406 aaPredicted RBP2.94□□□□□ -1.94
PRKD3-201ENST00000234179 DBNDD1Q9H9R9 158 aa2.94□□□□□ -1.94
PRKD3-201ENST00000234179 TSKSQ9UJT2 592 aa2.94□□□□□ -1.94
PRKD3-201ENST00000234179 HCLS1P14317 486 aaPredicted RBP2.93□□□□□ -1.94
PRKD3-201ENST00000234179 RBM26Q5T8P6 1007 aaKnown RBP2.93□□□□□ -1.94
PRKD3-201ENST00000234179 TRMT44Q8IYL2 757 aaKnown RBP2.93□□□□□ -1.94
PRKD3-201ENST00000234179 RIPK4P57078 832 aa2.93□□□□□ -1.94
PRKD3-201ENST00000234179 WDR43Q15061 677 aaKnown RBP eCLIP2.93□□□□□ -1.94
PRKD3-201ENST00000234179 SLC4A8Q2Y0W8 1093 aa2.93□□□□□ -1.94
PRKD3-201ENST00000234179 SLC9C1Q4G0N8 1177 aa2.93□□□□□ -1.94
PRKD3-201ENST00000234179 DACT2Q5SW24 774 aa2.93□□□□□ -1.94
PRKD3-201ENST00000234179 LCE2DQ5TA82 110 aaPredicted RBP2.93□□□□□ -1.94
PRKD3-201ENST00000234179 LRP10Q7Z4F1 713 aa2.93□□□□□ -1.94
PRKD3-201ENST00000234179 RUNDC1Q96C34 613 aa2.93□□□□□ -1.94
PRKD3-201ENST00000234179 ZBED3Q96IU2 234 aaPredicted RBP2.93□□□□□ -1.94
PRKD3-201ENST00000234179 TRIM47Q96LD4 638 aa2.93□□□□□ -1.94
PRKD3-201ENST00000234179 IFT57Q9NWB7 429 aa2.93□□□□□ -1.94
PRKD3-201ENST00000234179 ANGEL1Q9UNK9 670 aaKnown RBP2.93□□□□□ -1.94
PRKD3-201ENST00000234179 LAMB2P55268 1798 aa2.93□□□□□ -1.94
PRKD3-201ENST00000234179 COL4A5P29400 1685 aa2.93□□□□□ -1.94
PRKD3-201ENST00000234179 CACNA1SQ13698 1873 aa2.93□□□□□ -1.94
PRKD3-201ENST00000234179 EIF2S2P20042 333 aaKnown RBP2.93□□□□□ -1.94
PRKD3-201ENST00000234179 SLAIN1Q8ND83 568 aa2.93□□□□□ -1.94
PRKD3-201ENST00000234179 GTF3C2Q8WUA4 911 aaPredicted RBP2.93□□□□□ -1.94
PRKD3-201ENST00000234179 TAOK2Q9UL54 1235 aa2.93□□□□□ -1.94
PRKD3-201ENST00000234179 TCERG1O14776 1098 aaKnown RBP2.93□□□□□ -1.94
PRKD3-201ENST00000234179 PDIA6Q15084 440 aa2.93□□□□□ -1.94
PRKD3-201ENST00000234179 TAF1CQ15572 869 aaPredicted RBP2.93□□□□□ -1.94
PRKD3-201ENST00000234179 OLFM4Q6UX06 510 aa2.93□□□□□ -1.94
PRKD3-201ENST00000234179 ZNF333Q96JL9 665 aa2.93□□□□□ -1.94
PRKD3-201ENST00000234179 MPHOSPH8Q99549 860 aa2.93□□□□□ -1.94
PRKD3-201ENST00000234179 METTL22Q9BUU2 404 aaPredicted RBP2.93□□□□□ -1.94
PRKD3-201ENST00000234179 POLLQ9UGP5 575 aa2.93□□□□□ -1.94
PRKD3-201ENST00000234179 SERPINA10Q9UK55 444 aa2.93□□□□□ -1.94
PRKD3-201ENST00000234179 SLC45A1Q9Y2W3 748 aa2.93□□□□□ -1.94
PRKD3-201ENST00000234179 UBE2Q2LH0YL09 131 aa2.92□□□□□ -1.94
PRKD3-201ENST00000234179 RIMBP2O15034 1052 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms