RNA–Protein interactions for RNA: ENST00000232888.6

RRP9-201, Transcript of ribosomal RNA processing 9, U3 small nucleolar RNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP9, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP9-201ENST00000232888 K7ELQ4 463 aaPredicted RBP28.6■■■□□ 2.17
RRP9-201ENST00000232888 MCM2P49736 904 aa28.6■■■□□ 2.17
RRP9-201ENST00000232888 PTH1RQ03431 593 aa28.6■■■□□ 2.17
RRP9-201ENST00000232888 PALD1Q9ULE6 856 aa28.6■■■□□ 2.17
RRP9-201ENST00000232888 GRAPQ13588 217 aa28.59■■■□□ 2.17
RRP9-201ENST00000232888 GRAPLQ8TC17 118 aaPredicted RBP28.59■■■□□ 2.17
RRP9-201ENST00000232888 ANTXR1Q9H6X2 564 aa28.59■■■□□ 2.17
RRP9-201ENST00000232888 EP400Q96L91 3159 aa28.59■■■□□ 2.17
RRP9-201ENST00000232888 DDR1Q08345 913 aa28.58■■■□□ 2.17
RRP9-201ENST00000232888 NECTIN1Q15223 517 aa28.58■■■□□ 2.17
RRP9-201ENST00000232888 CCDC24Q8N4L8 307 aa28.58■■■□□ 2.17
RRP9-201ENST00000232888 CAMKK2Q96RR4 588 aa28.58■■■□□ 2.17
RRP9-201ENST00000232888 COL4A1P02462 1669 aa28.58■■■□□ 2.17
RRP9-201ENST00000232888 TNRC6CQ9HCJ0 1690 aaKnown RBP28.58■■■□□ 2.17
RRP9-201ENST00000232888 RNF20Q5VTR2 975 aa28.58■■■□□ 2.17
RRP9-201ENST00000232888 GNL3LQ9NVN8 582 aaKnown RBP28.58■■■□□ 2.17
RRP9-201ENST00000232888 KLRG2A4D1S0 409 aaPredicted RBP28.57■■■□□ 2.16
RRP9-201ENST00000232888 ZKSCAN1P17029 563 aaPredicted RBP28.57■■■□□ 2.16
RRP9-201ENST00000232888 ZNF589Q86UQ0 364 aaPredicted RBP28.57■■■□□ 2.16
RRP9-201ENST00000232888 RPGRQ92834 1020 aaKnown RBP28.57■■■□□ 2.16
RRP9-201ENST00000232888 RBM8AQ9Y5S9 174 aaKnown RBP28.57■■■□□ 2.16
RRP9-201ENST00000232888 SNX14Q9Y5W7 946 aa28.57■■■□□ 2.16
RRP9-201ENST00000232888 ZBTB22O15209 634 aa28.56■■■□□ 2.16
RRP9-201ENST00000232888 KCNJ4P48050 445 aa28.56■■■□□ 2.16
RRP9-201ENST00000232888 SPATA5Q8NB90 893 aa28.56■■■□□ 2.16
RRP9-201ENST00000232888 HMG20BQ9P0W2 317 aa28.56■■■□□ 2.16
RRP9-201ENST00000232888 ZNF804BA4D1E1 1349 aa28.56■■■□□ 2.16
RRP9-201ENST00000232888 AKAP11Q9UKA4 1901 aa28.56■■■□□ 2.16
RRP9-201ENST00000232888 CAVIN4Q5BKX8 364 aa28.55■■■□□ 2.16
RRP9-201ENST00000232888 RBM17Q96I25 401 aaKnown RBP28.55■■■□□ 2.16
RRP9-201ENST00000232888 U3KPZ7 1027 aaPredicted RBP28.55■■■□□ 2.16
RRP9-201ENST00000232888 PNPLA7Q6ZV29 1317 aa28.55■■■□□ 2.16
RRP9-201ENST00000232888 A0A1B0GUL6 1792 aa28.55■■■□□ 2.16
RRP9-201ENST00000232888 CYP2E1P05181 493 aaPredicted RBP28.54■■■□□ 2.16
RRP9-201ENST00000232888 HOXA10P31260 410 aaPredicted RBP28.54■■■□□ 2.16
RRP9-201ENST00000232888 NEK4P51957 841 aa28.54■■■□□ 2.16
RRP9-201ENST00000232888 TM6SF1Q9BZW5 370 aa28.54■■■□□ 2.16
RRP9-201ENST00000232888 CD2BP2O95400 341 aaKnown RBP28.54■■■□□ 2.16
RRP9-201ENST00000232888 APPBP2Q92624 585 aa28.54■■■□□ 2.16
RRP9-201ENST00000232888 DSCC1Q9BVC3 393 aa28.54■■■□□ 2.16
RRP9-201ENST00000232888 RASGRF1Q13972 1273 aa28.53■■■□□ 2.16
RRP9-201ENST00000232888 TSGA10IPQ3SY00 556 aa28.53■■■□□ 2.16
RRP9-201ENST00000232888 PRPF40BQ6NWY9 871 aaKnown RBP28.53■■■□□ 2.16
RRP9-201ENST00000232888 PI16Q6UXB8 463 aa28.53■■■□□ 2.16
RRP9-201ENST00000232888 SNAP23O00161 211 aa28.52■■■□□ 2.16
RRP9-201ENST00000232888 BCAMP50895 628 aa28.52■■■□□ 2.16
RRP9-201ENST00000232888 SF3B2Q13435 895 aaKnown RBP28.52■■■□□ 2.16
RRP9-201ENST00000232888 UBE3CQ15386 1083 aa28.52■■■□□ 2.16
RRP9-201ENST00000232888 CREB3L3Q68CJ9 461 aa28.52■■■□□ 2.16
RRP9-201ENST00000232888 CRAMP1Q96RY5 1269 aa28.52■■■□□ 2.16
RRP9-201ENST00000232888 BRIP1Q9BX63 1249 aa28.52■■■□□ 2.16
RRP9-201ENST00000232888 STK32BQ9NY57 414 aa28.52■■■□□ 2.16
RRP9-201ENST00000232888 SEMA3EO15041 775 aa28.51■■■□□ 2.15
RRP9-201ENST00000232888 BBOX1O75936 387 aa28.51■■■□□ 2.15
RRP9-201ENST00000232888 TMC4Q7Z404 712 aa28.51■■■□□ 2.15
RRP9-201ENST00000232888 RASEFQ8IZ41 740 aa28.51■■■□□ 2.15
RRP9-201ENST00000232888 SEC62Q99442 399 aaKnown RBP28.51■■■□□ 2.15
RRP9-201ENST00000232888 TAF1P21675 1872 aa28.5■■■□□ 2.15
RRP9-201ENST00000232888 EZH2Q15910 746 aaKnown RBP28.5■■■□□ 2.15
RRP9-201ENST00000232888 SLC15A2Q16348 729 aa28.5■■■□□ 2.15
RRP9-201ENST00000232888 LEMD3Q9Y2U8 911 aa28.5■■■□□ 2.15
RRP9-201ENST00000232888 MAST3O60307 1309 aa28.5■■■□□ 2.15
RRP9-201ENST00000232888 NRXN2Q9P2S2 1712 aa28.5■■■□□ 2.15
RRP9-201ENST00000232888 ADD2P35612 726 aa28.5■■■□□ 2.15
RRP9-201ENST00000232888 BAG6P46379 1132 aa28.5■■■□□ 2.15
RRP9-201ENST00000232888 EN1Q05925 392 aaPredicted RBP28.5■■■□□ 2.15
RRP9-201ENST00000232888 FBXO33Q7Z6M2 555 aa28.5■■■□□ 2.15
RRP9-201ENST00000232888 PIH1D3Q9NQM4 214 aaKnown RBP28.5■■■□□ 2.15
RRP9-201ENST00000232888 PARP3Q9Y6F1 533 aa28.5■■■□□ 2.15
RRP9-201ENST00000232888 SLC27A2O14975 620 aa28.49■■■□□ 2.15
RRP9-201ENST00000232888 PSMA5P28066 241 aa28.49■■■□□ 2.15
RRP9-201ENST00000232888 MAP3K12Q12852 859 aa28.49■■■□□ 2.15
RRP9-201ENST00000232888 PDS5AQ29RF7 1337 aaKnown RBP28.48■■■□□ 2.15
RRP9-201ENST00000232888 KRT32Q14532 448 aa28.48■■■□□ 2.15
RRP9-201ENST00000232888 WASHC4Q2M389 1173 aa28.48■■■□□ 2.15
RRP9-201ENST00000232888 VPS37DQ86XT2 251 aa28.48■■■□□ 2.15
RRP9-201ENST00000232888 OSBP2Q969R2 916 aa28.48■■■□□ 2.15
RRP9-201ENST00000232888 DENND2AQ9ULE3 1009 aa28.48■■■□□ 2.15
RRP9-201ENST00000232888 CHGBP05060 677 aa28.47■■■□□ 2.15
RRP9-201ENST00000232888 SLC9C2Q5TAH2 1124 aa28.47■■■□□ 2.15
RRP9-201ENST00000232888 CCDC129Q6ZRS4 1044 aa28.47■■■□□ 2.15
RRP9-201ENST00000232888 FAM84BQ96KN1 310 aaPredicted RBP28.47■■■□□ 2.15
RRP9-201ENST00000232888 XDHP47989 1333 aa28.46■■■□□ 2.15
RRP9-201ENST00000232888 HSP90AA1P07900 732 aaKnown RBP28.46■■■□□ 2.15
RRP9-201ENST00000232888 QSER1Q2KHR3 1735 aa28.46■■■□□ 2.15
RRP9-201ENST00000232888 IDH1O75874 414 aaKnown RBP28.45■■■□□ 2.15
RRP9-201ENST00000232888 MMP10P09238 476 aa28.45■■■□□ 2.15
RRP9-201ENST00000232888 ZSWIM6Q9HCJ5 1215 aa28.45■■■□□ 2.15
RRP9-201ENST00000232888 MYH7P12883 1935 aa28.45■■■□□ 2.14
RRP9-201ENST00000232888 M0R2C6 588 aa28.45■■■□□ 2.14
RRP9-201ENST00000232888 PDE6AP16499 860 aa28.45■■■□□ 2.14
RRP9-201ENST00000232888 PDE6BP35913 854 aa28.45■■■□□ 2.14
RRP9-201ENST00000232888 GYG1P46976 350 aa28.45■■■□□ 2.14
RRP9-201ENST00000232888 C15orf52Q6ZUT6 534 aaKnown RBP28.45■■■□□ 2.14
RRP9-201ENST00000232888 SLKQ9H2G2 1235 aaPredicted RBP28.45■■■□□ 2.14
RRP9-201ENST00000232888 CIZ1Q9ULV3 898 aaPredicted RBP28.45■■■□□ 2.14
RRP9-201ENST00000232888 IGSF3O75054 1194 aa28.44■■■□□ 2.14
RRP9-201ENST00000232888 HSPD1P10809 573 aaKnown RBP28.44■■■□□ 2.14
RRP9-201ENST00000232888 CTNNA3Q9UI47 895 aa28.44■■■□□ 2.14
RRP9-201ENST00000232888 CYP46A1Q9Y6A2 500 aa28.44■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms