RNA–Protein interactions for RNA: ENST00000228437.9

PRDM4-201, Transcript of PR/SET domain 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PRDM4, Length 4,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-201ENST00000228437 MAP4K1Q92918 833 aa16.74■□□□□ 0.27
PRDM4-201ENST00000228437 KIAA0232Q92628 1395 aa16.73■□□□□ 0.27
PRDM4-201ENST00000228437 ZNF827Q17R98 1081 aa16.73■□□□□ 0.27
PRDM4-201ENST00000228437 CDC42BPBQ9Y5S2 1711 aa16.73■□□□□ 0.27
PRDM4-201ENST00000228437 SLC39A6Q13433 755 aa16.73■□□□□ 0.27
PRDM4-201ENST00000228437 CLIC4Q9Y696 253 aa16.73■□□□□ 0.27
PRDM4-201ENST00000228437 AOX1Q06278 1338 aa16.73■□□□□ 0.27
PRDM4-201ENST00000228437 MYOM2P54296 1465 aa16.73■□□□□ 0.27
PRDM4-201ENST00000228437 PREX2Q70Z35 1606 aa16.73■□□□□ 0.27
PRDM4-201ENST00000228437 DNA2P51530 1060 aa16.73■□□□□ 0.27
PRDM4-201ENST00000228437 PNOCQ13519 176 aa16.73■□□□□ 0.27
PRDM4-201ENST00000228437 GRM8O00222 908 aa16.72■□□□□ 0.27
PRDM4-201ENST00000228437 IPO7O95373 1038 aaKnown RBP16.72■□□□□ 0.27
PRDM4-201ENST00000228437 IQCB1Q15051 598 aa16.72■□□□□ 0.27
PRDM4-201ENST00000228437 CRACR2AQ9BSW2 395 aa16.72■□□□□ 0.27
PRDM4-201ENST00000228437 CYP2C19P33261 490 aa16.72■□□□□ 0.27
PRDM4-201ENST00000228437 RESTQ13127 1097 aa16.72■□□□□ 0.27
PRDM4-201ENST00000228437 TOB2Q14106 344 aaPredicted RBP16.72■□□□□ 0.27
PRDM4-201ENST00000228437 FILIP1LQ4L180 1135 aa16.72■□□□□ 0.27
PRDM4-201ENST00000228437 SUCLG2Q96I99 432 aa16.72■□□□□ 0.27
PRDM4-201ENST00000228437 RRP15Q9Y3B9 282 aaKnown RBP16.72■□□□□ 0.27
PRDM4-201ENST00000228437 TCHHQ07283 1943 aa16.72■□□□□ 0.27
PRDM4-201ENST00000228437 MATR3P43243 847 aaKnown RBP eCLIP16.72■□□□□ 0.27
PRDM4-201ENST00000228437 AFMP43652 599 aa16.72■□□□□ 0.27
PRDM4-201ENST00000228437 NAP1L1P55209 391 aaKnown RBP16.72■□□□□ 0.27
PRDM4-201ENST00000228437 TFCP2Q12800 502 aa16.72■□□□□ 0.27
PRDM4-201ENST00000228437 DHX32Q7L7V1 743 aaKnown RBP16.72■□□□□ 0.27
PRDM4-201ENST00000228437 CAPZA3Q96KX2 299 aa16.72■□□□□ 0.27
PRDM4-201ENST00000228437 DBNDD2Q9BQY9 259 aa16.72■□□□□ 0.27
PRDM4-201ENST00000228437 MCMDC2Q4G0Z9 681 aa16.72■□□□□ 0.27
PRDM4-201ENST00000228437 TTC5Q8N0Z6 440 aa16.72■□□□□ 0.27
PRDM4-201ENST00000228437 DHX8Q14562 1220 aaKnown RBP16.71■□□□□ 0.27
PRDM4-201ENST00000228437 ARMCX5Q6P1M9 558 aa16.71■□□□□ 0.27
PRDM4-201ENST00000228437 NUP133Q8WUM0 1156 aa16.71■□□□□ 0.27
PRDM4-201ENST00000228437 PARD6BQ9BYG5 372 aa16.71■□□□□ 0.27
PRDM4-201ENST00000228437 GPHNQ9NQX3 736 aaPredicted RBP16.71■□□□□ 0.27
PRDM4-201ENST00000228437 FANCLQ9NW38 375 aa16.71■□□□□ 0.27
PRDM4-201ENST00000228437 FEZ2Q9UHY8 353 aaPredicted RBP16.71■□□□□ 0.27
PRDM4-201ENST00000228437 CHMP4BP1P59074 171 aa16.71■□□□□ 0.27
PRDM4-201ENST00000228437 MYL5Q02045 173 aa16.71■□□□□ 0.27
PRDM4-201ENST00000228437 CCDC102BQ68D86 513 aa16.71■□□□□ 0.26
PRDM4-201ENST00000228437 KCNG4Q8TDN1 519 aa16.71■□□□□ 0.26
PRDM4-201ENST00000228437 FAM107BQ9H098 131 aa16.71■□□□□ 0.26
PRDM4-201ENST00000228437 ARHGEF40Q8TER5 1519 aa16.71■□□□□ 0.26
PRDM4-201ENST00000228437 PLA2G4AP47712 749 aa16.7■□□□□ 0.26
PRDM4-201ENST00000228437 ST3GAL1Q11201 340 aa16.7■□□□□ 0.26
PRDM4-201ENST00000228437 ZNF446Q9NWS9 450 aa16.7■□□□□ 0.26
PRDM4-201ENST00000228437 PPP2R2CQ9Y2T4 447 aa16.7■□□□□ 0.26
PRDM4-201ENST00000228437 ATP7AQ04656 1500 aa16.7■□□□□ 0.26
PRDM4-201ENST00000228437 IFIT1P09914 478 aaKnown RBP16.7■□□□□ 0.26
PRDM4-201ENST00000228437 TIMM10P62072 90 aa16.7■□□□□ 0.26
PRDM4-201ENST00000228437 PNPLA6Q8IY17 1366 aa16.7■□□□□ 0.26
PRDM4-201ENST00000228437 ADAM21Q9UKJ8 722 aa16.7■□□□□ 0.26
PRDM4-201ENST00000228437 GPIHBP1Q8IV16 184 aa16.69■□□□□ 0.26
PRDM4-201ENST00000228437 DHX40Q8IX18 779 aaKnown RBP16.69■□□□□ 0.26
PRDM4-201ENST00000228437 IRX2Q9BZI1 471 aaPredicted RBP16.69■□□□□ 0.26
PRDM4-201ENST00000228437 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.69■□□□□ 0.26
PRDM4-201ENST00000228437 IMPACTQ9P2X3 320 aa16.69■□□□□ 0.26
PRDM4-201ENST00000228437 TMEM232C9JQI7 657 aa16.69■□□□□ 0.26
PRDM4-201ENST00000228437 CYP21A2P08686 494 aa16.69■□□□□ 0.26
PRDM4-201ENST00000228437 LONRF2Q1L5Z9 754 aa16.69■□□□□ 0.26
PRDM4-201ENST00000228437 CTR9Q6PD62 1173 aa16.69■□□□□ 0.26
PRDM4-201ENST00000228437 LRRC59Q96AG4 307 aaKnown RBP16.69■□□□□ 0.26
PRDM4-201ENST00000228437 POGZQ7Z3K3 1410 aa16.69■□□□□ 0.26
PRDM4-201ENST00000228437 MYOM1P52179 1685 aa16.69■□□□□ 0.26
PRDM4-201ENST00000228437 CDC25BP30305 580 aa16.69■□□□□ 0.26
PRDM4-201ENST00000228437 SART3Q15020 963 aaKnown RBP16.69■□□□□ 0.26
PRDM4-201ENST00000228437 DHX58Q96C10 678 aa16.69■□□□□ 0.26
PRDM4-201ENST00000228437 FAN1Q9Y2M0 1017 aa16.69■□□□□ 0.26
PRDM4-201ENST00000228437 CCDC70Q6NSX1 233 aa16.69■□□□□ 0.26
PRDM4-201ENST00000228437 ANKRD20A12PQ8NF67 263 aa16.69■□□□□ 0.26
PRDM4-201ENST00000228437 NUP88Q99567 741 aaPredicted RBP16.69■□□□□ 0.26
PRDM4-201ENST00000228437 MTMR7Q9Y216 660 aa16.69■□□□□ 0.26
PRDM4-201ENST00000228437 A0A087WZG4 1122 aa16.68■□□□□ 0.26
PRDM4-201ENST00000228437 EFCAB8A8MWE9 144 aa16.68■□□□□ 0.26
PRDM4-201ENST00000228437 COBLO75128 1261 aa16.68■□□□□ 0.26
PRDM4-201ENST00000228437 IMMTQ16891 758 aaKnown RBP16.68■□□□□ 0.26
PRDM4-201ENST00000228437 NYAP1Q6ZVC0 841 aa16.68■□□□□ 0.26
PRDM4-201ENST00000228437 CLIC6Q96NY7 704 aa16.68■□□□□ 0.26
PRDM4-201ENST00000228437 ALG1Q9BT22 464 aa16.68■□□□□ 0.26
PRDM4-201ENST00000228437 PSME1Q06323 249 aa16.68■□□□□ 0.26
PRDM4-201ENST00000228437 PROSER3Q2NL68 480 aa16.68■□□□□ 0.26
PRDM4-201ENST00000228437 PLEKHO1Q53GL0 409 aaPredicted RBP16.68■□□□□ 0.26
PRDM4-201ENST00000228437 RNF17Q9BXT8 1623 aaKnown RBP16.68■□□□□ 0.26
PRDM4-201ENST00000228437 CTAGE15A4D2H0 777 aa16.68■□□□□ 0.26
PRDM4-201ENST00000228437 IVLP07476 585 aa16.68■□□□□ 0.26
PRDM4-201ENST00000228437 CCDC175P0C221 793 aa16.68■□□□□ 0.26
PRDM4-201ENST00000228437 CTAGE8P0CG41 777 aa16.68■□□□□ 0.26
PRDM4-201ENST00000228437 NLRP12P59046 1061 aa16.68■□□□□ 0.26
PRDM4-201ENST00000228437 CTAGE6Q86UF2 777 aa16.68■□□□□ 0.26
PRDM4-201ENST00000228437 CTAGE4Q8IX94 777 aa16.68■□□□□ 0.26
PRDM4-201ENST00000228437 FHOD1Q9Y613 1164 aa16.68■□□□□ 0.26
PRDM4-201ENST00000228437 TULP4Q9NRJ4 1543 aa16.67■□□□□ 0.26
PRDM4-201ENST00000228437 A0A1B0GUL7 405 aa16.67■□□□□ 0.26
PRDM4-201ENST00000228437 TAF5LO75529 589 aa16.67■□□□□ 0.26
PRDM4-201ENST00000228437 HMGB1P09429 215 aaKnown RBP16.67■□□□□ 0.26
PRDM4-201ENST00000228437 PFKFB1P16118 471 aa16.67■□□□□ 0.26
PRDM4-201ENST00000228437 BEND3Q5T5X7 828 aa16.67■□□□□ 0.26
PRDM4-201ENST00000228437 PRAMEF22A3QJZ6 481 aa16.67■□□□□ 0.26
PRDM4-201ENST00000228437 TTC39AQ5SRH9 613 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms